RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 RTL8CO15255 209 aa9□□□□□ -0.97
C9orf3-202ENST00000297979 DHRS4-AS1Q9P1J3 65 aa9□□□□□ -0.97
C9orf3-202ENST00000297979 DNAH6Q9C0G6 4158 aa9□□□□□ -0.97
C9orf3-202ENST00000297979 Q6ZVQ6 151 aa8.99□□□□□ -0.97
C9orf3-202ENST00000297979 ALMS1Q8TCU4 4167 aa8.99□□□□□ -0.97
C9orf3-202ENST00000297979 A0A087WVE0 104 aa8.98□□□□□ -0.97
C9orf3-202ENST00000297979 PANO1I0J062 215 aa8.98□□□□□ -0.97
C9orf3-202ENST00000297979 PHF5AQ7RTV0 110 aaKnown RBP8.98□□□□□ -0.97
C9orf3-202ENST00000297979 Q9BRP9 147 aa8.98□□□□□ -0.97
C9orf3-202ENST00000297979 FUSP35637 526 aaKnown RBP eCLIP8.97□□□□□ -0.97
C9orf3-202ENST00000297979 SPACA4Q8TDM5 124 aa8.97□□□□□ -0.97
C9orf3-202ENST00000297979 DNAH2Q9P225 4427 aa8.97□□□□□ -0.97
C9orf3-202ENST00000297979 UBE2BP63146 152 aa8.96□□□□□ -0.98
C9orf3-202ENST00000297979 LCA10Q71F78 164 aa8.96□□□□□ -0.98
C9orf3-202ENST00000297979 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.96□□□□□ -0.98
C9orf3-202ENST00000297979 IGLV5-52A0A0A0MRZ9 124 aa8.95□□□□□ -0.98
C9orf3-202ENST00000297979 TNP2Q05952 138 aa8.95□□□□□ -0.98
C9orf3-202ENST00000297979 LINC00313P59037 77 aa8.94□□□□□ -0.98
C9orf3-202ENST00000297979 KRTAP11-1Q8IUC1 163 aa8.92□□□□□ -0.98
C9orf3-202ENST00000297979 F8WEM9 126 aa8.92□□□□□ -0.98
C9orf3-202ENST00000297979 DNAH17Q9UFH2 4485 aa8.92□□□□□ -0.98
C9orf3-202ENST00000297979 DEFB105AQ8NG35 78 aa8.91□□□□□ -0.98
C9orf3-202ENST00000297979 LOC110117498A0A087WWA1 95 aa8.91□□□□□ -0.98
C9orf3-202ENST00000297979 ERC2-IT1O76042 136 aa8.9□□□□□ -0.98
C9orf3-202ENST00000297979 ATP5EP56381 51 aaPredicted RBP8.9□□□□□ -0.98
C9orf3-202ENST00000297979 LINC01547P58512 204 aaPredicted RBP8.9□□□□□ -0.98
C9orf3-202ENST00000297979 IGKV3D-7A0A0C4DH55 119 aa8.9□□□□□ -0.98
C9orf3-202ENST00000297979 PRLHP81277 87 aa8.9□□□□□ -0.98
C9orf3-202ENST00000297979 Q8N377 158 aa8.9□□□□□ -0.98
C9orf3-202ENST00000297979 A8MU10 97 aa8.9□□□□□ -0.99
C9orf3-202ENST00000297979 Q6ZQT0 140 aa8.9□□□□□ -0.99
C9orf3-202ENST00000297979 ST20-AS1Q8NBB2 130 aa8.89□□□□□ -0.99
C9orf3-202ENST00000297979 IGLV5-48A0A075B6I7 105 aa8.89□□□□□ -0.99
C9orf3-202ENST00000297979 KLKP1Q107X0 134 aa8.88□□□□□ -0.99
C9orf3-202ENST00000297979 PDE6GP18545 87 aa8.88□□□□□ -0.99
C9orf3-202ENST00000297979 HECTD4Q9Y4D8 3996 aa8.87□□□□□ -0.99
C9orf3-202ENST00000297979 TRBV7-4A0A0J9YYF1 115 aa8.87□□□□□ -0.99
C9orf3-202ENST00000297979 H0Y9J4 135 aa8.86□□□□□ -0.99
C9orf3-202ENST00000297979 HIGD2AQ9BW72 106 aa8.86□□□□□ -0.99
C9orf3-202ENST00000297979 LINC00846Q9NV44 126 aa8.86□□□□□ -0.99
C9orf3-202ENST00000297979 PLAC8Q9NZF1 115 aa8.86□□□□□ -0.99
C9orf3-202ENST00000297979 C7orf65Q6ZTY9 151 aa8.85□□□□□ -0.99
C9orf3-202ENST00000297979 BCE1O60756 84 aa8.85□□□□□ -0.99
C9orf3-202ENST00000297979 KRTAP10-2P60368 255 aa8.85□□□□□ -0.99
C9orf3-202ENST00000297979 UBE2AP49459 152 aa8.84□□□□□ -0.99
C9orf3-202ENST00000297979 Q6JHZ5 121 aa8.84□□□□□ -0.99
C9orf3-202ENST00000297979 SNURFQ9Y675 71 aa8.84□□□□□ -0.99
C9orf3-202ENST00000297979 HYDINQ4G0P3 5121 aa8.84□□□□□ -0.99
C9orf3-202ENST00000297979 FRAS1Q86XX4 4008 aa8.84□□□□□ -1
C9orf3-202ENST00000297979 MP68P56378 58 aa8.83□□□□□ -1
C9orf3-202ENST00000297979 ZNF706Q9Y5V0 76 aaPredicted RBP8.82□□□□□ -1
C9orf3-202ENST00000297979 A6NN06 94 aa8.81□□□□□ -1
C9orf3-202ENST00000297979 Q1T7F1 81 aa8.8□□□□□ -1
C9orf3-202ENST00000297979 KRTAP13-1Q8IUC0 172 aa8.8□□□□□ -1
C9orf3-202ENST00000297979 PSPHP1O15172 72 aa8.8□□□□□ -1
C9orf3-202ENST00000297979 LINC01554Q52M75 96 aa8.79□□□□□ -1
C9orf3-202ENST00000297979 LCE6AA0A183 80 aa8.78□□□□□ -1
C9orf3-202ENST00000297979 NDUFC1O43677 76 aa8.78□□□□□ -1
C9orf3-202ENST00000297979 SMIM29Q86T20 159 aa8.78□□□□□ -1
C9orf3-202ENST00000297979 SPTSSBQ8NFR3 76 aa8.78□□□□□ -1
C9orf3-202ENST00000297979 UBL5Q9BZL1 73 aa8.77□□□□□ -1
C9orf3-202ENST00000297979 PSORS1C2Q9UIG4 136 aa8.77□□□□□ -1.01
C9orf3-202ENST00000297979 DNAH11Q96DT5 4516 aa8.76□□□□□ -1.01
C9orf3-202ENST00000297979 TRAV7A0A075B6U4 112 aa8.75□□□□□ -1.01
C9orf3-202ENST00000297979 C1orf137Q5JT78 98 aa8.75□□□□□ -1.01
C9orf3-202ENST00000297979 FAM30AQ9NZY2 134 aa8.75□□□□□ -1.01
C9orf3-202ENST00000297979 SPRR1BP22528 89 aa8.74□□□□□ -1.01
C9orf3-202ENST00000297979 FAT2Q9NYQ8 4349 aa8.74□□□□□ -1.01
C9orf3-202ENST00000297979 KRTAP10-1P60331 282 aa8.73□□□□□ -1.01
C9orf3-202ENST00000297979 Q6ZSA8 131 aa8.73□□□□□ -1.01
C9orf3-202ENST00000297979 CIRBP-AS1Q8TBR5 109 aa8.73□□□□□ -1.01
C9orf3-202ENST00000297979 DNAH5Q8TE73 4624 aa8.73□□□□□ -1.01
C9orf3-202ENST00000297979 ATP11AUNQ6ZP68 121 aa8.72□□□□□ -1.01
C9orf3-202ENST00000297979 SACSQ9NZJ4 4579 aa8.72□□□□□ -1.01
C9orf3-202ENST00000297979 ATP5EP2Q5VTU8 51 aa8.72□□□□□ -1.01
C9orf3-202ENST00000297979 DNAH8Q96JB1 4490 aa8.72□□□□□ -1.01
C9orf3-202ENST00000297979 IGLV8-61A0A075B6I0 122 aa8.7□□□□□ -1.02
C9orf3-202ENST00000297979 A0A1W2PNM2 257 aa8.7□□□□□ -1.02
C9orf3-202ENST00000297979 SCXQ7RTU7 201 aa8.7□□□□□ -1.02
C9orf3-202ENST00000297979 PKD1P98161 4303 aa8.7□□□□□ -1.02
C9orf3-202ENST00000297979 Q8NBF4 154 aa8.7□□□□□ -1.02
C9orf3-202ENST00000297979 TRAV22A0A0B4J277 110 aa8.69□□□□□ -1.02
C9orf3-202ENST00000297979 ZNF861PO60384 105 aa8.69□□□□□ -1.02
C9orf3-202ENST00000297979 A0A1B0GW54 56 aa8.68□□□□□ -1.02
C9orf3-202ENST00000297979 IGFL1Q6UW32 110 aa8.68□□□□□ -1.02
C9orf3-202ENST00000297979 SPRR4Q96PI1 79 aa8.67□□□□□ -1.02
C9orf3-202ENST00000297979 HAMPP81172 84 aa8.66□□□□□ -1.02
C9orf3-202ENST00000297979 IGLV7-43P04211 117 aa8.66□□□□□ -1.02
C9orf3-202ENST00000297979 Q75L30 129 aa8.66□□□□□ -1.02
C9orf3-202ENST00000297979 LINC00483Q53H64 154 aa8.65□□□□□ -1.03
C9orf3-202ENST00000297979 A0A0G2JQZ4 141 aa8.64□□□□□ -1.03
C9orf3-202ENST00000297979 HCG22E2RYF7 251 aa8.64□□□□□ -1.03
C9orf3-202ENST00000297979 NREPQ16612 68 aa8.64□□□□□ -1.03
C9orf3-202ENST00000297979 CXCL6P80162 114 aa8.63□□□□□ -1.03
C9orf3-202ENST00000297979 SRRM2Q9UQ35 2752 aaKnown RBP8.62□□□□□ -1.03
C9orf3-202ENST00000297979 hDV103S1A0JD37 113 aa8.61□□□□□ -1.03
C9orf3-202ENST00000297979 Q5VV11 94 aa8.59□□□□□ -1.03
C9orf3-202ENST00000297979 IGHV6-1A0A0B4J1U7 121 aa8.59□□□□□ -1.03
C9orf3-202ENST00000297979 IGLV9-49A0A0B4J1Y8 123 aa8.58□□□□□ -1.04
C9orf3-202ENST00000297979 A0A1B0GVY2 172 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms