RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 PLA2G2DQ9UNK4 145 aa12.57□□□□□ -0.4
CRLF3-201ENST00000324238 PSCAO43653 123 aa12.56□□□□□ -0.4
CRLF3-201ENST00000324238 CHTF8P0CG12 524 aa12.56□□□□□ -0.4
CRLF3-201ENST00000324238 WFDC13Q8IUB5 93 aa12.56□□□□□ -0.4
CRLF3-201ENST00000324238 IGFL1Q6UW32 110 aa12.54□□□□□ -0.4
CRLF3-201ENST00000324238 DNAH9Q9NYC9 4486 aa12.54□□□□□ -0.4
CRLF3-201ENST00000324238 IGLV5-37A0A075B6J1 123 aa12.53□□□□□ -0.4
CRLF3-201ENST00000324238 A0A087WSZ3 146 aa12.53□□□□□ -0.4
CRLF3-201ENST00000324238 DNAH7Q8WXX0 4024 aa12.52□□□□□ -0.4
CRLF3-201ENST00000324238 KRTAP11-1Q8IUC1 163 aa12.52□□□□□ -0.4
CRLF3-201ENST00000324238 SPRR4Q96PI1 79 aa12.52□□□□□ -0.41
CRLF3-201ENST00000324238 UBE2DNLQ8IWF7 75 aa12.51□□□□□ -0.41
CRLF3-201ENST00000324238 PHF5AQ7RTV0 110 aaKnown RBP12.48□□□□□ -0.41
CRLF3-201ENST00000324238 BRK1Q8WUW1 75 aa12.46□□□□□ -0.41
CRLF3-201ENST00000324238 HCG22E2RYF7 251 aa12.45□□□□□ -0.42
CRLF3-201ENST00000324238 ATP5EP56381 51 aaPredicted RBP12.44□□□□□ -0.42
CRLF3-201ENST00000324238 UBE2AP49459 152 aa12.42□□□□□ -0.42
CRLF3-201ENST00000324238 PKIGQ9Y2B9 76 aa12.42□□□□□ -0.42
CRLF3-201ENST00000324238 C1orf64Q8NEQ6 169 aa12.39□□□□□ -0.43
CRLF3-201ENST00000324238 C16orf90A8MZG2 172 aa12.38□□□□□ -0.43
CRLF3-201ENST00000324238 PRO0628Q9UI54 55 aa12.37□□□□□ -0.43
CRLF3-201ENST00000324238 A0A1B0GW54 56 aa12.36□□□□□ -0.43
CRLF3-201ENST00000324238 PLECQ15149 4684 aaKnown RBP12.34□□□□□ -0.43
CRLF3-201ENST00000324238 ZCCHC13Q8WW36 166 aaKnown RBP12.34□□□□□ -0.43
CRLF3-201ENST00000324238 LCE6AA0A183 80 aa12.34□□□□□ -0.43
CRLF3-201ENST00000324238 LINC00208Q96KT6 92 aa12.34□□□□□ -0.43
CRLF3-201ENST00000324238 hDV103S1A0JD37 113 aa12.33□□□□□ -0.43
CRLF3-201ENST00000324238 PANO1I0J062 215 aa12.33□□□□□ -0.44
CRLF3-201ENST00000324238 MDFIQ99750 246 aa12.32□□□□□ -0.44
CRLF3-201ENST00000324238 TGP01266 2768 aa12.32□□□□□ -0.44
CRLF3-201ENST00000324238 PSPHP1O15172 72 aa12.3□□□□□ -0.44
CRLF3-201ENST00000324238 APLNQ9ULZ1 77 aa12.27□□□□□ -0.44
CRLF3-201ENST00000324238 CNBPP62633 177 aaKnown RBP12.26□□□□□ -0.45
CRLF3-201ENST00000324238 CASC2Q6XLA1 102 aa12.25□□□□□ -0.45
CRLF3-201ENST00000324238 H0Y9J4 135 aa12.25□□□□□ -0.45
CRLF3-201ENST00000324238 IGLV9-49A0A0B4J1Y8 123 aa12.23□□□□□ -0.45
CRLF3-201ENST00000324238 MP68P56378 58 aa12.23□□□□□ -0.45
CRLF3-201ENST00000324238 IGLV8-61A0A075B6I0 122 aa12.21□□□□□ -0.45
CRLF3-201ENST00000324238 KRTAP29-1A8MX34 341 aaPredicted RBP12.21□□□□□ -0.46
CRLF3-201ENST00000324238 H0Y9P7 68 aa12.21□□□□□ -0.46
CRLF3-201ENST00000324238 PRR15Q8IV56 129 aa12.2□□□□□ -0.46
CRLF3-201ENST00000324238 TRAV22A0A0B4J277 110 aa12.18□□□□□ -0.46
CRLF3-201ENST00000324238 LINC00472Q9H8W2 130 aa12.17□□□□□ -0.46
CRLF3-201ENST00000324238 ANAPC11Q9NYG5 84 aa12.17□□□□□ -0.46
CRLF3-201ENST00000324238 STARD9Q9P2P6 4700 aa12.16□□□□□ -0.46
CRLF3-201ENST00000324238 C9orf163Q8N9P6 203 aa12.15□□□□□ -0.47
CRLF3-201ENST00000324238 NBDYA0A0U1RRE5 68 aa12.14□□□□□ -0.47
CRLF3-201ENST00000324238 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.14□□□□□ -0.47
CRLF3-201ENST00000324238 A8MWP4 228 aa12.14□□□□□ -0.47
CRLF3-201ENST00000324238 B9D2Q9BPU9 175 aa12.14□□□□□ -0.47
CRLF3-201ENST00000324238 A8MUN3 132 aa12.12□□□□□ -0.47
CRLF3-201ENST00000324238 PRKDCP78527 4128 aaKnown RBP12.12□□□□□ -0.47
CRLF3-201ENST00000324238 KMT2AQ03164 3969 aa12.11□□□□□ -0.47
CRLF3-201ENST00000324238 A8MU10 97 aa12.11□□□□□ -0.47
CRLF3-201ENST00000324238 FRAS1Q86XX4 4008 aa12.11□□□□□ -0.47
CRLF3-201ENST00000324238 MEGF8Q7Z7M0 2845 aa12.11□□□□□ -0.47
CRLF3-201ENST00000324238 PCOTHQ58A44 107 aa12.1□□□□□ -0.47
CRLF3-201ENST00000324238 C14orf177Q52M58 125 aa12.09□□□□□ -0.47
CRLF3-201ENST00000324238 CYP4F30PQ9H0H9 118 aa12.08□□□□□ -0.48
CRLF3-201ENST00000324238 SPRR1BP22528 89 aa12.08□□□□□ -0.48
CRLF3-201ENST00000324238 NDUFB1O75438 58 aa12.07□□□□□ -0.48
CRLF3-201ENST00000324238 Q1T7F1 81 aa12.06□□□□□ -0.48
CRLF3-201ENST00000324238 MMP24-AS1A0A0U1RRL7 71 aa12.06□□□□□ -0.48
CRLF3-201ENST00000324238 NDUFS5O43920 106 aa12.02□□□□□ -0.49
CRLF3-201ENST00000324238 IGHV6-1A0A0B4J1U7 121 aa12.02□□□□□ -0.49
CRLF3-201ENST00000324238 MOBPQ13875 183 aa12.02□□□□□ -0.49
CRLF3-201ENST00000324238 Q6ZRN7 208 aaPredicted RBP12.02□□□□□ -0.49
CRLF3-201ENST00000324238 C1orf195Q5TG92 126 aa12.01□□□□□ -0.49
CRLF3-201ENST00000324238 KRTAP13-1Q8IUC0 172 aa12.01□□□□□ -0.49
CRLF3-201ENST00000324238 Q96NJ1 140 aa11.99□□□□□ -0.49
CRLF3-201ENST00000324238 A0A087X002 238 aa11.98□□□□□ -0.49
CRLF3-201ENST00000324238 NOTCH2NLQ7Z3S9 236 aa11.98□□□□□ -0.49
CRLF3-201ENST00000324238 FBN3Q75N90 2809 aa11.97□□□□□ -0.49
CRLF3-201ENST00000324238 DNHD1Q96M86 4753 aa11.97□□□□□ -0.49
CRLF3-201ENST00000324238 NUPR2A6NF83 97 aa11.96□□□□□ -0.5
CRLF3-201ENST00000324238 A0A087WTM6 91 aa11.94□□□□□ -0.5
CRLF3-201ENST00000324238 SPINK6Q6UWN8 80 aa11.94□□□□□ -0.5
CRLF3-201ENST00000324238 SPACA4Q8TDM5 124 aa11.94□□□□□ -0.5
CRLF3-201ENST00000324238 DNAH8Q96JB1 4490 aa11.93□□□□□ -0.5
CRLF3-201ENST00000324238 DNAH2Q9P225 4427 aa11.93□□□□□ -0.5
CRLF3-201ENST00000324238 PSORS1C2Q9UIG4 136 aa11.93□□□□□ -0.5
CRLF3-201ENST00000324238 HECTD4Q9Y4D8 3996 aa11.93□□□□□ -0.5
CRLF3-201ENST00000324238 DYNC2H1Q8NCM8 4307 aaKnown RBP11.92□□□□□ -0.5
CRLF3-201ENST00000324238 Q5VV11 94 aa11.92□□□□□ -0.5
CRLF3-201ENST00000324238 PRR15LQ9BU68 103 aa11.92□□□□□ -0.5
CRLF3-201ENST00000324238 CD164Q04900 197 aa11.91□□□□□ -0.5
CRLF3-201ENST00000324238 Q8N9P0 234 aaPredicted RBP11.91□□□□□ -0.5
CRLF3-201ENST00000324238 RTL8CO15255 209 aa11.91□□□□□ -0.5
CRLF3-201ENST00000324238 CHKB-CPT1BH3BT56 60 aa11.9□□□□□ -0.5
CRLF3-201ENST00000324238 C8orf17Q9NRJ1 99 aa11.9□□□□□ -0.5
CRLF3-201ENST00000324238 COA5Q86WW8 74 aa11.9□□□□□ -0.5
CRLF3-201ENST00000324238 VPS13DQ5THJ4 4388 aa11.89□□□□□ -0.51
CRLF3-201ENST00000324238 SPANXA2-OT1Q8N9U9 137 aa11.88□□□□□ -0.51
CRLF3-201ENST00000324238 WWC2-AS2Q96NR7 200 aa11.86□□□□□ -0.51
CRLF3-201ENST00000324238 H3BPC8 53 aa11.85□□□□□ -0.51
CRLF3-201ENST00000324238 CDK2AP2O75956 126 aa11.83□□□□□ -0.52
CRLF3-201ENST00000324238 LY6G6CO95867 125 aa11.83□□□□□ -0.52
CRLF3-201ENST00000324238 DNAH17Q9UFH2 4485 aa11.83□□□□□ -0.52
CRLF3-201ENST00000324238 SPAG11AQ6PDA7 123 aa11.82□□□□□ -0.52
CRLF3-201ENST00000324238 A0A1B0GVX0 72 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms