RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 STARD9Q9P2P6 4700 aa10.14□□□□□ -0.79
USHBP1-202ENST00000324554 A0A0G2JQZ4 141 aa10.14□□□□□ -0.79
USHBP1-202ENST00000324554 A0A1W2PNN7 141 aa10.14□□□□□ -0.79
USHBP1-202ENST00000324554 DSCR10P59022 87 aa10.13□□□□□ -0.79
USHBP1-202ENST00000324554 HIGD2AQ9BW72 106 aa10.13□□□□□ -0.79
USHBP1-202ENST00000324554 FAM30AQ9NZY2 134 aa10.13□□□□□ -0.79
USHBP1-202ENST00000324554 DYNC2H1Q8NCM8 4307 aaKnown RBP10.13□□□□□ -0.79
USHBP1-202ENST00000324554 NUPR2A6NF83 97 aa10.12□□□□□ -0.79
USHBP1-202ENST00000324554 PRLHP81277 87 aa10.11□□□□□ -0.79
USHBP1-202ENST00000324554 FP248Q71RG6 208 aaPredicted RBP10.11□□□□□ -0.79
USHBP1-202ENST00000324554 LINC00476Q8WZB0 136 aa10.11□□□□□ -0.79
USHBP1-202ENST00000324554 K7EQZ3 153 aa10.1□□□□□ -0.79
USHBP1-202ENST00000324554 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.09□□□□□ -0.79
USHBP1-202ENST00000324554 ATP5EP56381 51 aaPredicted RBP10.09□□□□□ -0.79
USHBP1-202ENST00000324554 SMIM26A0A096LP01 95 aa10.07□□□□□ -0.8
USHBP1-202ENST00000324554 LINC00474Q9P2X8 69 aa10.07□□□□□ -0.8
USHBP1-202ENST00000324554 IGFL1Q6UW32 110 aa10.06□□□□□ -0.8
USHBP1-202ENST00000324554 CHTF8P0CG12 524 aa10.05□□□□□ -0.8
USHBP1-202ENST00000324554 C14orf177Q52M58 125 aa10.05□□□□□ -0.8
USHBP1-202ENST00000324554 LCE6AA0A183 80 aa10.05□□□□□ -0.8
USHBP1-202ENST00000324554 KRTAP11-1Q8IUC1 163 aa10.04□□□□□ -0.8
USHBP1-202ENST00000324554 PHF5AQ7RTV0 110 aaKnown RBP10.03□□□□□ -0.8
USHBP1-202ENST00000324554 DEFB116Q30KQ4 102 aa10.03□□□□□ -0.8
USHBP1-202ENST00000324554 FAM229BQ4G0N7 80 aa10.03□□□□□ -0.8
USHBP1-202ENST00000324554 NBDYA0A0U1RRE5 68 aa10.02□□□□□ -0.81
USHBP1-202ENST00000324554 SRRM2Q9UQ35 2752 aaKnown RBP10.02□□□□□ -0.81
USHBP1-202ENST00000324554 IGLV8-61A0A075B6I0 122 aa10.01□□□□□ -0.81
USHBP1-202ENST00000324554 KRTAP21-3Q3LHN1 58 aa10.01□□□□□ -0.81
USHBP1-202ENST00000324554 LRCOL1A6NCL2 159 aa10□□□□□ -0.81
USHBP1-202ENST00000324554 C9orf163Q8N9P6 203 aa9.99□□□□□ -0.81
USHBP1-202ENST00000324554 KMT2AQ03164 3969 aa9.99□□□□□ -0.81
USHBP1-202ENST00000324554 A0A087WSZ3 146 aa9.98□□□□□ -0.81
USHBP1-202ENST00000324554 HCG22E2RYF7 251 aa9.98□□□□□ -0.81
USHBP1-202ENST00000324554 UBE2AP49459 152 aa9.97□□□□□ -0.81
USHBP1-202ENST00000324554 ZCCHC13Q8WW36 166 aaKnown RBP9.97□□□□□ -0.81
USHBP1-202ENST00000324554 H0Y9J4 135 aa9.97□□□□□ -0.81
USHBP1-202ENST00000324554 LINC00336Q6ZUF6 198 aa9.97□□□□□ -0.81
USHBP1-202ENST00000324554 Q6ZRN7 208 aaPredicted RBP9.94□□□□□ -0.82
USHBP1-202ENST00000324554 SPRR1BP22528 89 aa9.94□□□□□ -0.82
USHBP1-202ENST00000324554 RPL37AP61513 92 aaKnown RBP9.94□□□□□ -0.82
USHBP1-202ENST00000324554 PANO1I0J062 215 aa9.93□□□□□ -0.82
USHBP1-202ENST00000324554 WFDC13Q8IUB5 93 aa9.93□□□□□ -0.82
USHBP1-202ENST00000324554 LY6G6CO95867 125 aa9.92□□□□□ -0.82
USHBP1-202ENST00000324554 MPLKIPQ8TAP9 179 aa9.92□□□□□ -0.82
USHBP1-202ENST00000324554 PKIGQ9Y2B9 76 aa9.92□□□□□ -0.82
USHBP1-202ENST00000324554 VPS13DQ5THJ4 4388 aa9.91□□□□□ -0.82
USHBP1-202ENST00000324554 hDV103S1A0JD37 113 aa9.87□□□□□ -0.83
USHBP1-202ENST00000324554 KRTAP13-1Q8IUC0 172 aa9.87□□□□□ -0.83
USHBP1-202ENST00000324554 KRTAP29-1A8MX34 341 aaPredicted RBP9.86□□□□□ -0.83
USHBP1-202ENST00000324554 C1orf64Q8NEQ6 169 aa9.86□□□□□ -0.83
USHBP1-202ENST00000324554 PRO0628Q9UI54 55 aa9.84□□□□□ -0.83
USHBP1-202ENST00000324554 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.84□□□□□ -0.83
USHBP1-202ENST00000324554 PRR4Q16378 134 aa9.84□□□□□ -0.83
USHBP1-202ENST00000324554 Q6ZR54 194 aa9.84□□□□□ -0.83
USHBP1-202ENST00000324554 SPACA4Q8TDM5 124 aa9.84□□□□□ -0.83
USHBP1-202ENST00000324554 WWC2-AS2Q96NR7 200 aa9.84□□□□□ -0.83
USHBP1-202ENST00000324554 LINC00472Q9H8W2 130 aa9.83□□□□□ -0.84
USHBP1-202ENST00000324554 PRR15Q8IV56 129 aa9.82□□□□□ -0.84
USHBP1-202ENST00000324554 DNAH2Q9P225 4427 aa9.82□□□□□ -0.84
USHBP1-202ENST00000324554 A0A087WTM6 91 aa9.81□□□□□ -0.84
USHBP1-202ENST00000324554 CASC2Q6XLA1 102 aa9.81□□□□□ -0.84
USHBP1-202ENST00000324554 HECTD4Q9Y4D8 3996 aa9.8□□□□□ -0.84
USHBP1-202ENST00000324554 A8MWP4 228 aa9.8□□□□□ -0.84
USHBP1-202ENST00000324554 MP68P56378 58 aa9.79□□□□□ -0.84
USHBP1-202ENST00000324554 LINC00208Q96KT6 92 aa9.79□□□□□ -0.84
USHBP1-202ENST00000324554 TRAV22A0A0B4J277 110 aa9.78□□□□□ -0.84
USHBP1-202ENST00000324554 CYP4F30PQ9H0H9 118 aa9.78□□□□□ -0.84
USHBP1-202ENST00000324554 C1orf134Q5TEV5 83 aa9.77□□□□□ -0.84
USHBP1-202ENST00000324554 BRK1Q8WUW1 75 aa9.77□□□□□ -0.85
USHBP1-202ENST00000324554 NDUFB1O75438 58 aa9.76□□□□□ -0.85
USHBP1-202ENST00000324554 H0Y9P7 68 aa9.75□□□□□ -0.85
USHBP1-202ENST00000324554 HYDINQ4G0P3 5121 aa9.74□□□□□ -0.85
USHBP1-202ENST00000324554 DNAH17Q9UFH2 4485 aa9.73□□□□□ -0.85
USHBP1-202ENST00000324554 IGLV9-49A0A0B4J1Y8 123 aa9.73□□□□□ -0.85
USHBP1-202ENST00000324554 RTL8CO15255 209 aa9.72□□□□□ -0.85
USHBP1-202ENST00000324554 LINC00483Q53H64 154 aa9.72□□□□□ -0.85
USHBP1-202ENST00000324554 FRAS1Q86XX4 4008 aa9.71□□□□□ -0.85
USHBP1-202ENST00000324554 MMP24-AS1A0A0U1RRL7 71 aa9.71□□□□□ -0.85
USHBP1-202ENST00000324554 Q1T7F1 81 aa9.71□□□□□ -0.85
USHBP1-202ENST00000324554 DNAH8Q96JB1 4490 aa9.7□□□□□ -0.86
USHBP1-202ENST00000324554 Q96NJ1 140 aa9.69□□□□□ -0.86
USHBP1-202ENST00000324554 PSORS1C2Q9UIG4 136 aa9.69□□□□□ -0.86
USHBP1-202ENST00000324554 IGLV5-52A0A0A0MRZ9 124 aa9.68□□□□□ -0.86
USHBP1-202ENST00000324554 H3BPC8 53 aa9.67□□□□□ -0.86
USHBP1-202ENST00000324554 PLAC8Q9NZF1 115 aa9.66□□□□□ -0.86
USHBP1-202ENST00000324554 ZNF706Q9Y5V0 76 aaPredicted RBP9.66□□□□□ -0.86
USHBP1-202ENST00000324554 SPANXA2-OT1Q8N9U9 137 aa9.65□□□□□ -0.86
USHBP1-202ENST00000324554 PSPHP1O15172 72 aa9.64□□□□□ -0.87
USHBP1-202ENST00000324554 KRTAP10-2P60368 255 aa9.64□□□□□ -0.87
USHBP1-202ENST00000324554 MOBPQ13875 183 aa9.63□□□□□ -0.87
USHBP1-202ENST00000324554 DNAH6Q9C0G6 4158 aa9.62□□□□□ -0.87
USHBP1-202ENST00000324554 ZNF861PO60384 105 aa9.62□□□□□ -0.87
USHBP1-202ENST00000324554 ANAPC11Q9NYG5 84 aa9.62□□□□□ -0.87
USHBP1-202ENST00000324554 ASB16-AS1Q495Z4 193 aa9.61□□□□□ -0.87
USHBP1-202ENST00000324554 C8orf17Q9NRJ1 99 aa9.57□□□□□ -0.88
USHBP1-202ENST00000324554 ALMS1Q8TCU4 4167 aa9.56□□□□□ -0.88
USHBP1-202ENST00000324554 A8MUN3 132 aa9.55□□□□□ -0.88
USHBP1-202ENST00000324554 IGHV6-1A0A0B4J1U7 121 aa9.55□□□□□ -0.88
USHBP1-202ENST00000324554 A0A1B0GVX0 72 aa9.53□□□□□ -0.88
USHBP1-202ENST00000324554 PCOTHQ58A44 107 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms