RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 ZNF561-AS1K7EIQ3 104 aa4.07□□□□□ -1.76
CSTF3-201ENST00000323959 IGLV6-57P01721 117 aa4.07□□□□□ -1.76
CSTF3-201ENST00000323959 CHTF8P0CG12 524 aa4.07□□□□□ -1.76
CSTF3-201ENST00000323959 LINC00158P58513 81 aa4.07□□□□□ -1.76
CSTF3-201ENST00000323959 RPL18AQ02543 176 aaKnown RBP4.07□□□□□ -1.76
CSTF3-201ENST00000323959 KRTAP19-1Q8IUB9 90 aa4.07□□□□□ -1.76
CSTF3-201ENST00000323959 SMCR5Q8TEV8 140 aa4.07□□□□□ -1.76
CSTF3-201ENST00000323959 TOMM7Q9P0U1 55 aa4.07□□□□□ -1.76
CSTF3-201ENST00000323959 IGLV10-54A0A075B6I4 117 aa4.06□□□□□ -1.76
CSTF3-201ENST00000323959 LINC00337Q8N6G1 96 aa4.06□□□□□ -1.76
CSTF3-201ENST00000323959 MT1HP80294 61 aa4.06□□□□□ -1.76
CSTF3-201ENST00000323959 C10orf25Q5T742 122 aa4.06□□□□□ -1.76
CSTF3-201ENST00000323959 UNQ6190/PRO20217Q6UXQ8 127 aa4.06□□□□□ -1.76
CSTF3-201ENST00000323959 CLEC2BQ92478 149 aa4.06□□□□□ -1.76
CSTF3-201ENST00000323959 SYCNQ0VAF6 134 aa4.05□□□□□ -1.76
CSTF3-201ENST00000323959 LCE2CQ5TA81 110 aa4.05□□□□□ -1.76
CSTF3-201ENST00000323959 CAMK2N2Q96S95 79 aa4.05□□□□□ -1.76
CSTF3-201ENST00000323959 Q9HAA7 133 aa4.05□□□□□ -1.76
CSTF3-201ENST00000323959 IGKV2D-24A0A075B6R9 120 aa4.04□□□□□ -1.76
CSTF3-201ENST00000323959 VPREB1P12018 145 aa4.04□□□□□ -1.76
CSTF3-201ENST00000323959 DSCR8Q96T75 97 aa4.04□□□□□ -1.76
CSTF3-201ENST00000323959 USP17L23D6RBM5 183 aa4.04□□□□□ -1.76
CSTF3-201ENST00000323959 M0R378 163 aa4.03□□□□□ -1.76
CSTF3-201ENST00000323959 PFN2P35080 140 aa4.03□□□□□ -1.76
CSTF3-201ENST00000323959 Q6JHZ5 121 aa4.03□□□□□ -1.76
CSTF3-201ENST00000323959 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.03□□□□□ -1.76
CSTF3-201ENST00000323959 BAALC-AS2P0C853 105 aa4.02□□□□□ -1.77
CSTF3-201ENST00000323959 NPC2P61916 151 aa4.02□□□□□ -1.77
CSTF3-201ENST00000323959 SMIM11BQ8TCY0 68 aa4.02□□□□□ -1.77
CSTF3-201ENST00000323959 SLPIP03973 132 aa4.02□□□□□ -1.77
CSTF3-201ENST00000323959 TPRXLQ17RH7 258 aa4.02□□□□□ -1.77
CSTF3-201ENST00000323959 CYSTM1Q9H1C7 97 aa4.02□□□□□ -1.77
CSTF3-201ENST00000323959 LECT2O14960 151 aa4.02□□□□□ -1.77
CSTF3-201ENST00000323959 OBSCN-AS1Q96MR7 158 aa4.02□□□□□ -1.77
CSTF3-201ENST00000323959 KCNQ1DNQ9H478 68 aa4.02□□□□□ -1.77
CSTF3-201ENST00000323959 SERP1Q9Y6X1 66 aa4.02□□□□□ -1.77
CSTF3-201ENST00000323959 SPRR1AP35321 89 aa4.01□□□□□ -1.77
CSTF3-201ENST00000323959 Q6ZRP5 223 aa4.01□□□□□ -1.77
CSTF3-201ENST00000323959 Q8NDZ9 215 aa4.01□□□□□ -1.77
CSTF3-201ENST00000323959 PLAC8Q9NZF1 115 aa4.01□□□□□ -1.77
CSTF3-201ENST00000323959 C9orf129Q5T035 196 aaKnown RBP4.01□□□□□ -1.77
CSTF3-201ENST00000323959 IGLV1-50A0A075B6I6 118 aa4□□□□□ -1.77
CSTF3-201ENST00000323959 PRYO14603 147 aa4□□□□□ -1.77
CSTF3-201ENST00000323959 C9orf116Q5BN46 136 aaPredicted RBP4□□□□□ -1.77
CSTF3-201ENST00000323959 DNAL4O96015 105 aa4□□□□□ -1.77
CSTF3-201ENST00000323959 GHRHP01286 108 aa4□□□□□ -1.77
CSTF3-201ENST00000323959 SEC61GP60059 68 aa4□□□□□ -1.77
CSTF3-201ENST00000323959 HIGD2BQ4VC39 106 aa4□□□□□ -1.77
CSTF3-201ENST00000323959 C9orf163Q8N9P6 203 aa4□□□□□ -1.77
CSTF3-201ENST00000323959 LINC00474Q9P2X8 69 aa4□□□□□ -1.77
CSTF3-201ENST00000323959 V9GYY9 64 aa4□□□□□ -1.77
CSTF3-201ENST00000323959 FAM236DA0A1B0GTK5 79 aa3.99□□□□□ -1.77
CSTF3-201ENST00000323959 KRTAP2-3P0C7H8 128 aa3.99□□□□□ -1.77
CSTF3-201ENST00000323959 FAM236CP0DP71 79 aa3.99□□□□□ -1.77
CSTF3-201ENST00000323959 ELOF1P60002 83 aaKnown RBP3.99□□□□□ -1.77
CSTF3-201ENST00000323959 ASB16-AS1Q495Z4 193 aa3.99□□□□□ -1.77
CSTF3-201ENST00000323959 KRTAP2-4Q9BYR9 128 aa3.99□□□□□ -1.77
CSTF3-201ENST00000323959 SMIM26A0A096LP01 95 aa3.99□□□□□ -1.77
CSTF3-201ENST00000323959 KRTAP4-16G5E9R7 235 aaPredicted RBP3.99□□□□□ -1.77
CSTF3-201ENST00000323959 S100A7L2Q5SY68 101 aa3.99□□□□□ -1.77
CSTF3-201ENST00000323959 LINC00575Q6W349 94 aa3.99□□□□□ -1.77
CSTF3-201ENST00000323959 TRAV23DV6A0A075B6W5 121 aa3.98□□□□□ -1.77
CSTF3-201ENST00000323959 A0A0U1RRA0 63 aa3.98□□□□□ -1.77
CSTF3-201ENST00000323959 BCE1O60756 84 aa3.98□□□□□ -1.77
CSTF3-201ENST00000323959 ATP5EP2Q5VTU8 51 aa3.98□□□□□ -1.77
CSTF3-201ENST00000323959 C22orf24Q9Y442 160 aa3.98□□□□□ -1.77
CSTF3-201ENST00000323959 IGKV3D-7A0A0C4DH55 119 aa3.97□□□□□ -1.77
CSTF3-201ENST00000323959 H0Y9J4 135 aa3.97□□□□□ -1.77
CSTF3-201ENST00000323959 FAM218AQ96MZ4 157 aa3.97□□□□□ -1.77
CSTF3-201ENST00000323959 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.97□□□□□ -1.77
CSTF3-201ENST00000323959 DIRC1Q969H9 104 aa3.97□□□□□ -1.77
CSTF3-201ENST00000323959 ZNF73O43830 326 aaPredicted RBP3.97□□□□□ -1.77
CSTF3-201ENST00000323959 C1orf195Q5TG92 126 aa3.97□□□□□ -1.77
CSTF3-201ENST00000323959 KRTAP7-1Q8IUC3 87 aa3.97□□□□□ -1.77
CSTF3-201ENST00000323959 TRBV10-3A0A0K0K1G6 114 aa3.96□□□□□ -1.78
CSTF3-201ENST00000323959 A0A087WYN8 130 aa3.96□□□□□ -1.78
CSTF3-201ENST00000323959 TMEM256-PLSCR3K7ERE1 68 aa3.96□□□□□ -1.78
CSTF3-201ENST00000323959 A0A087WVE0 104 aa3.95□□□□□ -1.78
CSTF3-201ENST00000323959 NCR3O14931 201 aa3.95□□□□□ -1.78
CSTF3-201ENST00000323959 KRTAP1-4P0C5Y4 121 aa3.95□□□□□ -1.78
CSTF3-201ENST00000323959 SPACA4Q8TDM5 124 aa3.95□□□□□ -1.78
CSTF3-201ENST00000323959 C6orf99Q4VX62 202 aa3.95□□□□□ -1.78
CSTF3-201ENST00000323959 ORMDL1Q9P0S3 153 aa3.95□□□□□ -1.78
CSTF3-201ENST00000323959 DHRS4-AS1Q9P1J3 65 aa3.95□□□□□ -1.78
CSTF3-201ENST00000323959 JMJD7-PLA2G4BH0Y9G9 81 aa3.94□□□□□ -1.78
CSTF3-201ENST00000323959 COX7BP24311 80 aa3.94□□□□□ -1.78
CSTF3-201ENST00000323959 ATP5EP56381 51 aaPredicted RBP3.94□□□□□ -1.78
CSTF3-201ENST00000323959 MRPL55Q7Z7F7 128 aaKnown RBP3.94□□□□□ -1.78
CSTF3-201ENST00000323959 C20orf197Q8N268 126 aa3.94□□□□□ -1.78
CSTF3-201ENST00000323959 PRR26Q8N8Z3 221 aa3.94□□□□□ -1.78
CSTF3-201ENST00000323959 NKAPP1Q8N9T2 125 aa3.94□□□□□ -1.78
CSTF3-201ENST00000323959 A0A1B0GW54 56 aa3.94□□□□□ -1.78
CSTF3-201ENST00000323959 XAGE1AQ9HD64 81 aa3.94□□□□□ -1.78
CSTF3-201ENST00000323959 TRAV7A0A075B6U4 112 aa3.93□□□□□ -1.78
CSTF3-201ENST00000323959 H7BZZ5 65 aa3.93□□□□□ -1.78
CSTF3-201ENST00000323959 KRTAP19-2Q3LHN2 52 aa3.93□□□□□ -1.78
CSTF3-201ENST00000323959 C14orf132Q9NPU4 83 aa3.93□□□□□ -1.78
CSTF3-201ENST00000323959 IGLV5-48A0A075B6I7 105 aa3.93□□□□□ -1.78
CSTF3-201ENST00000323959 LOC110117498A0A087WWA1 95 aa3.93□□□□□ -1.78
CSTF3-201ENST00000323959 NDUFC1O43677 76 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms