RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 HIGD2AQ9BW72 106 aa8.19□□□□□ -1.1
HIF3A-204ENST00000300862 PSCAO43653 123 aa8.18□□□□□ -1.1
HIF3A-204ENST00000300862 PRLHP81277 87 aa8.18□□□□□ -1.1
HIF3A-204ENST00000300862 PRR15Q8IV56 129 aa8.17□□□□□ -1.1
HIF3A-204ENST00000300862 MPLKIPQ8TAP9 179 aa8.17□□□□□ -1.1
HIF3A-204ENST00000300862 SMIM29Q86T20 159 aa8.16□□□□□ -1.1
HIF3A-204ENST00000300862 CHTF8P0CG12 524 aa8.16□□□□□ -1.1
HIF3A-204ENST00000300862 UBE2DNLQ8IWF7 75 aa8.16□□□□□ -1.1
HIF3A-204ENST00000300862 Q8NBF4 154 aa8.15□□□□□ -1.1
HIF3A-204ENST00000300862 DNAH7Q8WXX0 4024 aa8.14□□□□□ -1.11
HIF3A-204ENST00000300862 FAM30AQ9NZY2 134 aa8.14□□□□□ -1.11
HIF3A-204ENST00000300862 C16orf90A8MZG2 172 aa8.13□□□□□ -1.11
HIF3A-204ENST00000300862 KRTAP11-1Q8IUC1 163 aa8.13□□□□□ -1.11
HIF3A-204ENST00000300862 LINC00476Q8WZB0 136 aa8.13□□□□□ -1.11
HIF3A-204ENST00000300862 H3BS24 57 aa8.12□□□□□ -1.11
HIF3A-204ENST00000300862 LCE6AA0A183 80 aa8.12□□□□□ -1.11
HIF3A-204ENST00000300862 PHF5AQ7RTV0 110 aaKnown RBP8.11□□□□□ -1.11
HIF3A-204ENST00000300862 APLNQ9ULZ1 77 aa8.11□□□□□ -1.11
HIF3A-204ENST00000300862 CNBPP62633 177 aaKnown RBP8.1□□□□□ -1.11
HIF3A-204ENST00000300862 DEFB116Q30KQ4 102 aa8.1□□□□□ -1.11
HIF3A-204ENST00000300862 SPRR4Q96PI1 79 aa8.1□□□□□ -1.11
HIF3A-204ENST00000300862 DSCR10P59022 87 aa8.09□□□□□ -1.11
HIF3A-204ENST00000300862 IGFL1Q6UW32 110 aa8.09□□□□□ -1.12
HIF3A-204ENST00000300862 K7EQZ3 153 aa8.08□□□□□ -1.12
HIF3A-204ENST00000300862 hDV103S1A0JD37 113 aa8.08□□□□□ -1.12
HIF3A-204ENST00000300862 ZCCHC13Q8WW36 166 aaKnown RBP8.07□□□□□ -1.12
HIF3A-204ENST00000300862 PLECQ15149 4684 aaKnown RBP8.06□□□□□ -1.12
HIF3A-204ENST00000300862 A0A1B0GW54 56 aa8.06□□□□□ -1.12
HIF3A-204ENST00000300862 RBM12B-AS1Q9P1G2 102 aa8.05□□□□□ -1.12
HIF3A-204ENST00000300862 MDFIQ99750 246 aa8.05□□□□□ -1.12
HIF3A-204ENST00000300862 A0A087WSZ3 146 aa8.04□□□□□ -1.12
HIF3A-204ENST00000300862 LRCOL1A6NCL2 159 aa8.04□□□□□ -1.12
HIF3A-204ENST00000300862 PANO1I0J062 215 aa8.04□□□□□ -1.12
HIF3A-204ENST00000300862 UBE2AP49459 152 aa8.04□□□□□ -1.12
HIF3A-204ENST00000300862 C1orf64Q8NEQ6 169 aa8.04□□□□□ -1.12
HIF3A-204ENST00000300862 C14orf177Q52M58 125 aa8.01□□□□□ -1.13
HIF3A-204ENST00000300862 C9orf163Q8N9P6 203 aa8□□□□□ -1.13
HIF3A-204ENST00000300862 NBDYA0A0U1RRE5 68 aa8□□□□□ -1.13
HIF3A-204ENST00000300862 RPL37AP61513 92 aaKnown RBP8□□□□□ -1.13
HIF3A-204ENST00000300862 B9D2Q9BPU9 175 aa7.99□□□□□ -1.13
HIF3A-204ENST00000300862 DYNC2H1Q8NCM8 4307 aaKnown RBP7.99□□□□□ -1.13
HIF3A-204ENST00000300862 Q1T7F1 81 aa7.98□□□□□ -1.13
HIF3A-204ENST00000300862 HCG22E2RYF7 251 aa7.98□□□□□ -1.13
HIF3A-204ENST00000300862 PRR4Q16378 134 aa7.98□□□□□ -1.13
HIF3A-204ENST00000300862 WFDC13Q8IUB5 93 aa7.98□□□□□ -1.13
HIF3A-204ENST00000300862 IGLV8-61A0A075B6I0 122 aa7.97□□□□□ -1.13
HIF3A-204ENST00000300862 Q6ZRN7 208 aaPredicted RBP7.96□□□□□ -1.14
HIF3A-204ENST00000300862 STARD9Q9P2P6 4700 aa7.96□□□□□ -1.14
HIF3A-204ENST00000300862 KTN1-AS1Q86SY8 53 aa7.95□□□□□ -1.14
HIF3A-204ENST00000300862 CYP4F30PQ9H0H9 118 aa7.95□□□□□ -1.14
HIF3A-204ENST00000300862 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.94□□□□□ -1.14
HIF3A-204ENST00000300862 PSPHP1O15172 72 aa7.93□□□□□ -1.14
HIF3A-204ENST00000300862 PRKDCP78527 4128 aaKnown RBP7.93□□□□□ -1.14
HIF3A-204ENST00000300862 TRAV22A0A0B4J277 110 aa7.92□□□□□ -1.14
HIF3A-204ENST00000300862 H0Y9J4 135 aa7.92□□□□□ -1.14
HIF3A-204ENST00000300862 PRR26Q8N8Z3 221 aa7.92□□□□□ -1.14
HIF3A-204ENST00000300862 NUPR2A6NF83 97 aa7.91□□□□□ -1.14
HIF3A-204ENST00000300862 C8orf87E5RJ46 101 aa7.91□□□□□ -1.14
HIF3A-204ENST00000300862 SPRR1BP22528 89 aa7.91□□□□□ -1.14
HIF3A-204ENST00000300862 IGLV9-49A0A0B4J1Y8 123 aa7.89□□□□□ -1.15
HIF3A-204ENST00000300862 TGP01266 2768 aa7.89□□□□□ -1.15
HIF3A-204ENST00000300862 KMT2AQ03164 3969 aa7.88□□□□□ -1.15
HIF3A-204ENST00000300862 KRTAP13-1Q8IUC0 172 aa7.88□□□□□ -1.15
HIF3A-204ENST00000300862 VPS13DQ5THJ4 4388 aa7.87□□□□□ -1.15
HIF3A-204ENST00000300862 SPACA4Q8TDM5 124 aa7.87□□□□□ -1.15
HIF3A-204ENST00000300862 NDUFB1O75438 58 aa7.87□□□□□ -1.15
HIF3A-204ENST00000300862 LINC00472Q9H8W2 130 aa7.87□□□□□ -1.15
HIF3A-204ENST00000300862 KRTAP29-1A8MX34 341 aaPredicted RBP7.86□□□□□ -1.15
HIF3A-204ENST00000300862 A0A087WTM6 91 aa7.86□□□□□ -1.15
HIF3A-204ENST00000300862 LINC00208Q96KT6 92 aa7.86□□□□□ -1.15
HIF3A-204ENST00000300862 A8MUN3 132 aa7.85□□□□□ -1.15
HIF3A-204ENST00000300862 MP68P56378 58 aa7.85□□□□□ -1.15
HIF3A-204ENST00000300862 FRAS1Q86XX4 4008 aa7.85□□□□□ -1.15
HIF3A-204ENST00000300862 CASC2Q6XLA1 102 aa7.85□□□□□ -1.15
HIF3A-204ENST00000300862 MEGF8Q7Z7M0 2845 aa7.85□□□□□ -1.15
HIF3A-204ENST00000300862 ANAPC11Q9NYG5 84 aa7.84□□□□□ -1.15
HIF3A-204ENST00000300862 HECTD4Q9Y4D8 3996 aa7.84□□□□□ -1.15
HIF3A-204ENST00000300862 A8MWP4 228 aa7.83□□□□□ -1.16
HIF3A-204ENST00000300862 NDUFS5O43920 106 aa7.83□□□□□ -1.16
HIF3A-204ENST00000300862 A8MU10 97 aa7.82□□□□□ -1.16
HIF3A-204ENST00000300862 RTL8CO15255 209 aa7.82□□□□□ -1.16
HIF3A-204ENST00000300862 H0Y9P7 68 aa7.81□□□□□ -1.16
HIF3A-204ENST00000300862 Q5VV11 94 aa7.81□□□□□ -1.16
HIF3A-204ENST00000300862 DNAH2Q9P225 4427 aa7.81□□□□□ -1.16
HIF3A-204ENST00000300862 PSORS1C2Q9UIG4 136 aa7.8□□□□□ -1.16
HIF3A-204ENST00000300862 KRTAP21-3Q3LHN1 58 aa7.79□□□□□ -1.16
HIF3A-204ENST00000300862 SPANXA2-OT1Q8N9U9 137 aa7.79□□□□□ -1.16
HIF3A-204ENST00000300862 FBN3Q75N90 2809 aa7.78□□□□□ -1.16
HIF3A-204ENST00000300862 DNAH8Q96JB1 4490 aa7.77□□□□□ -1.16
HIF3A-204ENST00000300862 MOBPQ13875 183 aa7.77□□□□□ -1.17
HIF3A-204ENST00000300862 MMP24-AS1A0A0U1RRL7 71 aa7.76□□□□□ -1.17
HIF3A-204ENST00000300862 Q8N9P0 234 aaPredicted RBP7.76□□□□□ -1.17
HIF3A-204ENST00000300862 DNHD1Q96M86 4753 aa7.76□□□□□ -1.17
HIF3A-204ENST00000300862 Q96NJ1 140 aa7.76□□□□□ -1.17
HIF3A-204ENST00000300862 IGLV5-52A0A0A0MRZ9 124 aa7.75□□□□□ -1.17
HIF3A-204ENST00000300862 H3BPC8 53 aa7.75□□□□□ -1.17
HIF3A-204ENST00000300862 Q6ZR54 194 aa7.74□□□□□ -1.17
HIF3A-204ENST00000300862 WWC2-AS2Q96NR7 200 aa7.74□□□□□ -1.17
HIF3A-204ENST00000300862 LINC00483Q53H64 154 aa7.74□□□□□ -1.17
HIF3A-204ENST00000300862 DNAH17Q9UFH2 4485 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms