RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 IGKV2-24A0A0C4DH68 120 aa15.71■□□□□ 0.11
ROM1-201ENST00000278833 SPRR1BP22528 89 aa15.7■□□□□ 0.1
ROM1-201ENST00000278833 SERP1Q9Y6X1 66 aa15.7■□□□□ 0.1
ROM1-201ENST00000278833 DSCR10P59022 87 aa15.69■□□□□ 0.1
ROM1-201ENST00000278833 IGFL1Q6UW32 110 aa15.69■□□□□ 0.1
ROM1-201ENST00000278833 C9orf163Q8N9P6 203 aa15.68■□□□□ 0.1
ROM1-201ENST00000278833 A0A0U1RQV1 116 aa15.67■□□□□ 0.1
ROM1-201ENST00000278833 NUPR2A6NF83 97 aa15.67■□□□□ 0.1
ROM1-201ENST00000278833 PRLHP81277 87 aa15.67■□□□□ 0.1
ROM1-201ENST00000278833 LCE6AA0A183 80 aa15.67■□□□□ 0.1
ROM1-201ENST00000278833 LRCOL1A6NCL2 159 aa15.67■□□□□ 0.1
ROM1-201ENST00000278833 PLECQ15149 4684 aaKnown RBP15.66■□□□□ 0.1
ROM1-201ENST00000278833 LINC00474Q9P2X8 69 aa15.63■□□□□ 0.09
ROM1-201ENST00000278833 LYSTQ99698 3801 aa15.62■□□□□ 0.09
ROM1-201ENST00000278833 NBDYA0A0U1RRE5 68 aa15.62■□□□□ 0.09
ROM1-201ENST00000278833 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.61■□□□□ 0.09
ROM1-201ENST00000278833 DNAH10Q8IVF4 4471 aa15.6■□□□□ 0.09
ROM1-201ENST00000278833 Q6ZRN7 208 aaPredicted RBP15.6■□□□□ 0.09
ROM1-201ENST00000278833 PHF5AQ7RTV0 110 aaKnown RBP15.6■□□□□ 0.09
ROM1-201ENST00000278833 HIGD2AQ9BW72 106 aa15.6■□□□□ 0.09
ROM1-201ENST00000278833 KRTAP11-1Q8IUC1 163 aa15.58■□□□□ 0.08
ROM1-201ENST00000278833 K7EQZ3 153 aa15.57■□□□□ 0.08
ROM1-201ENST00000278833 CHTF8P0CG12 524 aa15.57■□□□□ 0.08
ROM1-201ENST00000278833 UBE2AP49459 152 aa15.57■□□□□ 0.08
ROM1-201ENST00000278833 Q5XG85 94 aa15.54■□□□□ 0.08
ROM1-201ENST00000278833 HCG22E2RYF7 251 aa15.52■□□□□ 0.07
ROM1-201ENST00000278833 KRTAP13-1Q8IUC0 172 aa15.52■□□□□ 0.07
ROM1-201ENST00000278833 KMT2CQ8NEZ4 4911 aaKnown RBP15.52■□□□□ 0.07
ROM1-201ENST00000278833 A0A087WSZ3 146 aa15.48■□□□□ 0.07
ROM1-201ENST00000278833 FAM30AQ9NZY2 134 aa15.48■□□□□ 0.07
ROM1-201ENST00000278833 A0A0G2JQZ4 141 aa15.46■□□□□ 0.06
ROM1-201ENST00000278833 ZCCHC13Q8WW36 166 aaKnown RBP15.46■□□□□ 0.06
ROM1-201ENST00000278833 C5orf47Q569G3 176 aa15.43■□□□□ 0.06
ROM1-201ENST00000278833 SPACA4Q8TDM5 124 aa15.43■□□□□ 0.06
ROM1-201ENST00000278833 SACSQ9NZJ4 4579 aa15.42■□□□□ 0.06
ROM1-201ENST00000278833 SMIM26A0A096LP01 95 aa15.42■□□□□ 0.06
ROM1-201ENST00000278833 ALMS1Q8TCU4 4167 aa15.4■□□□□ 0.06
ROM1-201ENST00000278833 KMT2AQ03164 3969 aa15.39■□□□□ 0.05
ROM1-201ENST00000278833 VPS13DQ5THJ4 4388 aa15.39■□□□□ 0.05
ROM1-201ENST00000278833 PANO1I0J062 215 aa15.39■□□□□ 0.05
ROM1-201ENST00000278833 LY6G6CO95867 125 aa15.39■□□□□ 0.05
ROM1-201ENST00000278833 KRTAP29-1A8MX34 341 aaPredicted RBP15.37■□□□□ 0.05
ROM1-201ENST00000278833 LINC00472Q9H8W2 130 aa15.37■□□□□ 0.05
ROM1-201ENST00000278833 HYDINQ4G0P3 5121 aa15.34■□□□□ 0.05
ROM1-201ENST00000278833 RPL37AP61513 92 aaKnown RBP15.33■□□□□ 0.05
ROM1-201ENST00000278833 C4orf26Q17RF5 130 aa15.33■□□□□ 0.05
ROM1-201ENST00000278833 A0A087WTM6 91 aa15.33■□□□□ 0.04
ROM1-201ENST00000278833 A8MWP4 228 aa15.33■□□□□ 0.04
ROM1-201ENST00000278833 PRR15Q8IV56 129 aa15.33■□□□□ 0.04
ROM1-201ENST00000278833 LINC00483Q53H64 154 aa15.32■□□□□ 0.04
ROM1-201ENST00000278833 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.31■□□□□ 0.04
ROM1-201ENST00000278833 DEFB116Q30KQ4 102 aa15.29■□□□□ 0.04
ROM1-201ENST00000278833 FP248Q71RG6 208 aaPredicted RBP15.29■□□□□ 0.04
ROM1-201ENST00000278833 Q6ZR54 194 aa15.25■□□□□ 0.03
ROM1-201ENST00000278833 RYR2Q92736 4967 aa15.25■□□□□ 0.03
ROM1-201ENST00000278833 RYR3Q15413 4870 aa15.25■□□□□ 0.03
ROM1-201ENST00000278833 WFDC13Q8IUB5 93 aa15.25■□□□□ 0.03
ROM1-201ENST00000278833 ZNF706Q9Y5V0 76 aaPredicted RBP15.24■□□□□ 0.03
ROM1-201ENST00000278833 H3BPC8 53 aa15.23■□□□□ 0.03
ROM1-201ENST00000278833 HRCT1Q6UXD1 115 aa15.23■□□□□ 0.03
ROM1-201ENST00000278833 CASC2Q6XLA1 102 aa15.23■□□□□ 0.03
ROM1-201ENST00000278833 NDUFB1O75438 58 aa15.22■□□□□ 0.03
ROM1-201ENST00000278833 MP68P56378 58 aa15.2■□□□□ 0.02
ROM1-201ENST00000278833 PLAC8Q9NZF1 115 aa15.2■□□□□ 0.02
ROM1-201ENST00000278833 DNAH6Q9C0G6 4158 aa15.2■□□□□ 0.02
ROM1-201ENST00000278833 RTL8CO15255 209 aa15.2■□□□□ 0.02
ROM1-201ENST00000278833 CYP4F30PQ9H0H9 118 aa15.2■□□□□ 0.02
ROM1-201ENST00000278833 IGLV5-52A0A0A0MRZ9 124 aa15.18■□□□□ 0.02
ROM1-201ENST00000278833 hDV103S1A0JD37 113 aa15.15■□□□□ 0.02
ROM1-201ENST00000278833 Q96NJ1 140 aa15.14■□□□□ 0.01
ROM1-201ENST00000278833 DNAH17Q9UFH2 4485 aa15.14■□□□□ 0.01
ROM1-201ENST00000278833 MMP24-AS1A0A0U1RRL7 71 aa15.14■□□□□ 0.01
ROM1-201ENST00000278833 TRAV22A0A0B4J277 110 aa15.13■□□□□ 0.01
ROM1-201ENST00000278833 ASB16-AS1Q495Z4 193 aa15.12■□□□□ 0.01
ROM1-201ENST00000278833 FAM229BQ4G0N7 80 aa15.12■□□□□ 0.01
ROM1-201ENST00000278833 PSORS1C2Q9UIG4 136 aa15.12■□□□□ 0.01
ROM1-201ENST00000278833 DNAH2Q9P225 4427 aa15.1■□□□□ 0.01
ROM1-201ENST00000278833 ZNF861PO60384 105 aa15.08■□□□□ 0.01
ROM1-201ENST00000278833 IGLV9-49A0A0B4J1Y8 123 aa15.08■□□□□ 0
ROM1-201ENST00000278833 H0Y9P7 68 aa15.08■□□□□ 0
ROM1-201ENST00000278833 MOBPQ13875 183 aa15.07■□□□□ 0
ROM1-201ENST00000278833 SPANXA2-OT1Q8N9U9 137 aa15.06■□□□□ 0
ROM1-201ENST00000278833 C1orf64Q8NEQ6 169 aa15.04■□□□□ -0
ROM1-201ENST00000278833 HECTD4Q9Y4D8 3996 aa15.04■□□□□ -0
ROM1-201ENST00000278833 LINC00208Q96KT6 92 aa15.03■□□□□ -0
ROM1-201ENST00000278833 FRAS1Q86XX4 4008 aa15.01□□□□□ -0.01
ROM1-201ENST00000278833 C1orf134Q5TEV5 83 aa15□□□□□ -0.01
ROM1-201ENST00000278833 TP53AIP1Q9HCN2 124 aa14.99□□□□□ -0.01
ROM1-201ENST00000278833 C8orf17Q9NRJ1 99 aa14.96□□□□□ -0.01
ROM1-201ENST00000278833 SRRM2Q9UQ35 2752 aaKnown RBP14.93□□□□□ -0.02
ROM1-201ENST00000278833 A0A1B0GVX0 72 aa14.93□□□□□ -0.02
ROM1-201ENST00000278833 FAT2Q9NYQ8 4349 aa14.92□□□□□ -0.02
ROM1-201ENST00000278833 Q1T7F1 81 aa14.92□□□□□ -0.02
ROM1-201ENST00000278833 LINC00336Q6ZUF6 198 aa14.92□□□□□ -0.02
ROM1-201ENST00000278833 DNAH8Q96JB1 4490 aa14.92□□□□□ -0.02
ROM1-201ENST00000278833 IGLV7-43P04211 117 aa14.91□□□□□ -0.02
ROM1-201ENST00000278833 MPLKIPQ8TAP9 179 aa14.88□□□□□ -0.03
ROM1-201ENST00000278833 PRO0628Q9UI54 55 aa14.88□□□□□ -0.03
ROM1-201ENST00000278833 CD164Q04900 197 aa14.87□□□□□ -0.03
ROM1-201ENST00000278833 CDK2AP2O75956 126 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms