RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 K7EIL1 84 aa5.47□□□□□ -1.53
CLK1-201ENST00000321356 PRB2P02812 416 aaPredicted RBP5.47□□□□□ -1.53
CLK1-201ENST00000321356 KRTAP1-5Q9BYS1 174 aa5.47□□□□□ -1.53
CLK1-201ENST00000321356 LINC00474Q9P2X8 69 aa5.47□□□□□ -1.53
CLK1-201ENST00000321356 PSCAO43653 123 aa5.46□□□□□ -1.54
CLK1-201ENST00000321356 PRLHP81277 87 aa5.46□□□□□ -1.54
CLK1-201ENST00000321356 COL7A1Q02388 2944 aa5.46□□□□□ -1.54
CLK1-201ENST00000321356 DYNC2H1Q8NCM8 4307 aaKnown RBP5.46□□□□□ -1.54
CLK1-201ENST00000321356 A0A0G2JQZ4 141 aa5.45□□□□□ -1.54
CLK1-201ENST00000321356 HCG22E2RYF7 251 aa5.45□□□□□ -1.54
CLK1-201ENST00000321356 FAM229BQ4G0N7 80 aa5.45□□□□□ -1.54
CLK1-201ENST00000321356 IGKV2-24A0A0C4DH68 120 aa5.45□□□□□ -1.54
CLK1-201ENST00000321356 SRRM2Q9UQ35 2752 aaKnown RBP5.45□□□□□ -1.54
CLK1-201ENST00000321356 LINC00336Q6ZUF6 198 aa5.44□□□□□ -1.54
CLK1-201ENST00000321356 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.43□□□□□ -1.54
CLK1-201ENST00000321356 H0Y9J4 135 aa5.43□□□□□ -1.54
CLK1-201ENST00000321356 SPRR1BP22528 89 aa5.43□□□□□ -1.54
CLK1-201ENST00000321356 LYSTQ99698 3801 aa5.43□□□□□ -1.54
CLK1-201ENST00000321356 A0A087WSZ3 146 aa5.43□□□□□ -1.54
CLK1-201ENST00000321356 MGAM2Q2M2H8 2515 aa5.42□□□□□ -1.54
CLK1-201ENST00000321356 KRTAP11-1Q8IUC1 163 aa5.42□□□□□ -1.54
CLK1-201ENST00000321356 hDV103S1A0JD37 113 aa5.41□□□□□ -1.54
CLK1-201ENST00000321356 C14orf177Q52M58 125 aa5.41□□□□□ -1.54
CLK1-201ENST00000321356 PRO0628Q9UI54 55 aa5.41□□□□□ -1.54
CLK1-201ENST00000321356 KRTAP29-1A8MX34 341 aaPredicted RBP5.41□□□□□ -1.54
CLK1-201ENST00000321356 UBE2AP49459 152 aa5.41□□□□□ -1.54
CLK1-201ENST00000321356 DEFB116Q30KQ4 102 aa5.41□□□□□ -1.54
CLK1-201ENST00000321356 TENM2Q9NT68 2774 aa5.41□□□□□ -1.54
CLK1-201ENST00000321356 PHF5AQ7RTV0 110 aaKnown RBP5.4□□□□□ -1.55
CLK1-201ENST00000321356 APLNQ9ULZ1 77 aa5.4□□□□□ -1.55
CLK1-201ENST00000321356 CHTF8P0CG12 524 aa5.39□□□□□ -1.55
CLK1-201ENST00000321356 CYP4F30PQ9H0H9 118 aa5.39□□□□□ -1.55
CLK1-201ENST00000321356 C9orf163Q8N9P6 203 aa5.39□□□□□ -1.55
CLK1-201ENST00000321356 WFDC13Q8IUB5 93 aa5.38□□□□□ -1.55
CLK1-201ENST00000321356 C1orf64Q8NEQ6 169 aa5.38□□□□□ -1.55
CLK1-201ENST00000321356 LINC00472Q9H8W2 130 aa5.38□□□□□ -1.55
CLK1-201ENST00000321356 RPL37AP61513 92 aaKnown RBP5.37□□□□□ -1.55
CLK1-201ENST00000321356 PRR15Q8IV56 129 aa5.37□□□□□ -1.55
CLK1-201ENST00000321356 UBE2DNLQ8IWF7 75 aa5.37□□□□□ -1.55
CLK1-201ENST00000321356 MPLKIPQ8TAP9 179 aa5.37□□□□□ -1.55
CLK1-201ENST00000321356 LRCOL1A6NCL2 159 aa5.37□□□□□ -1.55
CLK1-201ENST00000321356 NDUFB1O75438 58 aa5.37□□□□□ -1.55
CLK1-201ENST00000321356 KRTAP13-1Q8IUC0 172 aa5.37□□□□□ -1.55
CLK1-201ENST00000321356 A8MWP4 228 aa5.36□□□□□ -1.55
CLK1-201ENST00000321356 MP68P56378 58 aa5.36□□□□□ -1.55
CLK1-201ENST00000321356 PKIGQ9Y2B9 76 aa5.36□□□□□ -1.55
CLK1-201ENST00000321356 CSMD3Q7Z407 3707 aa5.36□□□□□ -1.55
CLK1-201ENST00000321356 DNAH7Q8WXX0 4024 aa5.35□□□□□ -1.55
CLK1-201ENST00000321356 PLECQ15149 4684 aaKnown RBP5.35□□□□□ -1.55
CLK1-201ENST00000321356 TRAV22A0A0B4J277 110 aa5.35□□□□□ -1.55
CLK1-201ENST00000321356 Q1T7F1 81 aa5.34□□□□□ -1.55
CLK1-201ENST00000321356 CASC2Q6XLA1 102 aa5.34□□□□□ -1.55
CLK1-201ENST00000321356 B9D2Q9BPU9 175 aa5.34□□□□□ -1.55
CLK1-201ENST00000321356 H3BPC8 53 aa5.34□□□□□ -1.55
CLK1-201ENST00000321356 PANO1I0J062 215 aa5.33□□□□□ -1.56
CLK1-201ENST00000321356 Q6ZRN7 208 aaPredicted RBP5.33□□□□□ -1.56
CLK1-201ENST00000321356 LINC00208Q96KT6 92 aa5.33□□□□□ -1.56
CLK1-201ENST00000321356 VPS13DQ5THJ4 4388 aa5.33□□□□□ -1.56
CLK1-201ENST00000321356 NBDYA0A0U1RRE5 68 aa5.32□□□□□ -1.56
CLK1-201ENST00000321356 H0Y9P7 68 aa5.32□□□□□ -1.56
CLK1-201ENST00000321356 SPANXA2-OT1Q8N9U9 137 aa5.32□□□□□ -1.56
CLK1-201ENST00000321356 BRK1Q8WUW1 75 aa5.32□□□□□ -1.56
CLK1-201ENST00000321356 MMP24-AS1A0A0U1RRL7 71 aa5.31□□□□□ -1.56
CLK1-201ENST00000321356 PRR4Q16378 134 aa5.3□□□□□ -1.56
CLK1-201ENST00000321356 SPACA4Q8TDM5 124 aa5.3□□□□□ -1.56
CLK1-201ENST00000321356 ASB16-AS1Q495Z4 193 aa5.29□□□□□ -1.56
CLK1-201ENST00000321356 LINC00483Q53H64 154 aa5.29□□□□□ -1.56
CLK1-201ENST00000321356 Q96NJ1 140 aa5.29□□□□□ -1.56
CLK1-201ENST00000321356 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.28□□□□□ -1.56
CLK1-201ENST00000321356 DNAH8Q96JB1 4490 aa5.27□□□□□ -1.57
CLK1-201ENST00000321356 MDFIQ99750 246 aa5.27□□□□□ -1.57
CLK1-201ENST00000321356 DNAH17Q9UFH2 4485 aa5.27□□□□□ -1.57
CLK1-201ENST00000321356 NUPR2A6NF83 97 aa5.26□□□□□ -1.57
CLK1-201ENST00000321356 HECTD4Q9Y4D8 3996 aa5.26□□□□□ -1.57
CLK1-201ENST00000321356 LOC100996750A0A140TA64 210 aa5.26□□□□□ -1.57
CLK1-201ENST00000321356 KRTAP4-6Q9BYQ5 205 aa5.26□□□□□ -1.57
CLK1-201ENST00000321356 MOBPQ13875 183 aa5.25□□□□□ -1.57
CLK1-201ENST00000321356 IGLV9-49A0A0B4J1Y8 123 aa5.24□□□□□ -1.57
CLK1-201ENST00000321356 V9GYY9 64 aa5.24□□□□□ -1.57
CLK1-201ENST00000321356 DNAH2Q9P225 4427 aa5.24□□□□□ -1.57
CLK1-201ENST00000321356 WWC2-AS2Q96NR7 200 aa5.24□□□□□ -1.57
CLK1-201ENST00000321356 TP53AIP1Q9HCN2 124 aa5.24□□□□□ -1.57
CLK1-201ENST00000321356 PRKDCP78527 4128 aaKnown RBP5.24□□□□□ -1.57
CLK1-201ENST00000321356 A0A087WTM6 91 aa5.23□□□□□ -1.57
CLK1-201ENST00000321356 PSPHP1O15172 72 aa5.23□□□□□ -1.57
CLK1-201ENST00000321356 C8orf17Q9NRJ1 99 aa5.23□□□□□ -1.57
CLK1-201ENST00000321356 ZNF706Q9Y5V0 76 aaPredicted RBP5.23□□□□□ -1.57
CLK1-201ENST00000321356 STARD9Q9P2P6 4700 aa5.23□□□□□ -1.57
CLK1-201ENST00000321356 IGLV7-46A0A075B6I9 117 aa5.22□□□□□ -1.57
CLK1-201ENST00000321356 Q6ZR54 194 aa5.22□□□□□ -1.57
CLK1-201ENST00000321356 IGLV5-52A0A0A0MRZ9 124 aa5.22□□□□□ -1.57
CLK1-201ENST00000321356 PSORS1C2Q9UIG4 136 aa5.22□□□□□ -1.57
CLK1-201ENST00000321356 FBN3Q75N90 2809 aa5.21□□□□□ -1.57
CLK1-201ENST00000321356 A0A1B0GVX0 72 aa5.21□□□□□ -1.58
CLK1-201ENST00000321356 A8MUN3 132 aa5.21□□□□□ -1.58
CLK1-201ENST00000321356 PLAC8Q9NZF1 115 aa5.21□□□□□ -1.58
CLK1-201ENST00000321356 C1orf195Q5TG92 126 aa5.2□□□□□ -1.58
CLK1-201ENST00000321356 Q8N9P0 234 aaPredicted RBP5.2□□□□□ -1.58
CLK1-201ENST00000321356 RTL8CO15255 209 aa5.2□□□□□ -1.58
CLK1-201ENST00000321356 Q5VV11 94 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms