RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 J3KT08 172 aa9.07□□□□□ -0.96
TPM3-206ENST00000330188 DPH3Q96FX2 82 aa9.07□□□□□ -0.96
TPM3-206ENST00000330188 H0Y9J4 135 aa9.07□□□□□ -0.96
TPM3-206ENST00000330188 PANO1I0J062 215 aa9.07□□□□□ -0.96
TPM3-206ENST00000330188 RPS28P62857 69 aaKnown RBP9.06□□□□□ -0.96
TPM3-206ENST00000330188 TENM2Q9NT68 2774 aa9.06□□□□□ -0.96
TPM3-206ENST00000330188 VPS13DQ5THJ4 4388 aa9.05□□□□□ -0.96
TPM3-206ENST00000330188 H7BZZ5 65 aa9.05□□□□□ -0.96
TPM3-206ENST00000330188 LINC00474Q9P2X8 69 aa9.05□□□□□ -0.96
TPM3-206ENST00000330188 SNURFQ9Y675 71 aa9.05□□□□□ -0.96
TPM3-206ENST00000330188 UBE2AP49459 152 aa9.04□□□□□ -0.96
TPM3-206ENST00000330188 DSCR10P59022 87 aa9.04□□□□□ -0.96
TPM3-206ENST00000330188 SPRR1BP22528 89 aa9.04□□□□□ -0.96
TPM3-206ENST00000330188 OCR1Q9BZK8 76 aa9.04□□□□□ -0.96
TPM3-206ENST00000330188 PRKDCP78527 4128 aaKnown RBP9.01□□□□□ -0.97
TPM3-206ENST00000330188 K7EQZ3 153 aa9□□□□□ -0.97
TPM3-206ENST00000330188 SPACA4Q8TDM5 124 aa9□□□□□ -0.97
TPM3-206ENST00000330188 FAM236DA0A1B0GTK5 79 aa8.99□□□□□ -0.97
TPM3-206ENST00000330188 FAM236CP0DP71 79 aa8.99□□□□□ -0.97
TPM3-206ENST00000330188 TMEM254Q8TBM7 123 aa8.99□□□□□ -0.97
TPM3-206ENST00000330188 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.99□□□□□ -0.97
TPM3-206ENST00000330188 KRTAP13-1Q8IUC0 172 aa8.99□□□□□ -0.97
TPM3-206ENST00000330188 A0A087WSZ3 146 aa8.98□□□□□ -0.97
TPM3-206ENST00000330188 A0A087WTM6 91 aa8.98□□□□□ -0.97
TPM3-206ENST00000330188 OXTP01178 125 aa8.98□□□□□ -0.97
TPM3-206ENST00000330188 NDUFC1O43677 76 aa8.96□□□□□ -0.98
TPM3-206ENST00000330188 FAM30AQ9NZY2 134 aa8.95□□□□□ -0.98
TPM3-206ENST00000330188 DEFB116Q30KQ4 102 aa8.95□□□□□ -0.98
TPM3-206ENST00000330188 A0A0U1RQV1 116 aa8.94□□□□□ -0.98
TPM3-206ENST00000330188 Q6ZR54 194 aa8.93□□□□□ -0.98
TPM3-206ENST00000330188 RTL8CO15255 209 aa8.92□□□□□ -0.98
TPM3-206ENST00000330188 HECTD4Q9Y4D8 3996 aa8.91□□□□□ -0.98
TPM3-206ENST00000330188 SRRM2Q9UQ35 2752 aaKnown RBP8.91□□□□□ -0.98
TPM3-206ENST00000330188 HCG22E2RYF7 251 aa8.91□□□□□ -0.98
TPM3-206ENST00000330188 DNAH2Q9P225 4427 aa8.91□□□□□ -0.98
TPM3-206ENST00000330188 KMT2AQ03164 3969 aa8.91□□□□□ -0.98
TPM3-206ENST00000330188 DNAH17Q9UFH2 4485 aa8.9□□□□□ -0.98
TPM3-206ENST00000330188 LCE6AA0A183 80 aa8.9□□□□□ -0.99
TPM3-206ENST00000330188 SERP1Q9Y6X1 66 aa8.89□□□□□ -0.99
TPM3-206ENST00000330188 RPL37AP61513 92 aaKnown RBP8.88□□□□□ -0.99
TPM3-206ENST00000330188 LINC00472Q9H8W2 130 aa8.86□□□□□ -0.99
TPM3-206ENST00000330188 PLAC8Q9NZF1 115 aa8.86□□□□□ -0.99
TPM3-206ENST00000330188 DNHD1Q96M86 4753 aa8.85□□□□□ -0.99
TPM3-206ENST00000330188 MEGF8Q7Z7M0 2845 aa8.85□□□□□ -0.99
TPM3-206ENST00000330188 ATP5EP56381 51 aaPredicted RBP8.85□□□□□ -0.99
TPM3-206ENST00000330188 LINC00483Q53H64 154 aa8.84□□□□□ -0.99
TPM3-206ENST00000330188 PSORS1C2Q9UIG4 136 aa8.84□□□□□ -0.99
TPM3-206ENST00000330188 IGLV5-52A0A0A0MRZ9 124 aa8.84□□□□□ -0.99
TPM3-206ENST00000330188 WFDC13Q8IUB5 93 aa8.84□□□□□ -0.99
TPM3-206ENST00000330188 DNAH8Q96JB1 4490 aa8.83□□□□□ -1
TPM3-206ENST00000330188 IGLV9-49A0A0B4J1Y8 123 aa8.83□□□□□ -1
TPM3-206ENST00000330188 C1orf134Q5TEV5 83 aa8.83□□□□□ -1
TPM3-206ENST00000330188 KRTAP29-1A8MX34 341 aaPredicted RBP8.82□□□□□ -1
TPM3-206ENST00000330188 PRR15Q8IV56 129 aa8.82□□□□□ -1
TPM3-206ENST00000330188 A8MWP4 228 aa8.81□□□□□ -1
TPM3-206ENST00000330188 SVIPQ8NHG7 77 aa8.81□□□□□ -1
TPM3-206ENST00000330188 ZCCHC13Q8WW36 166 aaKnown RBP8.81□□□□□ -1
TPM3-206ENST00000330188 C5orf47Q569G3 176 aa8.8□□□□□ -1
TPM3-206ENST00000330188 Q5XG85 94 aa8.8□□□□□ -1
TPM3-206ENST00000330188 ZNF706Q9Y5V0 76 aaPredicted RBP8.8□□□□□ -1
TPM3-206ENST00000330188 WWC2-AS2Q96NR7 200 aa8.78□□□□□ -1
TPM3-206ENST00000330188 ZNF861PO60384 105 aa8.78□□□□□ -1
TPM3-206ENST00000330188 FRAS1Q86XX4 4008 aa8.78□□□□□ -1
TPM3-206ENST00000330188 FBN3Q75N90 2809 aa8.77□□□□□ -1
TPM3-206ENST00000330188 LY6G6CO95867 125 aa8.77□□□□□ -1.01
TPM3-206ENST00000330188 CASC2Q6XLA1 102 aa8.77□□□□□ -1.01
TPM3-206ENST00000330188 Q96NJ1 140 aa8.76□□□□□ -1.01
TPM3-206ENST00000330188 DNAH6Q9C0G6 4158 aa8.74□□□□□ -1.01
TPM3-206ENST00000330188 C4orf26Q17RF5 130 aa8.74□□□□□ -1.01
TPM3-206ENST00000330188 ANAPC11Q9NYG5 84 aa8.74□□□□□ -1.01
TPM3-206ENST00000330188 MOBPQ13875 183 aa8.74□□□□□ -1.01
TPM3-206ENST00000330188 HRCT1Q6UXD1 115 aa8.74□□□□□ -1.01
TPM3-206ENST00000330188 MMP24-AS1A0A0U1RRL7 71 aa8.72□□□□□ -1.01
TPM3-206ENST00000330188 KRTAP21-3Q3LHN1 58 aa8.72□□□□□ -1.01
TPM3-206ENST00000330188 SMIM26A0A096LP01 95 aa8.71□□□□□ -1.01
TPM3-206ENST00000330188 DNAH5Q8TE73 4624 aa8.71□□□□□ -1.02
TPM3-206ENST00000330188 NDUFB1O75438 58 aa8.7□□□□□ -1.02
TPM3-206ENST00000330188 IGLV7-43P04211 117 aa8.69□□□□□ -1.02
TPM3-206ENST00000330188 MP68P56378 58 aa8.69□□□□□ -1.02
TPM3-206ENST00000330188 FP248Q71RG6 208 aaPredicted RBP8.69□□□□□ -1.02
TPM3-206ENST00000330188 TGP01266 2768 aa8.68□□□□□ -1.02
TPM3-206ENST00000330188 DNAH11Q96DT5 4516 aa8.68□□□□□ -1.02
TPM3-206ENST00000330188 FAM229BQ4G0N7 80 aa8.68□□□□□ -1.02
TPM3-206ENST00000330188 hDV103S1A0JD37 113 aa8.67□□□□□ -1.02
TPM3-206ENST00000330188 H0Y9P7 68 aa8.67□□□□□ -1.02
TPM3-206ENST00000330188 KRTAP10-2P60368 255 aa8.67□□□□□ -1.02
TPM3-206ENST00000330188 LINC00208Q96KT6 92 aa8.66□□□□□ -1.02
TPM3-206ENST00000330188 TRAV22A0A0B4J277 110 aa8.66□□□□□ -1.02
TPM3-206ENST00000330188 ALMS1Q8TCU4 4167 aa8.65□□□□□ -1.02
TPM3-206ENST00000330188 ASB16-AS1Q495Z4 193 aa8.65□□□□□ -1.02
TPM3-206ENST00000330188 CIRBP-AS1Q8TBR5 109 aa8.65□□□□□ -1.03
TPM3-206ENST00000330188 H3BPC8 53 aa8.64□□□□□ -1.03
TPM3-206ENST00000330188 C8orf17Q9NRJ1 99 aa8.63□□□□□ -1.03
TPM3-206ENST00000330188 A0A1B0GVX0 72 aa8.62□□□□□ -1.03
TPM3-206ENST00000330188 CYP4F30PQ9H0H9 118 aa8.62□□□□□ -1.03
TPM3-206ENST00000330188 C1orf64Q8NEQ6 169 aa8.61□□□□□ -1.03
TPM3-206ENST00000330188 IGHV6-1A0A0B4J1U7 121 aa8.6□□□□□ -1.03
TPM3-206ENST00000330188 PRR4Q16378 134 aa8.59□□□□□ -1.03
TPM3-206ENST00000330188 HYDINQ4G0P3 5121 aa8.58□□□□□ -1.04
TPM3-206ENST00000330188 CDK2AP2O75956 126 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms