RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 A0A0U1RQV1 116 aa12.28□□□□□ -0.44
AP3S1-201ENST00000316788 LYSTQ99698 3801 aa12.27□□□□□ -0.44
AP3S1-201ENST00000316788 IGKV2-24A0A0C4DH68 120 aa12.27□□□□□ -0.45
AP3S1-201ENST00000316788 DSCR10P59022 87 aa12.27□□□□□ -0.45
AP3S1-201ENST00000316788 WWC2-AS2Q96NR7 200 aa12.27□□□□□ -0.45
AP3S1-201ENST00000316788 LCE6AA0A183 80 aa12.25□□□□□ -0.45
AP3S1-201ENST00000316788 SPRR1BP22528 89 aa12.25□□□□□ -0.45
AP3S1-201ENST00000316788 IGFL1Q6UW32 110 aa12.25□□□□□ -0.45
AP3S1-201ENST00000316788 PRLHP81277 87 aa12.24□□□□□ -0.45
AP3S1-201ENST00000316788 C9orf163Q8N9P6 203 aa12.23□□□□□ -0.45
AP3S1-201ENST00000316788 LINC00474Q9P2X8 69 aa12.2□□□□□ -0.46
AP3S1-201ENST00000316788 Q5XG85 94 aa12.2□□□□□ -0.46
AP3S1-201ENST00000316788 HIGD2AQ9BW72 106 aa12.2□□□□□ -0.46
AP3S1-201ENST00000316788 LRCOL1A6NCL2 159 aa12.19□□□□□ -0.46
AP3S1-201ENST00000316788 K7EQZ3 153 aa12.18□□□□□ -0.46
AP3S1-201ENST00000316788 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.17□□□□□ -0.46
AP3S1-201ENST00000316788 UBE2AP49459 152 aa12.17□□□□□ -0.46
AP3S1-201ENST00000316788 TENM2Q9NT68 2774 aa12.17□□□□□ -0.46
AP3S1-201ENST00000316788 PHF5AQ7RTV0 110 aaKnown RBP12.17□□□□□ -0.46
AP3S1-201ENST00000316788 NBDYA0A0U1RRE5 68 aa12.16□□□□□ -0.46
AP3S1-201ENST00000316788 NUPR2A6NF83 97 aa12.16□□□□□ -0.46
AP3S1-201ENST00000316788 C5orf47Q569G3 176 aa12.15□□□□□ -0.46
AP3S1-201ENST00000316788 HCG22E2RYF7 251 aa12.14□□□□□ -0.47
AP3S1-201ENST00000316788 CHTF8P0CG12 524 aa12.14□□□□□ -0.47
AP3S1-201ENST00000316788 KRTAP11-1Q8IUC1 163 aa12.14□□□□□ -0.47
AP3S1-201ENST00000316788 SMIM26A0A096LP01 95 aa12.13□□□□□ -0.47
AP3S1-201ENST00000316788 Q6ZRN7 208 aaPredicted RBP12.13□□□□□ -0.47
AP3S1-201ENST00000316788 FAM30AQ9NZY2 134 aa12.13□□□□□ -0.47
AP3S1-201ENST00000316788 A0A087WSZ3 146 aa12.11□□□□□ -0.47
AP3S1-201ENST00000316788 VPS13DQ5THJ4 4388 aa12.11□□□□□ -0.47
AP3S1-201ENST00000316788 ZCCHC13Q8WW36 166 aaKnown RBP12.09□□□□□ -0.47
AP3S1-201ENST00000316788 SACSQ9NZJ4 4579 aa12.09□□□□□ -0.47
AP3S1-201ENST00000316788 KRTAP13-1Q8IUC0 172 aa12.08□□□□□ -0.47
AP3S1-201ENST00000316788 A0A0G2JQZ4 141 aa12.07□□□□□ -0.48
AP3S1-201ENST00000316788 C4orf26Q17RF5 130 aa12.06□□□□□ -0.48
AP3S1-201ENST00000316788 KMT2CQ8NEZ4 4911 aaKnown RBP12.05□□□□□ -0.48
AP3S1-201ENST00000316788 KMT2AQ03164 3969 aa12.04□□□□□ -0.48
AP3S1-201ENST00000316788 ALMS1Q8TCU4 4167 aa12.04□□□□□ -0.48
AP3S1-201ENST00000316788 HYDINQ4G0P3 5121 aa12.03□□□□□ -0.48
AP3S1-201ENST00000316788 SPACA4Q8TDM5 124 aa12.02□□□□□ -0.49
AP3S1-201ENST00000316788 KRTAP29-1A8MX34 341 aaPredicted RBP12.01□□□□□ -0.49
AP3S1-201ENST00000316788 LINC00472Q9H8W2 130 aa12.01□□□□□ -0.49
AP3S1-201ENST00000316788 DNAH10Q8IVF4 4471 aa12□□□□□ -0.49
AP3S1-201ENST00000316788 FP248Q71RG6 208 aaPredicted RBP12□□□□□ -0.49
AP3S1-201ENST00000316788 PRR15Q8IV56 129 aa12□□□□□ -0.49
AP3S1-201ENST00000316788 A8MWP4 228 aa11.99□□□□□ -0.49
AP3S1-201ENST00000316788 PANO1I0J062 215 aa11.99□□□□□ -0.49
AP3S1-201ENST00000316788 HRCT1Q6UXD1 115 aa11.99□□□□□ -0.49
AP3S1-201ENST00000316788 RPL37AP61513 92 aaKnown RBP11.97□□□□□ -0.49
AP3S1-201ENST00000316788 DEFB116Q30KQ4 102 aa11.97□□□□□ -0.49
AP3S1-201ENST00000316788 LINC00483Q53H64 154 aa11.95□□□□□ -0.5
AP3S1-201ENST00000316788 NDUFB1O75438 58 aa11.94□□□□□ -0.5
AP3S1-201ENST00000316788 A0A087WTM6 91 aa11.94□□□□□ -0.5
AP3S1-201ENST00000316788 H3BPC8 53 aa11.94□□□□□ -0.5
AP3S1-201ENST00000316788 WFDC13Q8IUB5 93 aa11.94□□□□□ -0.5
AP3S1-201ENST00000316788 LY6G6CO95867 125 aa11.93□□□□□ -0.5
AP3S1-201ENST00000316788 MP68P56378 58 aa11.93□□□□□ -0.5
AP3S1-201ENST00000316788 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.93□□□□□ -0.5
AP3S1-201ENST00000316788 CASC2Q6XLA1 102 aa11.92□□□□□ -0.5
AP3S1-201ENST00000316788 DNAH2Q9P225 4427 aa11.92□□□□□ -0.5
AP3S1-201ENST00000316788 RYR2Q92736 4967 aa11.92□□□□□ -0.5
AP3S1-201ENST00000316788 CYP4F30PQ9H0H9 118 aa11.91□□□□□ -0.5
AP3S1-201ENST00000316788 ZNF706Q9Y5V0 76 aaPredicted RBP11.91□□□□□ -0.5
AP3S1-201ENST00000316788 DNAH6Q9C0G6 4158 aa11.9□□□□□ -0.5
AP3S1-201ENST00000316788 hDV103S1A0JD37 113 aa11.89□□□□□ -0.51
AP3S1-201ENST00000316788 RYR3Q15413 4870 aa11.88□□□□□ -0.51
AP3S1-201ENST00000316788 Q6ZR54 194 aa11.86□□□□□ -0.51
AP3S1-201ENST00000316788 TRAV22A0A0B4J277 110 aa11.85□□□□□ -0.51
AP3S1-201ENST00000316788 FAM229BQ4G0N7 80 aa11.85□□□□□ -0.51
AP3S1-201ENST00000316788 PLAC8Q9NZF1 115 aa11.85□□□□□ -0.51
AP3S1-201ENST00000316788 RTL8CO15255 209 aa11.83□□□□□ -0.52
AP3S1-201ENST00000316788 IGLV5-52A0A0A0MRZ9 124 aa11.83□□□□□ -0.52
AP3S1-201ENST00000316788 MMP24-AS1A0A0U1RRL7 71 aa11.83□□□□□ -0.52
AP3S1-201ENST00000316788 H0Y9P7 68 aa11.81□□□□□ -0.52
AP3S1-201ENST00000316788 Q96NJ1 140 aa11.81□□□□□ -0.52
AP3S1-201ENST00000316788 ASB16-AS1Q495Z4 193 aa11.8□□□□□ -0.52
AP3S1-201ENST00000316788 SPANXA2-OT1Q8N9U9 137 aa11.8□□□□□ -0.52
AP3S1-201ENST00000316788 C1orf64Q8NEQ6 169 aa11.8□□□□□ -0.52
AP3S1-201ENST00000316788 LINC00208Q96KT6 92 aa11.79□□□□□ -0.52
AP3S1-201ENST00000316788 PSORS1C2Q9UIG4 136 aa11.79□□□□□ -0.52
AP3S1-201ENST00000316788 IGLV9-49A0A0B4J1Y8 123 aa11.78□□□□□ -0.52
AP3S1-201ENST00000316788 MOBPQ13875 183 aa11.78□□□□□ -0.52
AP3S1-201ENST00000316788 ZNF861PO60384 105 aa11.77□□□□□ -0.52
AP3S1-201ENST00000316788 FRAS1Q86XX4 4008 aa11.76□□□□□ -0.53
AP3S1-201ENST00000316788 DNAH17Q9UFH2 4485 aa11.75□□□□□ -0.53
AP3S1-201ENST00000316788 TP53AIP1Q9HCN2 124 aa11.74□□□□□ -0.53
AP3S1-201ENST00000316788 LINC00336Q6ZUF6 198 aa11.73□□□□□ -0.53
AP3S1-201ENST00000316788 PRO0628Q9UI54 55 aa11.72□□□□□ -0.53
AP3S1-201ENST00000316788 Q1T7F1 81 aa11.72□□□□□ -0.53
AP3S1-201ENST00000316788 FAT2Q9NYQ8 4349 aa11.71□□□□□ -0.53
AP3S1-201ENST00000316788 MPLKIPQ8TAP9 179 aa11.7□□□□□ -0.54
AP3S1-201ENST00000316788 C8orf17Q9NRJ1 99 aa11.7□□□□□ -0.54
AP3S1-201ENST00000316788 C1orf134Q5TEV5 83 aa11.69□□□□□ -0.54
AP3S1-201ENST00000316788 A0A1B0GVX0 72 aa11.68□□□□□ -0.54
AP3S1-201ENST00000316788 DNAH11Q96DT5 4516 aa11.64□□□□□ -0.55
AP3S1-201ENST00000316788 CDK2AP2O75956 126 aa11.63□□□□□ -0.55
AP3S1-201ENST00000316788 IGLV7-43P04211 117 aa11.63□□□□□ -0.55
AP3S1-201ENST00000316788 PRR4Q16378 134 aa11.62□□□□□ -0.55
AP3S1-201ENST00000316788 CD164Q04900 197 aa11.61□□□□□ -0.55
AP3S1-201ENST00000316788 V9GYY9 64 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms