RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 CYP4F30PQ9H0H9 118 aa6.13□□□□□ -1.43
CAPN3-201ENST00000318023 Q8N9P0 234 aaPredicted RBP6.12□□□□□ -1.43
CAPN3-201ENST00000318023 FRAS1Q86XX4 4008 aa6.12□□□□□ -1.43
CAPN3-201ENST00000318023 ATP11AUNQ6ZP68 121 aa6.12□□□□□ -1.43
CAPN3-201ENST00000318023 EPPK1P58107 5090 aaKnown RBP6.12□□□□□ -1.43
CAPN3-201ENST00000318023 DEFB116Q30KQ4 102 aa6.12□□□□□ -1.43
CAPN3-201ENST00000318023 ETDCA0A1B0GVM5 59 aa6.11□□□□□ -1.43
CAPN3-201ENST00000318023 DEFB105AQ8NG35 78 aa6.11□□□□□ -1.43
CAPN3-201ENST00000318023 PHF5AQ7RTV0 110 aaKnown RBP6.1□□□□□ -1.43
CAPN3-201ENST00000318023 GYPEP15421 78 aa6.1□□□□□ -1.43
CAPN3-201ENST00000318023 C7orf65Q6ZTY9 151 aa6.1□□□□□ -1.43
CAPN3-201ENST00000318023 CHCHD10Q8WYQ3 142 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-201ENST00000318023 H3BQ85 93 aa6.09□□□□□ -1.43
CAPN3-201ENST00000318023 K7EQZ3 153 aa6.09□□□□□ -1.43
CAPN3-201ENST00000318023 ELOF1P60002 83 aaKnown RBP6.08□□□□□ -1.44
CAPN3-201ENST00000318023 LINC00208Q96KT6 92 aa6.08□□□□□ -1.44
CAPN3-201ENST00000318023 LIMD2Q9BT23 127 aa6.08□□□□□ -1.44
CAPN3-201ENST00000318023 VPS13DQ5THJ4 4388 aa6.07□□□□□ -1.44
CAPN3-201ENST00000318023 SPAG11BQ08648 103 aa6.07□□□□□ -1.44
CAPN3-201ENST00000318023 PRO0255Q9UI72 69 aa6.07□□□□□ -1.44
CAPN3-201ENST00000318023 ANGP03950 147 aaKnown RBP6.06□□□□□ -1.44
CAPN3-201ENST00000318023 PRAC1Q96KF2 57 aa6.06□□□□□ -1.44
CAPN3-201ENST00000318023 MOBPQ13875 183 aa6.05□□□□□ -1.44
CAPN3-201ENST00000318023 DYNC2H1Q8NCM8 4307 aaKnown RBP6.05□□□□□ -1.44
CAPN3-201ENST00000318023 DSCR10P59022 87 aa6.04□□□□□ -1.44
CAPN3-201ENST00000318023 Q75L30 129 aa6.04□□□□□ -1.44
CAPN3-201ENST00000318023 WFDC10BQ8IUB3 73 aa6.04□□□□□ -1.44
CAPN3-201ENST00000318023 WFDC13Q8IUB5 93 aa6.04□□□□□ -1.44
CAPN3-201ENST00000318023 NDUFB1O75438 58 aa6.04□□□□□ -1.44
CAPN3-201ENST00000318023 REG3AQ06141 175 aa6.03□□□□□ -1.44
CAPN3-201ENST00000318023 KRTAP1-5Q9BYS1 174 aa6.03□□□□□ -1.44
CAPN3-201ENST00000318023 A0A1W2PNM2 257 aa6.03□□□□□ -1.44
CAPN3-201ENST00000318023 CDC42SE1Q9NRR8 79 aa6.03□□□□□ -1.44
CAPN3-201ENST00000318023 LINC00528Q8N1L1 170 aa6.02□□□□□ -1.45
CAPN3-201ENST00000318023 A0A1B0GUV1 79 aa6.02□□□□□ -1.45
CAPN3-201ENST00000318023 DNAH1Q9P2D7 4330 aa6.02□□□□□ -1.45
CAPN3-201ENST00000318023 MP68P56378 58 aa6.01□□□□□ -1.45
CAPN3-201ENST00000318023 DNAH10Q8IVF4 4471 aa6.01□□□□□ -1.45
CAPN3-201ENST00000318023 NKAPP1Q8N9T2 125 aa6.01□□□□□ -1.45
CAPN3-201ENST00000318023 Q8N377 158 aa6□□□□□ -1.45
CAPN3-201ENST00000318023 C6orf48Q9UBA6 75 aa6□□□□□ -1.45
CAPN3-201ENST00000318023 DNAH2Q9P225 4427 aa6□□□□□ -1.45
CAPN3-201ENST00000318023 NBDYA0A0U1RRE5 68 aa6□□□□□ -1.45
CAPN3-201ENST00000318023 LINC00313P59037 77 aa6□□□□□ -1.45
CAPN3-201ENST00000318023 ADM2Q7Z4H4 148 aa6□□□□□ -1.45
CAPN3-201ENST00000318023 TNP2Q05952 138 aa5.99□□□□□ -1.45
CAPN3-201ENST00000318023 C1orf134Q5TEV5 83 aa5.99□□□□□ -1.45
CAPN3-201ENST00000318023 LOC101927531A0A1B0GV80 90 aa5.99□□□□□ -1.45
CAPN3-201ENST00000318023 SPAG11AQ6PDA7 123 aa5.99□□□□□ -1.45
CAPN3-201ENST00000318023 A0A0G2JQZ4 141 aa5.98□□□□□ -1.45
CAPN3-201ENST00000318023 A0A1W2PNN7 141 aa5.98□□□□□ -1.45
CAPN3-201ENST00000318023 RTL8CO15255 209 aa5.98□□□□□ -1.45
CAPN3-201ENST00000318023 SPINK7P58062 85 aa5.98□□□□□ -1.45
CAPN3-201ENST00000318023 C1orf137Q5JT78 98 aa5.98□□□□□ -1.45
CAPN3-201ENST00000318023 COA5Q86WW8 74 aa5.98□□□□□ -1.45
CAPN3-201ENST00000318023 VPREB1P12018 145 aa5.98□□□□□ -1.45
CAPN3-201ENST00000318023 ALMS1Q8TCU4 4167 aa5.97□□□□□ -1.45
CAPN3-201ENST00000318023 DNAH10OSP0CZ25 163 aa5.97□□□□□ -1.45
CAPN3-201ENST00000318023 Q9BRP9 147 aa5.97□□□□□ -1.45
CAPN3-201ENST00000318023 KCNQ1DNQ9H478 68 aa5.97□□□□□ -1.45
CAPN3-201ENST00000318023 PKHD1P08F94 4074 aa5.96□□□□□ -1.46
CAPN3-201ENST00000318023 IGLV5-48A0A075B6I7 105 aa5.96□□□□□ -1.46
CAPN3-201ENST00000318023 H0Y9P7 68 aa5.96□□□□□ -1.46
CAPN3-201ENST00000318023 KIAA1109Q2LD37 5005 aa5.95□□□□□ -1.46
CAPN3-201ENST00000318023 Q8NBF4 154 aa5.95□□□□□ -1.46
CAPN3-201ENST00000318023 C7orf33Q8WU49 177 aa5.94□□□□□ -1.46
CAPN3-201ENST00000318023 RPL37AP61513 92 aaKnown RBP5.94□□□□□ -1.46
CAPN3-201ENST00000318023 Q6ZR54 194 aa5.94□□□□□ -1.46
CAPN3-201ENST00000318023 PRR26Q8N8Z3 221 aa5.94□□□□□ -1.46
CAPN3-201ENST00000318023 SPANXA2-OT1Q8N9U9 137 aa5.94□□□□□ -1.46
CAPN3-201ENST00000318023 LINC01554Q52M75 96 aa5.93□□□□□ -1.46
CAPN3-201ENST00000318023 H3BNG1 76 aa5.92□□□□□ -1.46
CAPN3-201ENST00000318023 IGKV2D-24A0A075B6R9 120 aa5.92□□□□□ -1.46
CAPN3-201ENST00000318023 CAMK2N2Q96S95 79 aa5.91□□□□□ -1.46
CAPN3-201ENST00000318023 PCOTHQ58A44 107 aa5.91□□□□□ -1.46
CAPN3-201ENST00000318023 LELP1Q5T871 98 aa5.9□□□□□ -1.46
CAPN3-201ENST00000318023 SRRM2Q9UQ35 2752 aaKnown RBP5.9□□□□□ -1.46
CAPN3-201ENST00000318023 KRTAP10-2P60368 255 aa5.9□□□□□ -1.47
CAPN3-201ENST00000318023 GVQW2A0A096LPI5 108 aaPredicted RBP5.89□□□□□ -1.47
CAPN3-201ENST00000318023 SPRR4Q96PI1 79 aa5.89□□□□□ -1.47
CAPN3-201ENST00000318023 BIRC6Q9NR09 4857 aa5.89□□□□□ -1.47
CAPN3-201ENST00000318023 RPL37AP8A6NKH3 93 aa5.89□□□□□ -1.47
CAPN3-201ENST00000318023 CASC2Q6XLA1 102 aa5.89□□□□□ -1.47
CAPN3-201ENST00000318023 C9orf163Q8N9P6 203 aa5.89□□□□□ -1.47
CAPN3-201ENST00000318023 FAT2Q9NYQ8 4349 aa5.88□□□□□ -1.47
CAPN3-201ENST00000318023 SERTAD4-AS1Q5TG53 156 aa5.88□□□□□ -1.47
CAPN3-201ENST00000318023 LINC01558Q9Y6Z2 57 aa5.88□□□□□ -1.47
CAPN3-201ENST00000318023 FLG2Q5D862 2391 aaPredicted RBP5.86□□□□□ -1.47
CAPN3-201ENST00000318023 A0A087WSZ3 146 aa5.85□□□□□ -1.47
CAPN3-201ENST00000318023 A0A1B0GW54 56 aa5.85□□□□□ -1.47
CAPN3-201ENST00000318023 LINC01556Q5JQF7 62 aa5.85□□□□□ -1.47
CAPN3-201ENST00000318023 DNAH6Q9C0G6 4158 aa5.85□□□□□ -1.47
CAPN3-201ENST00000318023 DNAH11Q96DT5 4516 aa5.85□□□□□ -1.47
CAPN3-201ENST00000318023 IGLV1-50A0A075B6I6 118 aa5.84□□□□□ -1.47
CAPN3-201ENST00000318023 KRTAP29-1A8MX34 341 aaPredicted RBP5.84□□□□□ -1.47
CAPN3-201ENST00000318023 PLAC8Q9NZF1 115 aa5.84□□□□□ -1.47
CAPN3-201ENST00000318023 DYNC1H1Q14204 4646 aaKnown RBP5.84□□□□□ -1.47
CAPN3-201ENST00000318023 DNAH17Q9UFH2 4485 aa5.84□□□□□ -1.48
CAPN3-201ENST00000318023 IGLV7-46A0A075B6I9 117 aa5.83□□□□□ -1.48
CAPN3-201ENST00000318023 Q6ZRX8 168 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms