RNA–Protein interactions for RNA: ENST00000296325.9

LRPAP1-201, Transcript of LDL receptor related protein associated protein 1, humanhuman

TSL 1 (best)

Gene LRPAP1, Length 1,078 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-201ENST00000296325 YPEL4Q96NS1 127 aa8.53□□□□□ -1.04
LRPAP1-201ENST00000296325 A4D1N5 150 aa8.52□□□□□ -1.05
LRPAP1-201ENST00000296325 LEPROTL1O95214 131 aa8.52□□□□□ -1.05
LRPAP1-201ENST00000296325 NOTCH2NLQ7Z3S9 236 aa8.51□□□□□ -1.05
LRPAP1-201ENST00000296325 NHP2Q9NX24 153 aaKnown RBP8.51□□□□□ -1.05
LRPAP1-201ENST00000296325 NDUFA5Q16718 116 aa8.5□□□□□ -1.05
LRPAP1-201ENST00000296325 LINC00310P59036 64 aa8.48□□□□□ -1.05
LRPAP1-201ENST00000296325 Q8N9P0 234 aaPredicted RBP8.48□□□□□ -1.05
LRPAP1-201ENST00000296325 MDN1Q9NU22 5596 aa8.46□□□□□ -1.05
LRPAP1-201ENST00000296325 TRAV13-2A0A0B4J235 113 aa8.46□□□□□ -1.06
LRPAP1-201ENST00000296325 ZNF815PA8K554 130 aa8.46□□□□□ -1.06
LRPAP1-201ENST00000296325 SERF1AO75920 110 aa8.46□□□□□ -1.06
LRPAP1-201ENST00000296325 OCIAD2Q56VL3 154 aa8.46□□□□□ -1.06
LRPAP1-201ENST00000296325 A8MWP4 228 aa8.44□□□□□ -1.06
LRPAP1-201ENST00000296325 KMT2DO14686 5537 aa8.44□□□□□ -1.06
LRPAP1-201ENST00000296325 DSCR10P59022 87 aa8.43□□□□□ -1.06
LRPAP1-201ENST00000296325 HSPB8Q9UJY1 196 aa8.43□□□□□ -1.06
LRPAP1-201ENST00000296325 Q6ZVH6 145 aa8.42□□□□□ -1.06
LRPAP1-201ENST00000296325 A6NDN8 102 aa8.41□□□□□ -1.06
LRPAP1-201ENST00000296325 SLC7A5P1Q8MH63 180 aa8.41□□□□□ -1.06
LRPAP1-201ENST00000296325 FABP4P15090 132 aa8.4□□□□□ -1.06
LRPAP1-201ENST00000296325 KRTAP5-9P26371 169 aa8.4□□□□□ -1.06
LRPAP1-201ENST00000296325 Q6ZQY7 126 aa8.4□□□□□ -1.06
LRPAP1-201ENST00000296325 SMIM11BQ8TCY0 68 aa8.4□□□□□ -1.06
LRPAP1-201ENST00000296325 TTTY13Q9BZ97 58 aa8.39□□□□□ -1.07
LRPAP1-201ENST00000296325 SS18L2Q9UHA2 77 aa8.39□□□□□ -1.07
LRPAP1-201ENST00000296325 TRGC2P03986 189 aa8.38□□□□□ -1.07
LRPAP1-201ENST00000296325 LINC00575Q6W349 94 aa8.38□□□□□ -1.07
LRPAP1-201ENST00000296325 MTURNQ8N3F0 131 aa8.36□□□□□ -1.07
LRPAP1-201ENST00000296325 H3BUT2 72 aa8.33□□□□□ -1.08
LRPAP1-201ENST00000296325 IFITM1P13164 125 aa8.33□□□□□ -1.08
LRPAP1-201ENST00000296325 ANKRD39Q53RE8 183 aa8.33□□□□□ -1.08
LRPAP1-201ENST00000296325 hADV29S1A0JD25 119 aa8.32□□□□□ -1.08
LRPAP1-201ENST00000296325 COLCA2A8K830 154 aa8.31□□□□□ -1.08
LRPAP1-201ENST00000296325 COPS9Q8WXC6 57 aa8.31□□□□□ -1.08
LRPAP1-201ENST00000296325 KRTAP2-3P0C7H8 128 aa8.3□□□□□ -1.08
LRPAP1-201ENST00000296325 LINC00313P59037 77 aa8.3□□□□□ -1.08
LRPAP1-201ENST00000296325 PPDPFLQ8WWR9 84 aa8.3□□□□□ -1.08
LRPAP1-201ENST00000296325 KRTAP2-4Q9BYR9 128 aa8.3□□□□□ -1.08
LRPAP1-201ENST00000296325 SCGB1D1O95968 90 aa8.29□□□□□ -1.08
LRPAP1-201ENST00000296325 A0A087WSZ3 146 aa8.27□□□□□ -1.09
LRPAP1-201ENST00000296325 A6NN06 94 aa8.27□□□□□ -1.09
LRPAP1-201ENST00000296325 VAMP3Q15836 100 aa8.27□□□□□ -1.09
LRPAP1-201ENST00000296325 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.27□□□□□ -1.09
LRPAP1-201ENST00000296325 TEN1Q86WV5 123 aa8.27□□□□□ -1.09
LRPAP1-201ENST00000296325 MUSTN1Q8IVN3 82 aa8.27□□□□□ -1.09
LRPAP1-201ENST00000296325 SYS1-DBNDD2H3BUS1 97 aa8.26□□□□□ -1.09
LRPAP1-201ENST00000296325 SCGB1D4Q6XE38 83 aa8.25□□□□□ -1.09
LRPAP1-201ENST00000296325 LINC01545Q5VT33 79 aa8.24□□□□□ -1.09
LRPAP1-201ENST00000296325 SNHG12Q9BXW3 62 aa8.24□□□□□ -1.09
LRPAP1-201ENST00000296325 SIGMAR1Q99720 223 aa8.23□□□□□ -1.09
LRPAP1-201ENST00000296325 HIST1H2BKO60814 126 aa8.19□□□□□ -1.1
LRPAP1-201ENST00000296325 HIST1H2BJP06899 126 aa8.19□□□□□ -1.1
LRPAP1-201ENST00000296325 HIST1H2BOP23527 126 aa8.19□□□□□ -1.1
LRPAP1-201ENST00000296325 HIST1H2BBP33778 126 aa8.19□□□□□ -1.1
LRPAP1-201ENST00000296325 SPINK7P58062 85 aa8.19□□□□□ -1.1
LRPAP1-201ENST00000296325 HIST1H2BDP58876 126 aa8.19□□□□□ -1.1
LRPAP1-201ENST00000296325 HIST1H2BCP62807 126 aa8.19□□□□□ -1.1
LRPAP1-201ENST00000296325 HIST2H2BEQ16778 126 aa8.19□□□□□ -1.1
LRPAP1-201ENST00000296325 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.19□□□□□ -1.1
LRPAP1-201ENST00000296325 HIST1H2BHQ93079 126 aa8.19□□□□□ -1.1
LRPAP1-201ENST00000296325 HIST1H2BNQ99877 126 aa8.19□□□□□ -1.1
LRPAP1-201ENST00000296325 HIST1H2BMQ99879 126 aa8.19□□□□□ -1.1
LRPAP1-201ENST00000296325 MT1BP07438 61 aa8.15□□□□□ -1.1
LRPAP1-201ENST00000296325 IGKV4-1P06312 121 aa8.14□□□□□ -1.11
LRPAP1-201ENST00000296325 PET117Q6UWS5 81 aa8.14□□□□□ -1.11
LRPAP1-201ENST00000296325 ZCCHC13Q8WW36 166 aaKnown RBP8.12□□□□□ -1.11
LRPAP1-201ENST00000296325 A0A1W2PNM2 257 aa8.1□□□□□ -1.11
LRPAP1-201ENST00000296325 GHRHP01286 108 aa8.1□□□□□ -1.11
LRPAP1-201ENST00000296325 KRTAP10-5P60370 271 aa8.1□□□□□ -1.11
LRPAP1-201ENST00000296325 WFDC13Q8IUB5 93 aa8.1□□□□□ -1.11
LRPAP1-201ENST00000296325 NDUFV3P56181 108 aaKnown RBP8.09□□□□□ -1.11
LRPAP1-201ENST00000296325 FAM218AQ96MZ4 157 aa8.09□□□□□ -1.11
LRPAP1-201ENST00000296325 C3orf79P0CE67 100 aa8.08□□□□□ -1.12
LRPAP1-201ENST00000296325 S100A1P23297 94 aa8.08□□□□□ -1.12
LRPAP1-201ENST00000296325 BVES-AS1Q5T3Y7 98 aa8.07□□□□□ -1.12
LRPAP1-201ENST00000296325 IGHV6-1A0A0B4J1U7 121 aa8.06□□□□□ -1.12
LRPAP1-201ENST00000296325 COA6Q5JTJ3 125 aaKnown RBP8.06□□□□□ -1.12
LRPAP1-201ENST00000296325 LINC00472Q9H8W2 130 aa8.05□□□□□ -1.12
LRPAP1-201ENST00000296325 KRTDAPP60985 99 aa8.04□□□□□ -1.12
LRPAP1-201ENST00000296325 C12orf57Q99622 126 aa8.03□□□□□ -1.12
LRPAP1-201ENST00000296325 H3BMG7 143 aa8.02□□□□□ -1.13
LRPAP1-201ENST00000296325 DEFB116Q30KQ4 102 aa8.02□□□□□ -1.13
LRPAP1-201ENST00000296325 KRTAP19-8Q3LI54 63 aa8.01□□□□□ -1.13
LRPAP1-201ENST00000296325 Q5VV11 94 aa8□□□□□ -1.13
LRPAP1-201ENST00000296325 KRTAP2-2Q9BYT5 123 aa8□□□□□ -1.13
LRPAP1-201ENST00000296325 KRTAP2-1Q9BYU5 128 aa8□□□□□ -1.13
LRPAP1-201ENST00000296325 C8orf87E5RJ46 101 aa7.99□□□□□ -1.13
LRPAP1-201ENST00000296325 ATOH7Q8N100 152 aa7.99□□□□□ -1.13
LRPAP1-201ENST00000296325 TRBV7-4A0A0J9YYF1 115 aa7.98□□□□□ -1.13
LRPAP1-201ENST00000296325 H1FX-AS1Q4G0G2 97 aa7.98□□□□□ -1.13
LRPAP1-201ENST00000296325 RAB37Q96AX2 223 aa7.98□□□□□ -1.13
LRPAP1-201ENST00000296325 A0A1B0GVX0 72 aa7.95□□□□□ -1.14
LRPAP1-201ENST00000296325 SPRR2EP22531 72 aa7.93□□□□□ -1.14
LRPAP1-201ENST00000296325 SPRR2BP35325 72 aa7.93□□□□□ -1.14
LRPAP1-201ENST00000296325 SPRR2AP35326 72 aa7.93□□□□□ -1.14
LRPAP1-201ENST00000296325 SPRR2GQ9BYE4 73 aa7.92□□□□□ -1.14
LRPAP1-201ENST00000296325 HIST3H2BBQ8N257 126 aa7.91□□□□□ -1.14
LRPAP1-201ENST00000296325 HIST1H2BLQ99880 126 aa7.89□□□□□ -1.15
LRPAP1-201ENST00000296325 SPRR2FQ96RM1 72 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms