RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.65□□□□□ -0.54
PDLIM3-201ENST00000284767 RPL37AP8A6NKH3 93 aa11.65□□□□□ -0.55
PDLIM3-201ENST00000284767 FAM229BQ4G0N7 80 aa11.64□□□□□ -0.55
PDLIM3-201ENST00000284767 FAM30AQ9NZY2 134 aa11.64□□□□□ -0.55
PDLIM3-201ENST00000284767 TGP01266 2768 aa11.63□□□□□ -0.55
PDLIM3-201ENST00000284767 VPS13DQ5THJ4 4388 aa11.63□□□□□ -0.55
PDLIM3-201ENST00000284767 NBDYA0A0U1RRE5 68 aa11.61□□□□□ -0.55
PDLIM3-201ENST00000284767 ST20-AS1Q8NBB2 130 aa11.61□□□□□ -0.55
PDLIM3-201ENST00000284767 KMT2AQ03164 3969 aa11.6□□□□□ -0.55
PDLIM3-201ENST00000284767 DSCR10P59022 87 aa11.59□□□□□ -0.55
PDLIM3-201ENST00000284767 IGKV2-24A0A0C4DH68 120 aa11.59□□□□□ -0.55
PDLIM3-201ENST00000284767 A0A096LNI7 61 aa11.57□□□□□ -0.56
PDLIM3-201ENST00000284767 MRPL55Q7Z7F7 128 aaKnown RBP11.56□□□□□ -0.56
PDLIM3-201ENST00000284767 MPLKIPQ8TAP9 179 aa11.56□□□□□ -0.56
PDLIM3-201ENST00000284767 ZCCHC13Q8WW36 166 aaKnown RBP11.56□□□□□ -0.56
PDLIM3-201ENST00000284767 K7EQZ3 153 aa11.55□□□□□ -0.56
PDLIM3-201ENST00000284767 UBE2BP63146 152 aa11.54□□□□□ -0.56
PDLIM3-201ENST00000284767 CNBPP62633 177 aaKnown RBP11.54□□□□□ -0.56
PDLIM3-201ENST00000284767 Q6ZRN7 208 aaPredicted RBP11.54□□□□□ -0.56
PDLIM3-201ENST00000284767 hDV103S1A0JD37 113 aa11.53□□□□□ -0.56
PDLIM3-201ENST00000284767 LRCOL1A6NCL2 159 aa11.53□□□□□ -0.56
PDLIM3-201ENST00000284767 CHTF8P0CG12 524 aa11.53□□□□□ -0.56
PDLIM3-201ENST00000284767 BRK1Q8WUW1 75 aa11.52□□□□□ -0.56
PDLIM3-201ENST00000284767 DNAH2Q9P225 4427 aa11.52□□□□□ -0.57
PDLIM3-201ENST00000284767 A0A1W2PNN7 141 aa11.51□□□□□ -0.57
PDLIM3-201ENST00000284767 HCG22E2RYF7 251 aa11.51□□□□□ -0.57
PDLIM3-201ENST00000284767 REG3GQ6UW15 175 aa11.5□□□□□ -0.57
PDLIM3-201ENST00000284767 LINC00476Q8WZB0 136 aa11.5□□□□□ -0.57
PDLIM3-201ENST00000284767 C16orf90A8MZG2 172 aa11.49□□□□□ -0.57
PDLIM3-201ENST00000284767 C14orf177Q52M58 125 aa11.46□□□□□ -0.58
PDLIM3-201ENST00000284767 C1orf64Q8NEQ6 169 aa11.46□□□□□ -0.58
PDLIM3-201ENST00000284767 IGFL1Q6UW32 110 aa11.44□□□□□ -0.58
PDLIM3-201ENST00000284767 CYP4F30PQ9H0H9 118 aa11.44□□□□□ -0.58
PDLIM3-201ENST00000284767 PANO1I0J062 215 aa11.43□□□□□ -0.58
PDLIM3-201ENST00000284767 Q1T7F1 81 aa11.43□□□□□ -0.58
PDLIM3-201ENST00000284767 C9orf163Q8N9P6 203 aa11.43□□□□□ -0.58
PDLIM3-201ENST00000284767 IGLV8-61A0A075B6I0 122 aa11.42□□□□□ -0.58
PDLIM3-201ENST00000284767 NDUFB1O75438 58 aa11.42□□□□□ -0.58
PDLIM3-201ENST00000284767 PKIGQ9Y2B9 76 aa11.42□□□□□ -0.58
PDLIM3-201ENST00000284767 KRTAP11-1Q8IUC1 163 aa11.41□□□□□ -0.58
PDLIM3-201ENST00000284767 PHF5AQ7RTV0 110 aaKnown RBP11.4□□□□□ -0.58
PDLIM3-201ENST00000284767 HECTD4Q9Y4D8 3996 aa11.38□□□□□ -0.59
PDLIM3-201ENST00000284767 Q6ZR54 194 aa11.38□□□□□ -0.59
PDLIM3-201ENST00000284767 SRRM2Q9UQ35 2752 aaKnown RBP11.38□□□□□ -0.59
PDLIM3-201ENST00000284767 A0A087WTM6 91 aa11.37□□□□□ -0.59
PDLIM3-201ENST00000284767 LY6G6CO95867 125 aa11.37□□□□□ -0.59
PDLIM3-201ENST00000284767 A0A0G2JQZ4 141 aa11.37□□□□□ -0.59
PDLIM3-201ENST00000284767 MP68P56378 58 aa11.37□□□□□ -0.59
PDLIM3-201ENST00000284767 PRLHP81277 87 aa11.36□□□□□ -0.59
PDLIM3-201ENST00000284767 A0A087WSZ3 146 aa11.36□□□□□ -0.59
PDLIM3-201ENST00000284767 KRTAP21-3Q3LHN1 58 aa11.35□□□□□ -0.59
PDLIM3-201ENST00000284767 WFDC13Q8IUB5 93 aa11.35□□□□□ -0.59
PDLIM3-201ENST00000284767 DEFB116Q30KQ4 102 aa11.34□□□□□ -0.59
PDLIM3-201ENST00000284767 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.33□□□□□ -0.6
PDLIM3-201ENST00000284767 TRAV22A0A0B4J277 110 aa11.32□□□□□ -0.6
PDLIM3-201ENST00000284767 KRTAP29-1A8MX34 341 aaPredicted RBP11.32□□□□□ -0.6
PDLIM3-201ENST00000284767 C1orf195Q5TG92 126 aa11.31□□□□□ -0.6
PDLIM3-201ENST00000284767 DNAH17Q9UFH2 4485 aa11.31□□□□□ -0.6
PDLIM3-201ENST00000284767 HYDINQ4G0P3 5121 aa11.3□□□□□ -0.6
PDLIM3-201ENST00000284767 UBE2AP49459 152 aa11.3□□□□□ -0.6
PDLIM3-201ENST00000284767 H3BPC8 53 aa11.29□□□□□ -0.6
PDLIM3-201ENST00000284767 PRR4Q16378 134 aa11.29□□□□□ -0.6
PDLIM3-201ENST00000284767 PRR15Q8IV56 129 aa11.28□□□□□ -0.6
PDLIM3-201ENST00000284767 RTL8CO15255 209 aa11.27□□□□□ -0.6
PDLIM3-201ENST00000284767 RPL37AP61513 92 aaKnown RBP11.27□□□□□ -0.6
PDLIM3-201ENST00000284767 C1orf134Q5TEV5 83 aa11.27□□□□□ -0.6
PDLIM3-201ENST00000284767 LINC00208Q96KT6 92 aa11.27□□□□□ -0.6
PDLIM3-201ENST00000284767 SPRR1BP22528 89 aa11.26□□□□□ -0.61
PDLIM3-201ENST00000284767 SPANXA2-OT1Q8N9U9 137 aa11.26□□□□□ -0.61
PDLIM3-201ENST00000284767 V9GYY9 64 aa11.26□□□□□ -0.61
PDLIM3-201ENST00000284767 CASC2Q6XLA1 102 aa11.26□□□□□ -0.61
PDLIM3-201ENST00000284767 WWC2-AS2Q96NR7 200 aa11.25□□□□□ -0.61
PDLIM3-201ENST00000284767 H0Y9J4 135 aa11.24□□□□□ -0.61
PDLIM3-201ENST00000284767 SPACA4Q8TDM5 124 aa11.24□□□□□ -0.61
PDLIM3-201ENST00000284767 H0Y9P7 68 aa11.24□□□□□ -0.61
PDLIM3-201ENST00000284767 A8MWP4 228 aa11.23□□□□□ -0.61
PDLIM3-201ENST00000284767 DNAH6Q9C0G6 4158 aa11.23□□□□□ -0.61
PDLIM3-201ENST00000284767 PSPHP1O15172 72 aa11.22□□□□□ -0.61
PDLIM3-201ENST00000284767 LINC00472Q9H8W2 130 aa11.22□□□□□ -0.61
PDLIM3-201ENST00000284767 DNAH8Q96JB1 4490 aa11.21□□□□□ -0.62
PDLIM3-201ENST00000284767 FRAS1Q86XX4 4008 aa11.19□□□□□ -0.62
PDLIM3-201ENST00000284767 IGLV5-52A0A0A0MRZ9 124 aa11.19□□□□□ -0.62
PDLIM3-201ENST00000284767 DNAH5Q8TE73 4624 aa11.16□□□□□ -0.62
PDLIM3-201ENST00000284767 DNAH11Q96DT5 4516 aa11.16□□□□□ -0.62
PDLIM3-201ENST00000284767 ALMS1Q8TCU4 4167 aa11.15□□□□□ -0.62
PDLIM3-201ENST00000284767 A8MUN3 132 aa11.14□□□□□ -0.63
PDLIM3-201ENST00000284767 KRTAP10-2P60368 255 aa11.13□□□□□ -0.63
PDLIM3-201ENST00000284767 FAT2Q9NYQ8 4349 aa11.11□□□□□ -0.63
PDLIM3-201ENST00000284767 MMP24-AS1A0A0U1RRL7 71 aa11.11□□□□□ -0.63
PDLIM3-201ENST00000284767 LIMD2Q9BT23 127 aa11.1□□□□□ -0.63
PDLIM3-201ENST00000284767 Q5VV11 94 aa11.1□□□□□ -0.63
PDLIM3-201ENST00000284767 KRTAP13-1Q8IUC0 172 aa11.1□□□□□ -0.63
PDLIM3-201ENST00000284767 Q8N9P0 234 aaPredicted RBP11.09□□□□□ -0.63
PDLIM3-201ENST00000284767 PSORS1C2Q9UIG4 136 aa11.07□□□□□ -0.64
PDLIM3-201ENST00000284767 PKD1P98161 4303 aa11.07□□□□□ -0.64
PDLIM3-201ENST00000284767 PLAC8Q9NZF1 115 aa11.07□□□□□ -0.64
PDLIM3-201ENST00000284767 IGLV7-46A0A075B6I9 117 aa11.04□□□□□ -0.64
PDLIM3-201ENST00000284767 PMAIP1Q13794 54 aa11.04□□□□□ -0.64
PDLIM3-201ENST00000284767 TP53AIP1Q9HCN2 124 aa11.03□□□□□ -0.64
PDLIM3-201ENST00000284767 SACSQ9NZJ4 4579 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms