RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 ZCCHC13Q8WW36 166 aaKnown RBP5.73□□□□□ -1.49
CTDSPL-201ENST00000273179 HTN3P15516 51 aa5.73□□□□□ -1.49
CTDSPL-201ENST00000273179 FLG2Q5D862 2391 aaPredicted RBP5.73□□□□□ -1.49
CTDSPL-201ENST00000273179 COX6A2Q02221 97 aa5.73□□□□□ -1.49
CTDSPL-201ENST00000273179 IGLV7-46A0A075B6I9 117 aa5.72□□□□□ -1.49
CTDSPL-201ENST00000273179 MTORP42345 2549 aa5.72□□□□□ -1.49
CTDSPL-201ENST00000273179 ITPR2Q14571 2701 aa5.71□□□□□ -1.49
CTDSPL-201ENST00000273179 UBR5O95071 2799 aaPredicted RBP5.71□□□□□ -1.49
CTDSPL-201ENST00000273179 IGLV7-43P04211 117 aa5.71□□□□□ -1.49
CTDSPL-201ENST00000273179 CRIPTQ9P021 101 aa5.71□□□□□ -1.5
CTDSPL-201ENST00000273179 A8MTW9 85 aa5.7□□□□□ -1.5
CTDSPL-201ENST00000273179 C10orf99Q6UWK7 81 aa5.7□□□□□ -1.5
CTDSPL-201ENST00000273179 C9orf163Q8N9P6 203 aa5.7□□□□□ -1.5
CTDSPL-201ENST00000273179 HELZ2Q9BYK8 2649 aaKnown RBP5.7□□□□□ -1.5
CTDSPL-201ENST00000273179 K7EQZ3 153 aa5.7□□□□□ -1.5
CTDSPL-201ENST00000273179 A8MUU9 505 aa5.69□□□□□ -1.5
CTDSPL-201ENST00000273179 C6orf48Q9UBA6 75 aa5.69□□□□□ -1.5
CTDSPL-201ENST00000273179 LINC00959A0A1B0GUT2 108 aa5.69□□□□□ -1.5
CTDSPL-201ENST00000273179 RPL37AP61513 92 aaKnown RBP5.69□□□□□ -1.5
CTDSPL-201ENST00000273179 SPATA8Q6RVD6 105 aa5.69□□□□□ -1.5
CTDSPL-201ENST00000273179 KRTAP10-9P60411 292 aa5.68□□□□□ -1.5
CTDSPL-201ENST00000273179 Q8IZM0 81 aa5.68□□□□□ -1.5
CTDSPL-201ENST00000273179 HECTD1Q9ULT8 2610 aa5.68□□□□□ -1.5
CTDSPL-201ENST00000273179 FLNAP21333 2647 aaKnown RBP5.68□□□□□ -1.5
CTDSPL-201ENST00000273179 HIVEP2P31629 2446 aa5.68□□□□□ -1.5
CTDSPL-201ENST00000273179 C2CD3Q4AC94 2353 aa5.68□□□□□ -1.5
CTDSPL-201ENST00000273179 CNBPP62633 177 aaKnown RBP5.67□□□□□ -1.5
CTDSPL-201ENST00000273179 ITPR3Q14573 2671 aa5.67□□□□□ -1.5
CTDSPL-201ENST00000273179 A0A1B0GVX0 72 aa5.67□□□□□ -1.5
CTDSPL-201ENST00000273179 P0C880 135 aa5.65□□□□□ -1.5
CTDSPL-201ENST00000273179 PRO0255Q9UI72 69 aa5.65□□□□□ -1.5
CTDSPL-201ENST00000273179 ANGP03950 147 aaKnown RBP5.65□□□□□ -1.51
CTDSPL-201ENST00000273179 SPART-AS1P0CW21 52 aa5.64□□□□□ -1.51
CTDSPL-201ENST00000273179 FASNP49327 2511 aaKnown RBP5.63□□□□□ -1.51
CTDSPL-201ENST00000273179 GCN1Q92616 2671 aaKnown RBP5.63□□□□□ -1.51
CTDSPL-201ENST00000273179 FAM104AQ969W3 186 aa5.63□□□□□ -1.51
CTDSPL-201ENST00000273179 PROK1P58294 105 aa5.62□□□□□ -1.51
CTDSPL-201ENST00000273179 LINC00315P59091 139 aa5.62□□□□□ -1.51
CTDSPL-201ENST00000273179 JMJD1CQ15652 2540 aa5.62□□□□□ -1.51
CTDSPL-201ENST00000273179 LINC00612Q8N6U2 182 aa5.62□□□□□ -1.51
CTDSPL-201ENST00000273179 LCE6AA0A183 80 aa5.61□□□□□ -1.51
CTDSPL-201ENST00000273179 ZNF861PO60384 105 aa5.6□□□□□ -1.51
CTDSPL-201ENST00000273179 TP53AIP1Q9HCN2 124 aa5.6□□□□□ -1.51
CTDSPL-201ENST00000273179 A0A096LPF7 62 aa5.59□□□□□ -1.51
CTDSPL-201ENST00000273179 HRES1P13985 223 aa5.59□□□□□ -1.51
CTDSPL-201ENST00000273179 IGKV2D-24A0A075B6R9 120 aa5.59□□□□□ -1.52
CTDSPL-201ENST00000273179 A0A087WSZ3 146 aa5.58□□□□□ -1.52
CTDSPL-201ENST00000273179 CLPSL2Q6UWE3 100 aa5.58□□□□□ -1.52
CTDSPL-201ENST00000273179 DEFB131BA0A096LNP1 70 aa5.58□□□□□ -1.52
CTDSPL-201ENST00000273179 UNC79Q9P2D8 2635 aa5.58□□□□□ -1.52
CTDSPL-201ENST00000273179 DEFB135Q30KP9 77 aa5.58□□□□□ -1.52
CTDSPL-201ENST00000273179 OTOGQ6ZRI0 2925 aa5.56□□□□□ -1.52
CTDSPL-201ENST00000273179 PDZD2O15018 2839 aa5.56□□□□□ -1.52
CTDSPL-201ENST00000273179 LINC00304Q8N9R0 145 aa5.55□□□□□ -1.52
CTDSPL-201ENST00000273179 Q5W150 140 aa5.54□□□□□ -1.52
CTDSPL-201ENST00000273179 SPRR4Q96PI1 79 aa5.54□□□□□ -1.52
CTDSPL-201ENST00000273179 SETXQ7Z333 2677 aaKnown RBP5.54□□□□□ -1.52
CTDSPL-201ENST00000273179 FN1P02751 2386 aaKnown RBP5.54□□□□□ -1.52
CTDSPL-201ENST00000273179 NBEAL2Q6ZNJ1 2754 aa5.54□□□□□ -1.52
CTDSPL-201ENST00000273179 VWFP04275 2813 aa5.53□□□□□ -1.52
CTDSPL-201ENST00000273179 A0A096LNT2 108 aa5.52□□□□□ -1.53
CTDSPL-201ENST00000273179 SPINK1P00995 79 aa5.52□□□□□ -1.53
CTDSPL-201ENST00000273179 Q6ZSN1 163 aa5.52□□□□□ -1.53
CTDSPL-201ENST00000273179 FLNBO75369 2602 aaKnown RBP5.52□□□□□ -1.53
CTDSPL-201ENST00000273179 TRRAPQ9Y4A5 3859 aa5.51□□□□□ -1.53
CTDSPL-201ENST00000273179 LELP1Q5T871 98 aa5.5□□□□□ -1.53
CTDSPL-201ENST00000273179 UBE2DNLQ8IWF7 75 aa5.5□□□□□ -1.53
CTDSPL-201ENST00000273179 DEFB4AO15263 64 aa5.5□□□□□ -1.53
CTDSPL-201ENST00000273179 ANK3Q12955 4377 aaKnown RBP5.5□□□□□ -1.53
CTDSPL-201ENST00000273179 DSCR10P59022 87 aa5.5□□□□□ -1.53
CTDSPL-201ENST00000273179 SMR3AQ99954 134 aa5.5□□□□□ -1.53
CTDSPL-201ENST00000273179 A0A1B0GUV1 79 aa5.49□□□□□ -1.53
CTDSPL-201ENST00000273179 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.49□□□□□ -1.53
CTDSPL-201ENST00000273179 TENM1Q9UKZ4 2725 aa5.49□□□□□ -1.53
CTDSPL-201ENST00000273179 PRLHP81277 87 aa5.48□□□□□ -1.53
CTDSPL-201ENST00000273179 KRTAP4-16G5E9R7 235 aaPredicted RBP5.48□□□□□ -1.53
CTDSPL-201ENST00000273179 PRR34Q9NV39 138 aa5.48□□□□□ -1.53
CTDSPL-201ENST00000273179 PLAC8Q9NZF1 115 aa5.48□□□□□ -1.53
CTDSPL-201ENST00000273179 KRTAP1-3Q8IUG1 177 aa5.47□□□□□ -1.53
CTDSPL-201ENST00000273179 KMT2BQ9UMN6 2715 aaPredicted RBP5.47□□□□□ -1.53
CTDSPL-201ENST00000273179 A0A1W2PNN7 141 aa5.46□□□□□ -1.54
CTDSPL-201ENST00000273179 TEP1Q99973 2627 aaKnown RBP5.45□□□□□ -1.54
CTDSPL-201ENST00000273179 ATRQ13535 2644 aa5.45□□□□□ -1.54
CTDSPL-201ENST00000273179 HIVEP1P15822 2718 aa5.43□□□□□ -1.54
CTDSPL-201ENST00000273179 TYMSOSQ8TAI1 123 aa5.43□□□□□ -1.54
CTDSPL-201ENST00000273179 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
CTDSPL-201ENST00000273179 Q96NJ1 140 aa5.42□□□□□ -1.54
CTDSPL-201ENST00000273179 NBDYA0A0U1RRE5 68 aa5.41□□□□□ -1.54
CTDSPL-201ENST00000273179 IGKV2-24A0A0C4DH68 120 aa5.41□□□□□ -1.54
CTDSPL-201ENST00000273179 IGLV6-57P01721 117 aa5.39□□□□□ -1.55
CTDSPL-201ENST00000273179 NSD1Q96L73 2696 aaPredicted RBP5.39□□□□□ -1.55
CTDSPL-201ENST00000273179 C14orf177Q52M58 125 aa5.38□□□□□ -1.55
CTDSPL-201ENST00000273179 FAM168BA1KXE4 195 aa5.38□□□□□ -1.55
CTDSPL-201ENST00000273179 UNQ6190/PRO20217Q6UXQ8 127 aa5.38□□□□□ -1.55
CTDSPL-201ENST00000273179 LINC00472Q9H8W2 130 aa5.38□□□□□ -1.55
CTDSPL-201ENST00000273179 Q6ZRX8 168 aa5.37□□□□□ -1.55
CTDSPL-201ENST00000273179 A0A087WTM6 91 aa5.37□□□□□ -1.55
CTDSPL-201ENST00000273179 PANO1I0J062 215 aa5.37□□□□□ -1.55
CTDSPL-201ENST00000273179 KRTAP1-1Q07627 177 aa5.37□□□□□ -1.55
CTDSPL-201ENST00000273179 C15orf56Q8N910 161 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms