RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 SMIM26A0A096LP01 95 aa7.31□□□□□ -1.24
SSRP1-201ENST00000278412 H0YGX0 51 aa7.31□□□□□ -1.24
SSRP1-201ENST00000278412 Q6ZQY7 126 aa7.31□□□□□ -1.24
SSRP1-201ENST00000278412 LINC00528Q8N1L1 170 aa7.31□□□□□ -1.24
SSRP1-201ENST00000278412 C14orf132Q9NPU4 83 aa7.3□□□□□ -1.24
SSRP1-201ENST00000278412 H7BZZ5 65 aa7.29□□□□□ -1.24
SSRP1-201ENST00000278412 UBE2BP63146 152 aa7.29□□□□□ -1.24
SSRP1-201ENST00000278412 FP248Q71RG6 208 aaPredicted RBP7.29□□□□□ -1.24
SSRP1-201ENST00000278412 ST20-AS1Q8NBB2 130 aa7.29□□□□□ -1.24
SSRP1-201ENST00000278412 ATP5EP2Q5VTU8 51 aa7.29□□□□□ -1.24
SSRP1-201ENST00000278412 VPS13BQ7Z7G8 4022 aa7.29□□□□□ -1.24
SSRP1-201ENST00000278412 C20orf197Q8N268 126 aa7.28□□□□□ -1.24
SSRP1-201ENST00000278412 C1orf195Q5TG92 126 aa7.28□□□□□ -1.24
SSRP1-201ENST00000278412 SPRR1AP35321 89 aa7.28□□□□□ -1.24
SSRP1-201ENST00000278412 REG3GQ6UW15 175 aa7.28□□□□□ -1.24
SSRP1-201ENST00000278412 BCE1O60756 84 aa7.27□□□□□ -1.25
SSRP1-201ENST00000278412 DEFB105AQ8NG35 78 aa7.27□□□□□ -1.25
SSRP1-201ENST00000278412 FAT1Q14517 4588 aa7.27□□□□□ -1.25
SSRP1-201ENST00000278412 Q6ZRX8 168 aa7.26□□□□□ -1.25
SSRP1-201ENST00000278412 ETDCA0A1B0GVM5 59 aa7.26□□□□□ -1.25
SSRP1-201ENST00000278412 FAM19A1Q7Z5A9 133 aa7.26□□□□□ -1.25
SSRP1-201ENST00000278412 CIRBP-AS1Q8TBR5 109 aa7.26□□□□□ -1.25
SSRP1-201ENST00000278412 PRYO14603 147 aa7.25□□□□□ -1.25
SSRP1-201ENST00000278412 KLKP1Q107X0 134 aa7.24□□□□□ -1.25
SSRP1-201ENST00000278412 CCKP06307 115 aa7.24□□□□□ -1.25
SSRP1-201ENST00000278412 SCXQ7RTU7 201 aa7.24□□□□□ -1.25
SSRP1-201ENST00000278412 HIGD2AQ9BW72 106 aa7.24□□□□□ -1.25
SSRP1-201ENST00000278412 ORMDL1Q9P0S3 153 aa7.24□□□□□ -1.25
SSRP1-201ENST00000278412 APOBP04114 4563 aaKnown RBP7.24□□□□□ -1.25
SSRP1-201ENST00000278412 TRAV7A0A075B6U4 112 aa7.23□□□□□ -1.25
SSRP1-201ENST00000278412 LINC00474Q9P2X8 69 aa7.23□□□□□ -1.25
SSRP1-201ENST00000278412 EPPK1P58107 5090 aaKnown RBP7.23□□□□□ -1.25
SSRP1-201ENST00000278412 PLAC8Q9NZF1 115 aa7.22□□□□□ -1.25
SSRP1-201ENST00000278412 A0A0G2JQZ4 141 aa7.22□□□□□ -1.25
SSRP1-201ENST00000278412 PSORS1C2Q9UIG4 136 aa7.22□□□□□ -1.25
SSRP1-201ENST00000278412 LINC01547P58512 204 aaPredicted RBP7.21□□□□□ -1.25
SSRP1-201ENST00000278412 BRK1Q8WUW1 75 aa7.21□□□□□ -1.26
SSRP1-201ENST00000278412 A0A1B0GVY2 172 aa7.2□□□□□ -1.26
SSRP1-201ENST00000278412 TRBV7-6A0A0J9YX20 115 aa7.2□□□□□ -1.26
SSRP1-201ENST00000278412 Q8N377 158 aa7.2□□□□□ -1.26
SSRP1-201ENST00000278412 ATP5EP56381 51 aaPredicted RBP7.19□□□□□ -1.26
SSRP1-201ENST00000278412 A0A0U1RQV1 116 aa7.19□□□□□ -1.26
SSRP1-201ENST00000278412 Q6ZSA8 131 aa7.19□□□□□ -1.26
SSRP1-201ENST00000278412 C1orf137Q5JT78 98 aa7.17□□□□□ -1.26
SSRP1-201ENST00000278412 ANAPC11Q9NYG5 84 aa7.17□□□□□ -1.26
SSRP1-201ENST00000278412 LAMTOR3Q9UHA4 124 aa7.17□□□□□ -1.26
SSRP1-201ENST00000278412 NDUFC1O43677 76 aa7.17□□□□□ -1.26
SSRP1-201ENST00000278412 UBE2AP49459 152 aa7.17□□□□□ -1.26
SSRP1-201ENST00000278412 F8WEM9 126 aa7.16□□□□□ -1.26
SSRP1-201ENST00000278412 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.16□□□□□ -1.26
SSRP1-201ENST00000278412 JMJD7-PLA2G4BH0Y9G9 81 aa7.16□□□□□ -1.26
SSRP1-201ENST00000278412 KRTAP13-1Q8IUC0 172 aa7.16□□□□□ -1.26
SSRP1-201ENST00000278412 TMEM256-PLSCR3K7ERE1 68 aa7.15□□□□□ -1.26
SSRP1-201ENST00000278412 SMR3BP02814 79 aaPredicted RBP7.15□□□□□ -1.26
SSRP1-201ENST00000278412 RBM3P98179 157 aaKnown RBP7.15□□□□□ -1.26
SSRP1-201ENST00000278412 KIAA1109Q2LD37 5005 aa7.15□□□□□ -1.27
SSRP1-201ENST00000278412 DHRS4-AS1Q9P1J3 65 aa7.14□□□□□ -1.27
SSRP1-201ENST00000278412 UBL5Q9BZL1 73 aa7.14□□□□□ -1.27
SSRP1-201ENST00000278412 SNURFQ9Y675 71 aa7.14□□□□□ -1.27
SSRP1-201ENST00000278412 SMIM29Q86T20 159 aa7.13□□□□□ -1.27
SSRP1-201ENST00000278412 IGLV5-48A0A075B6I7 105 aa7.1□□□□□ -1.27
SSRP1-201ENST00000278412 HSPG2P98160 4391 aa7.1□□□□□ -1.27
SSRP1-201ENST00000278412 TRBV7-4A0A0J9YYF1 115 aa7.09□□□□□ -1.28
SSRP1-201ENST00000278412 PRR15Q8IV56 129 aa7.09□□□□□ -1.28
SSRP1-201ENST00000278412 PMAIP1Q13794 54 aa7.08□□□□□ -1.28
SSRP1-201ENST00000278412 FAM229BQ4G0N7 80 aa7.08□□□□□ -1.28
SSRP1-201ENST00000278412 IGLV7-43P04211 117 aa7.07□□□□□ -1.28
SSRP1-201ENST00000278412 Q6ZQT0 140 aa7.07□□□□□ -1.28
SSRP1-201ENST00000278412 KRTAP17-1Q9BYP8 105 aa7.07□□□□□ -1.28
SSRP1-201ENST00000278412 H0Y9J4 135 aa7.06□□□□□ -1.28
SSRP1-201ENST00000278412 ZNF861PO60384 105 aa7.06□□□□□ -1.28
SSRP1-201ENST00000278412 MPLKIPQ8TAP9 179 aa7.05□□□□□ -1.28
SSRP1-201ENST00000278412 RYR1P21817 5038 aa7.05□□□□□ -1.28
SSRP1-201ENST00000278412 CXCL6P80162 114 aa7.05□□□□□ -1.28
SSRP1-201ENST00000278412 IGLV9-49A0A0B4J1Y8 123 aa7.04□□□□□ -1.28
SSRP1-201ENST00000278412 LOC110117498A0A087WWA1 95 aa7.04□□□□□ -1.28
SSRP1-201ENST00000278412 SPRR4Q96PI1 79 aa7.04□□□□□ -1.28
SSRP1-201ENST00000278412 FLG2Q5D862 2391 aaPredicted RBP7.03□□□□□ -1.28
SSRP1-201ENST00000278412 A0A1W2PNM2 257 aa7.03□□□□□ -1.28
SSRP1-201ENST00000278412 Q6ZVQ6 151 aa7.03□□□□□ -1.28
SSRP1-201ENST00000278412 TMEM254Q8TBM7 123 aa7.02□□□□□ -1.29
SSRP1-201ENST00000278412 LRP1Q07954 4544 aaKnown RBP7.01□□□□□ -1.29
SSRP1-201ENST00000278412 IGFL1Q6UW32 110 aa7.01□□□□□ -1.29
SSRP1-201ENST00000278412 NREPQ16612 68 aa7□□□□□ -1.29
SSRP1-201ENST00000278412 CD164Q04900 197 aa7□□□□□ -1.29
SSRP1-201ENST00000278412 A0A087X002 238 aa6.98□□□□□ -1.29
SSRP1-201ENST00000278412 MYCBP2O75592 4640 aa6.97□□□□□ -1.29
SSRP1-201ENST00000278412 SPRR1BP22528 89 aa6.97□□□□□ -1.29
SSRP1-201ENST00000278412 MOBPQ13875 183 aa6.97□□□□□ -1.29
SSRP1-201ENST00000278412 KRTAP10-4P60372 401 aaPredicted RBP6.97□□□□□ -1.29
SSRP1-201ENST00000278412 PDE6GP18545 87 aa6.96□□□□□ -1.29
SSRP1-201ENST00000278412 RPL37AP61513 92 aaKnown RBP6.96□□□□□ -1.3
SSRP1-201ENST00000278412 Q1T7F1 81 aa6.96□□□□□ -1.3
SSRP1-201ENST00000278412 LINC00483Q53H64 154 aa6.95□□□□□ -1.3
SSRP1-201ENST00000278412 H3BQ85 93 aa6.95□□□□□ -1.3
SSRP1-201ENST00000278412 BPY2O14599 106 aa6.95□□□□□ -1.3
SSRP1-201ENST00000278412 DEFB116Q30KQ4 102 aa6.95□□□□□ -1.3
SSRP1-201ENST00000278412 KRTAP1-4P0C5Y4 121 aa6.94□□□□□ -1.3
SSRP1-201ENST00000278412 PKHD1L1Q86WI1 4243 aa6.94□□□□□ -1.3
SSRP1-201ENST00000278412 hDV103S1A0JD37 113 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms