RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 DNAH7Q8WXX0 4024 aa3.72□□□□□ -1.81
ZNF440-201ENST00000304060 hDV103S1A0JD37 113 aa3.72□□□□□ -1.81
ZNF440-201ENST00000304060 PANO1I0J062 215 aa3.72□□□□□ -1.81
ZNF440-201ENST00000304060 FAM218AQ96MZ4 157 aa3.72□□□□□ -1.81
ZNF440-201ENST00000304060 RBM12B-AS1Q9P1G2 102 aa3.72□□□□□ -1.81
ZNF440-201ENST00000304060 CYP4F30PQ9H0H9 118 aa3.71□□□□□ -1.81
ZNF440-201ENST00000304060 DYNC1H1Q14204 4646 aaKnown RBP3.71□□□□□ -1.82
ZNF440-201ENST00000304060 Q6ZVQ6 151 aa3.7□□□□□ -1.82
ZNF440-201ENST00000304060 SPACA4Q8TDM5 124 aa3.7□□□□□ -1.82
ZNF440-201ENST00000304060 CDC42SE2Q9NRR3 84 aa3.7□□□□□ -1.82
ZNF440-201ENST00000304060 A6NN06 94 aa3.7□□□□□ -1.82
ZNF440-201ENST00000304060 H0YGX0 51 aa3.7□□□□□ -1.82
ZNF440-201ENST00000304060 CHTF8P0CG12 524 aa3.7□□□□□ -1.82
ZNF440-201ENST00000304060 LINC00308Q8TCZ7 52 aa3.7□□□□□ -1.82
ZNF440-201ENST00000304060 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.7□□□□□ -1.82
ZNF440-201ENST00000304060 A0A087WVE0 104 aa3.7□□□□□ -1.82
ZNF440-201ENST00000304060 IGLV4-3A0A075B6K6 122 aa3.7□□□□□ -1.82
ZNF440-201ENST00000304060 JMJD7-PLA2G4BH0Y9G9 81 aa3.7□□□□□ -1.82
ZNF440-201ENST00000304060 C9orf116Q5BN46 136 aaPredicted RBP3.7□□□□□ -1.82
ZNF440-201ENST00000304060 ENHOQ6UWT2 76 aa3.7□□□□□ -1.82
ZNF440-201ENST00000304060 C20orf197Q8N268 126 aa3.7□□□□□ -1.82
ZNF440-201ENST00000304060 M0R378 163 aa3.69□□□□□ -1.82
ZNF440-201ENST00000304060 ASB16-AS1Q495Z4 193 aa3.69□□□□□ -1.82
ZNF440-201ENST00000304060 Q8IZM0 81 aa3.69□□□□□ -1.82
ZNF440-201ENST00000304060 DNAH6Q9C0G6 4158 aa3.69□□□□□ -1.82
ZNF440-201ENST00000304060 ZCCHC13Q8WW36 166 aaKnown RBP3.68□□□□□ -1.82
ZNF440-201ENST00000304060 IGLV4-60A0A075B6I1 120 aa3.68□□□□□ -1.82
ZNF440-201ENST00000304060 PRR34Q9NV39 138 aa3.68□□□□□ -1.82
ZNF440-201ENST00000304060 C9orf129Q5T035 196 aaKnown RBP3.68□□□□□ -1.82
ZNF440-201ENST00000304060 MRPL55Q7Z7F7 128 aaKnown RBP3.68□□□□□ -1.82
ZNF440-201ENST00000304060 H3BQ85 93 aa3.67□□□□□ -1.82
ZNF440-201ENST00000304060 XAGE1AQ9HD64 81 aa3.67□□□□□ -1.82
ZNF440-201ENST00000304060 KIAA0087Q14695 138 aa3.67□□□□□ -1.82
ZNF440-201ENST00000304060 DNAH17Q9UFH2 4485 aa3.67□□□□□ -1.82
ZNF440-201ENST00000304060 GVQW2A0A096LPI5 108 aaPredicted RBP3.67□□□□□ -1.82
ZNF440-201ENST00000304060 SOSTDC1Q6X4U4 206 aa3.66□□□□□ -1.82
ZNF440-201ENST00000304060 C14orf132Q9NPU4 83 aa3.66□□□□□ -1.82
ZNF440-201ENST00000304060 COX17Q14061 63 aa3.66□□□□□ -1.82
ZNF440-201ENST00000304060 ATP11AUNQ6ZP68 121 aa3.66□□□□□ -1.82
ZNF440-201ENST00000304060 OCR1Q9BZK8 76 aa3.66□□□□□ -1.82
ZNF440-201ENST00000304060 VPS13DQ5THJ4 4388 aa3.66□□□□□ -1.82
ZNF440-201ENST00000304060 MT1HL1P0DM35 61 aa3.65□□□□□ -1.82
ZNF440-201ENST00000304060 TYMSOSQ8TAI1 123 aa3.65□□□□□ -1.82
ZNF440-201ENST00000304060 IGLV7-43P04211 117 aa3.65□□□□□ -1.83
ZNF440-201ENST00000304060 Q8N3U1 123 aa3.65□□□□□ -1.83
ZNF440-201ENST00000304060 TRAV23DV6A0A075B6W5 121 aa3.65□□□□□ -1.83
ZNF440-201ENST00000304060 C8orf87E5RJ46 101 aa3.65□□□□□ -1.83
ZNF440-201ENST00000304060 UNQ6190/PRO20217Q6UXQ8 127 aa3.65□□□□□ -1.83
ZNF440-201ENST00000304060 CDKN2A-AS1Q9UH64 79 aa3.65□□□□□ -1.83
ZNF440-201ENST00000304060 ABCA13Q86UQ4 5058 aa3.64□□□□□ -1.83
ZNF440-201ENST00000304060 H0Y9J4 135 aa3.64□□□□□ -1.83
ZNF440-201ENST00000304060 Q6ZQT0 140 aa3.64□□□□□ -1.83
ZNF440-201ENST00000304060 KRTAP10-8P60410 259 aa3.64□□□□□ -1.83
ZNF440-201ENST00000304060 LIMD2Q9BT23 127 aa3.64□□□□□ -1.83
ZNF440-201ENST00000304060 SND1-IT1Q9HBX3 110 aa3.64□□□□□ -1.83
ZNF440-201ENST00000304060 A0A096LNI7 61 aa3.64□□□□□ -1.83
ZNF440-201ENST00000304060 SLPIP03973 132 aa3.64□□□□□ -1.83
ZNF440-201ENST00000304060 PDE6GP18545 87 aa3.64□□□□□ -1.83
ZNF440-201ENST00000304060 TMEM254Q8TBM7 123 aa3.64□□□□□ -1.83
ZNF440-201ENST00000304060 IGKV2-28A0A075B6P5 120 aa3.63□□□□□ -1.83
ZNF440-201ENST00000304060 IGKV2D-28P01615 120 aa3.63□□□□□ -1.83
ZNF440-201ENST00000304060 SEC61BP60468 96 aaKnown RBP3.63□□□□□ -1.83
ZNF440-201ENST00000304060 SPAG11AQ6PDA7 123 aa3.63□□□□□ -1.83
ZNF440-201ENST00000304060 RBM3P98179 157 aaKnown RBP3.63□□□□□ -1.83
ZNF440-201ENST00000304060 ORMDL1Q9P0S3 153 aa3.63□□□□□ -1.83
ZNF440-201ENST00000304060 LOC101927531A0A1B0GV80 90 aa3.63□□□□□ -1.83
ZNF440-201ENST00000304060 MIR7-3HGQ8N6C7 128 aa3.63□□□□□ -1.83
ZNF440-201ENST00000304060 Q5VV11 94 aa3.62□□□□□ -1.83
ZNF440-201ENST00000304060 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
ZNF440-201ENST00000304060 NTM-AS1Q6ZSK4 140 aa3.62□□□□□ -1.83
ZNF440-201ENST00000304060 NCR3O14931 201 aa3.62□□□□□ -1.83
ZNF440-201ENST00000304060 COX7BP24311 80 aa3.62□□□□□ -1.83
ZNF440-201ENST00000304060 ELOF1P60002 83 aaKnown RBP3.62□□□□□ -1.83
ZNF440-201ENST00000304060 LCA10Q71F78 164 aa3.62□□□□□ -1.83
ZNF440-201ENST00000304060 DHRS4-AS1Q9P1J3 65 aa3.62□□□□□ -1.83
ZNF440-201ENST00000304060 TMEM256-PLSCR3K7ERE1 68 aa3.62□□□□□ -1.83
ZNF440-201ENST00000304060 DEFB105AQ8NG35 78 aa3.62□□□□□ -1.83
ZNF440-201ENST00000304060 IGLV7-46A0A075B6I9 117 aa3.61□□□□□ -1.83
ZNF440-201ENST00000304060 C7orf65Q6ZTY9 151 aa3.61□□□□□ -1.83
ZNF440-201ENST00000304060 TRAV22A0A0B4J277 110 aa3.61□□□□□ -1.83
ZNF440-201ENST00000304060 ZNF73O43830 326 aaPredicted RBP3.61□□□□□ -1.83
ZNF440-201ENST00000304060 KRTAP10-4P60372 401 aaPredicted RBP3.61□□□□□ -1.83
ZNF440-201ENST00000304060 UBL5Q9BZL1 73 aa3.61□□□□□ -1.83
ZNF440-201ENST00000304060 LINC00242Q5T6M2 205 aa3.61□□□□□ -1.83
ZNF440-201ENST00000304060 Q9BRP9 147 aa3.61□□□□□ -1.83
ZNF440-201ENST00000304060 RPL37AP8A6NKH3 93 aa3.6□□□□□ -1.83
ZNF440-201ENST00000304060 SNURFQ9Y675 71 aa3.6□□□□□ -1.83
ZNF440-201ENST00000304060 NREPQ16612 68 aa3.6□□□□□ -1.83
ZNF440-201ENST00000304060 LINC00304Q8N9R0 145 aa3.6□□□□□ -1.83
ZNF440-201ENST00000304060 MPLKIPQ8TAP9 179 aa3.6□□□□□ -1.83
ZNF440-201ENST00000304060 A0A1B0GW54 56 aa3.59□□□□□ -1.83
ZNF440-201ENST00000304060 NDUFB1O75438 58 aa3.59□□□□□ -1.83
ZNF440-201ENST00000304060 SMIM11BQ8TCY0 68 aa3.59□□□□□ -1.83
ZNF440-201ENST00000304060 PRAC1Q96KF2 57 aa3.59□□□□□ -1.83
ZNF440-201ENST00000304060 KRTAP9-2Q9BYQ4 174 aa3.59□□□□□ -1.84
ZNF440-201ENST00000304060 LRP1BQ9NZR2 4599 aa3.59□□□□□ -1.84
ZNF440-201ENST00000304060 SMIM1B2RUZ4 78 aa3.59□□□□□ -1.84
ZNF440-201ENST00000304060 C15orf56Q8N910 161 aa3.58□□□□□ -1.84
ZNF440-201ENST00000304060 DNAH5Q8TE73 4624 aa3.58□□□□□ -1.84
ZNF440-201ENST00000304060 IGHV3OR16-9A0A0B4J2B5 98 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms