RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 IGLV6-57P01721 117 aa7.71□□□□□ -1.18
LDLRAD3-201ENST00000315571 DEFB4AO15263 64 aa7.7□□□□□ -1.18
LDLRAD3-201ENST00000315571 Q75L30 129 aa7.7□□□□□ -1.18
LDLRAD3-201ENST00000315571 RETNLBQ9BQ08 111 aa7.7□□□□□ -1.18
LDLRAD3-201ENST00000315571 ELOF1P60002 83 aaKnown RBP7.69□□□□□ -1.18
LDLRAD3-201ENST00000315571 NBEAL2Q6ZNJ1 2754 aa7.69□□□□□ -1.18
LDLRAD3-201ENST00000315571 PRR26Q8N8Z3 221 aa7.69□□□□□ -1.18
LDLRAD3-201ENST00000315571 ZNF706Q9Y5V0 76 aaPredicted RBP7.68□□□□□ -1.18
LDLRAD3-201ENST00000315571 Q8NAQ8 132 aa7.67□□□□□ -1.18
LDLRAD3-201ENST00000315571 DNAH3Q8TD57 4116 aa7.67□□□□□ -1.18
LDLRAD3-201ENST00000315571 H0Y9J4 135 aa7.66□□□□□ -1.18
LDLRAD3-201ENST00000315571 SPART-AS1P0CW21 52 aa7.65□□□□□ -1.18
LDLRAD3-201ENST00000315571 SPINK7P58062 85 aa7.64□□□□□ -1.19
LDLRAD3-201ENST00000315571 RPL37AP8A6NKH3 93 aa7.63□□□□□ -1.19
LDLRAD3-201ENST00000315571 RPL37AP61513 92 aaKnown RBP7.63□□□□□ -1.19
LDLRAD3-201ENST00000315571 ADM2Q7Z4H4 148 aa7.63□□□□□ -1.19
LDLRAD3-201ENST00000315571 ZCCHC13Q8WW36 166 aaKnown RBP7.63□□□□□ -1.19
LDLRAD3-201ENST00000315571 PRO0255Q9UI72 69 aa7.62□□□□□ -1.19
LDLRAD3-201ENST00000315571 A0A1B0GUV1 79 aa7.62□□□□□ -1.19
LDLRAD3-201ENST00000315571 A0A087WSZ3 146 aa7.61□□□□□ -1.19
LDLRAD3-201ENST00000315571 Q8NBF4 154 aa7.61□□□□□ -1.19
LDLRAD3-201ENST00000315571 A0A1W2PNM2 257 aa7.61□□□□□ -1.19
LDLRAD3-201ENST00000315571 DSCR10P59022 87 aa7.61□□□□□ -1.19
LDLRAD3-201ENST00000315571 A0A0G2JQZ4 141 aa7.6□□□□□ -1.19
LDLRAD3-201ENST00000315571 A0A1W2PNN7 141 aa7.6□□□□□ -1.19
LDLRAD3-201ENST00000315571 LINC00528Q8N1L1 170 aa7.59□□□□□ -1.19
LDLRAD3-201ENST00000315571 C6orf48Q9UBA6 75 aa7.59□□□□□ -1.19
LDLRAD3-201ENST00000315571 MEGF8Q7Z7M0 2845 aa7.59□□□□□ -1.19
LDLRAD3-201ENST00000315571 Q8N377 158 aa7.58□□□□□ -1.2
LDLRAD3-201ENST00000315571 Q9BRP9 147 aa7.58□□□□□ -1.2
LDLRAD3-201ENST00000315571 A0A096LNI7 61 aa7.58□□□□□ -1.2
LDLRAD3-201ENST00000315571 SPANXA2-OT1Q8N9U9 137 aa7.57□□□□□ -1.2
LDLRAD3-201ENST00000315571 TENM3Q9P273 2699 aa7.57□□□□□ -1.2
LDLRAD3-201ENST00000315571 C7orf33Q8WU49 177 aa7.56□□□□□ -1.2
LDLRAD3-201ENST00000315571 KCNQ1DNQ9H478 68 aa7.56□□□□□ -1.2
LDLRAD3-201ENST00000315571 DHRS4-AS1Q9P1J3 65 aa7.54□□□□□ -1.2
LDLRAD3-201ENST00000315571 DEFB131BA0A096LNP1 70 aa7.53□□□□□ -1.2
LDLRAD3-201ENST00000315571 LCE6AA0A183 80 aa7.52□□□□□ -1.21
LDLRAD3-201ENST00000315571 H3BPC8 53 aa7.52□□□□□ -1.21
LDLRAD3-201ENST00000315571 IGKV2D-24A0A075B6R9 120 aa7.51□□□□□ -1.21
LDLRAD3-201ENST00000315571 LINC00476Q8WZB0 136 aa7.51□□□□□ -1.21
LDLRAD3-201ENST00000315571 STAB2Q8WWQ8 2551 aa7.51□□□□□ -1.21
LDLRAD3-201ENST00000315571 LINC01558Q9Y6Z2 57 aa7.5□□□□□ -1.21
LDLRAD3-201ENST00000315571 A0A1B0GW54 56 aa7.5□□□□□ -1.21
LDLRAD3-201ENST00000315571 HUWE1Q7Z6Z7 4374 aaKnown RBP7.5□□□□□ -1.21
LDLRAD3-201ENST00000315571 FBN3Q75N90 2809 aa7.5□□□□□ -1.21
LDLRAD3-201ENST00000315571 CSAG1Q6PB30 78 aa7.49□□□□□ -1.21
LDLRAD3-201ENST00000315571 DNAH9Q9NYC9 4486 aa7.49□□□□□ -1.21
LDLRAD3-201ENST00000315571 IGLV5-48A0A075B6I7 105 aa7.48□□□□□ -1.21
LDLRAD3-201ENST00000315571 CDK2AP2O75956 126 aa7.47□□□□□ -1.21
LDLRAD3-201ENST00000315571 PRKDCP78527 4128 aaKnown RBP7.47□□□□□ -1.21
LDLRAD3-201ENST00000315571 H3BNG1 76 aa7.46□□□□□ -1.22
LDLRAD3-201ENST00000315571 C1orf134Q5TEV5 83 aa7.46□□□□□ -1.22
LDLRAD3-201ENST00000315571 A0A1B0GU69 56 aa7.45□□□□□ -1.22
LDLRAD3-201ENST00000315571 COL7A1Q02388 2944 aa7.45□□□□□ -1.22
LDLRAD3-201ENST00000315571 IGLV7-46A0A075B6I9 117 aa7.44□□□□□ -1.22
LDLRAD3-201ENST00000315571 NUPR2A6NF83 97 aa7.44□□□□□ -1.22
LDLRAD3-201ENST00000315571 Q6ZRX8 168 aa7.42□□□□□ -1.22
LDLRAD3-201ENST00000315571 WWC2-AS2Q96NR7 200 aa7.41□□□□□ -1.22
LDLRAD3-201ENST00000315571 IGLV8-61A0A075B6I0 122 aa7.41□□□□□ -1.22
LDLRAD3-201ENST00000315571 GVQW2A0A096LPI5 108 aaPredicted RBP7.4□□□□□ -1.23
LDLRAD3-201ENST00000315571 LELP1Q5T871 98 aa7.39□□□□□ -1.23
LDLRAD3-201ENST00000315571 PLA2G1BP04054 148 aaKnown RBP7.39□□□□□ -1.23
LDLRAD3-201ENST00000315571 SPRR4Q96PI1 79 aa7.39□□□□□ -1.23
LDLRAD3-201ENST00000315571 TGP01266 2768 aa7.38□□□□□ -1.23
LDLRAD3-201ENST00000315571 IGFL1Q6UW32 110 aa7.38□□□□□ -1.23
LDLRAD3-201ENST00000315571 IGLV1-50A0A075B6I6 118 aa7.38□□□□□ -1.23
LDLRAD3-201ENST00000315571 MIR22HGQ0VDD5 57 aa7.37□□□□□ -1.23
LDLRAD3-201ENST00000315571 UBE2DNLQ8IWF7 75 aa7.37□□□□□ -1.23
LDLRAD3-201ENST00000315571 HRES1P13985 223 aa7.36□□□□□ -1.23
LDLRAD3-201ENST00000315571 APLNQ9ULZ1 77 aa7.36□□□□□ -1.23
LDLRAD3-201ENST00000315571 PRLHP81277 87 aa7.36□□□□□ -1.23
LDLRAD3-201ENST00000315571 C9orf163Q8N9P6 203 aa7.35□□□□□ -1.23
LDLRAD3-201ENST00000315571 A8MWP4 228 aa7.35□□□□□ -1.23
LDLRAD3-201ENST00000315571 FLG2Q5D862 2391 aaPredicted RBP7.34□□□□□ -1.23
LDLRAD3-201ENST00000315571 IGHV6-1A0A0B4J1U7 121 aa7.34□□□□□ -1.23
LDLRAD3-201ENST00000315571 FAM168BA1KXE4 195 aa7.34□□□□□ -1.24
LDLRAD3-201ENST00000315571 IGKV2-24A0A0C4DH68 120 aa7.33□□□□□ -1.24
LDLRAD3-201ENST00000315571 UQCR11O14957 56 aa7.33□□□□□ -1.24
LDLRAD3-201ENST00000315571 CNBPP62633 177 aaKnown RBP7.32□□□□□ -1.24
LDLRAD3-201ENST00000315571 REG3GQ6UW15 175 aa7.31□□□□□ -1.24
LDLRAD3-201ENST00000315571 ACYP2P14621 99 aa7.31□□□□□ -1.24
LDLRAD3-201ENST00000315571 CASC10Q5T4H9 136 aa7.3□□□□□ -1.24
LDLRAD3-201ENST00000315571 TP53AIP1Q9HCN2 124 aa7.3□□□□□ -1.24
LDLRAD3-201ENST00000315571 LINC01556Q5JQF7 62 aa7.29□□□□□ -1.24
LDLRAD3-201ENST00000315571 Q6ZR54 194 aa7.28□□□□□ -1.24
LDLRAD3-201ENST00000315571 KRTAP29-1A8MX34 341 aaPredicted RBP7.27□□□□□ -1.25
LDLRAD3-201ENST00000315571 DNAH10OSP0CZ25 163 aa7.27□□□□□ -1.25
LDLRAD3-201ENST00000315571 TNP2Q05952 138 aa7.26□□□□□ -1.25
LDLRAD3-201ENST00000315571 LY6G6CO95867 125 aa7.25□□□□□ -1.25
LDLRAD3-201ENST00000315571 PRR34Q9NV39 138 aa7.25□□□□□ -1.25
LDLRAD3-201ENST00000315571 SPINK6Q6UWN8 80 aa7.25□□□□□ -1.25
LDLRAD3-201ENST00000315571 DNAH7Q8WXX0 4024 aa7.25□□□□□ -1.25
LDLRAD3-201ENST00000315571 TENM2Q9NT68 2774 aa7.24□□□□□ -1.25
LDLRAD3-201ENST00000315571 IGLV5-37A0A075B6J1 123 aa7.23□□□□□ -1.25
LDLRAD3-201ENST00000315571 IGLV9-49A0A0B4J1Y8 123 aa7.23□□□□□ -1.25
LDLRAD3-201ENST00000315571 C15orf56Q8N910 161 aa7.22□□□□□ -1.25
LDLRAD3-201ENST00000315571 DYNC2H1Q8NCM8 4307 aaKnown RBP7.22□□□□□ -1.25
LDLRAD3-201ENST00000315571 SPINK1P00995 79 aa7.21□□□□□ -1.25
LDLRAD3-201ENST00000315571 STARD9Q9P2P6 4700 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms