RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 PANO1I0J062 215 aa9.57□□□□□ -0.88
SF3B4-201ENST00000271628 ERC2-IT1O76042 136 aa9.57□□□□□ -0.88
SF3B4-201ENST00000271628 SCXQ7RTU7 201 aa9.57□□□□□ -0.88
SF3B4-201ENST00000271628 IGLV5-52A0A0A0MRZ9 124 aa9.57□□□□□ -0.88
SF3B4-201ENST00000271628 ST20-AS1Q8NBB2 130 aa9.57□□□□□ -0.88
SF3B4-201ENST00000271628 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.57□□□□□ -0.88
SF3B4-201ENST00000271628 DNAH17Q9UFH2 4485 aa9.56□□□□□ -0.88
SF3B4-201ENST00000271628 PRLHP81277 87 aa9.55□□□□□ -0.88
SF3B4-201ENST00000271628 KRTAP11-1Q8IUC1 163 aa9.54□□□□□ -0.88
SF3B4-201ENST00000271628 H7BZZ5 65 aa9.54□□□□□ -0.88
SF3B4-201ENST00000271628 ALMS1Q8TCU4 4167 aa9.54□□□□□ -0.88
SF3B4-201ENST00000271628 FUSP35637 526 aaKnown RBP eCLIP9.53□□□□□ -0.88
SF3B4-201ENST00000271628 HIGD2AQ9BW72 106 aa9.53□□□□□ -0.88
SF3B4-201ENST00000271628 BPY2O14599 106 aa9.52□□□□□ -0.88
SF3B4-201ENST00000271628 TNP2Q05952 138 aa9.52□□□□□ -0.89
SF3B4-201ENST00000271628 FAM236DA0A1B0GTK5 79 aa9.51□□□□□ -0.89
SF3B4-201ENST00000271628 IGKV4-1P06312 121 aa9.51□□□□□ -0.89
SF3B4-201ENST00000271628 FAM236CP0DP71 79 aa9.51□□□□□ -0.89
SF3B4-201ENST00000271628 UBE2AP49459 152 aa9.51□□□□□ -0.89
SF3B4-201ENST00000271628 NDUFC1O43677 76 aa9.51□□□□□ -0.89
SF3B4-201ENST00000271628 PLAC8Q9NZF1 115 aa9.49□□□□□ -0.89
SF3B4-201ENST00000271628 C1orf137Q5JT78 98 aa9.49□□□□□ -0.89
SF3B4-201ENST00000271628 FRAS1Q86XX4 4008 aa9.49□□□□□ -0.89
SF3B4-201ENST00000271628 F8WEM9 126 aa9.48□□□□□ -0.89
SF3B4-201ENST00000271628 SMIM29Q86T20 159 aa9.47□□□□□ -0.89
SF3B4-201ENST00000271628 Q8N9L7 120 aa9.47□□□□□ -0.89
SF3B4-201ENST00000271628 A0A1W2PNM2 257 aa9.47□□□□□ -0.89
SF3B4-201ENST00000271628 OXTP01178 125 aa9.47□□□□□ -0.89
SF3B4-201ENST00000271628 SNURFQ9Y675 71 aa9.47□□□□□ -0.89
SF3B4-201ENST00000271628 Q8NBF4 154 aa9.46□□□□□ -0.89
SF3B4-201ENST00000271628 SPRR4Q96PI1 79 aa9.46□□□□□ -0.89
SF3B4-201ENST00000271628 KRTAP13-1Q8IUC0 172 aa9.45□□□□□ -0.9
SF3B4-201ENST00000271628 HYDINQ4G0P3 5121 aa9.44□□□□□ -0.9
SF3B4-201ENST00000271628 SPRR1BP22528 89 aa9.44□□□□□ -0.9
SF3B4-201ENST00000271628 OCR1Q9BZK8 76 aa9.44□□□□□ -0.9
SF3B4-201ENST00000271628 SERP1Q9Y6X1 66 aa9.44□□□□□ -0.9
SF3B4-201ENST00000271628 TMEM254Q8TBM7 123 aa9.43□□□□□ -0.9
SF3B4-201ENST00000271628 IGLV8-61A0A075B6I0 122 aa9.41□□□□□ -0.9
SF3B4-201ENST00000271628 ATP5EP56381 51 aaPredicted RBP9.41□□□□□ -0.9
SF3B4-201ENST00000271628 PSORS1C2Q9UIG4 136 aa9.41□□□□□ -0.9
SF3B4-201ENST00000271628 DNAH8Q96JB1 4490 aa9.4□□□□□ -0.9
SF3B4-201ENST00000271628 DNAH11Q96DT5 4516 aa9.4□□□□□ -0.9
SF3B4-201ENST00000271628 KRTAP10-2P60368 255 aa9.4□□□□□ -0.9
SF3B4-201ENST00000271628 DNAH5Q8TE73 4624 aa9.38□□□□□ -0.91
SF3B4-201ENST00000271628 SRRM2Q9UQ35 2752 aaKnown RBP9.37□□□□□ -0.91
SF3B4-201ENST00000271628 C5orf47Q569G3 176 aa9.37□□□□□ -0.91
SF3B4-201ENST00000271628 IGFL1Q6UW32 110 aa9.37□□□□□ -0.91
SF3B4-201ENST00000271628 Q5XG85 94 aa9.36□□□□□ -0.91
SF3B4-201ENST00000271628 A0A0U1RQV1 116 aa9.36□□□□□ -0.91
SF3B4-201ENST00000271628 ZNF706Q9Y5V0 76 aaPredicted RBP9.36□□□□□ -0.91
SF3B4-201ENST00000271628 PKD1P98161 4303 aa9.36□□□□□ -0.91
SF3B4-201ENST00000271628 ZNF861PO60384 105 aa9.35□□□□□ -0.91
SF3B4-201ENST00000271628 FAT2Q9NYQ8 4349 aa9.35□□□□□ -0.91
SF3B4-201ENST00000271628 DSCR10P59022 87 aa9.34□□□□□ -0.91
SF3B4-201ENST00000271628 CIRBP-AS1Q8TBR5 109 aa9.33□□□□□ -0.92
SF3B4-201ENST00000271628 Q6ZSA8 131 aa9.32□□□□□ -0.92
SF3B4-201ENST00000271628 FAM30AQ9NZY2 134 aa9.32□□□□□ -0.92
SF3B4-201ENST00000271628 C4orf26Q17RF5 130 aa9.31□□□□□ -0.92
SF3B4-201ENST00000271628 LINC00483Q53H64 154 aa9.31□□□□□ -0.92
SF3B4-201ENST00000271628 LCE6AA0A183 80 aa9.3□□□□□ -0.92
SF3B4-201ENST00000271628 SACSQ9NZJ4 4579 aa9.3□□□□□ -0.92
SF3B4-201ENST00000271628 SMIM26A0A096LP01 95 aa9.29□□□□□ -0.92
SF3B4-201ENST00000271628 K7EQZ3 153 aa9.29□□□□□ -0.92
SF3B4-201ENST00000271628 IGLV7-43P04211 117 aa9.29□□□□□ -0.92
SF3B4-201ENST00000271628 KRTAP10-1P60331 282 aa9.28□□□□□ -0.92
SF3B4-201ENST00000271628 RPL37AP61513 92 aaKnown RBP9.28□□□□□ -0.92
SF3B4-201ENST00000271628 A0A0G2JQZ4 141 aa9.27□□□□□ -0.93
SF3B4-201ENST00000271628 LINC00336Q6ZUF6 198 aa9.27□□□□□ -0.93
SF3B4-201ENST00000271628 HCG22E2RYF7 251 aa9.25□□□□□ -0.93
SF3B4-201ENST00000271628 A0A087WSZ3 146 aa9.25□□□□□ -0.93
SF3B4-201ENST00000271628 HRCT1Q6UXD1 115 aa9.24□□□□□ -0.93
SF3B4-201ENST00000271628 IGLV9-49A0A0B4J1Y8 123 aa9.24□□□□□ -0.93
SF3B4-201ENST00000271628 FP248Q71RG6 208 aaPredicted RBP9.2□□□□□ -0.94
SF3B4-201ENST00000271628 ZCCHC13Q8WW36 166 aaKnown RBP9.19□□□□□ -0.94
SF3B4-201ENST00000271628 DEFB116Q30KQ4 102 aa9.17□□□□□ -0.94
SF3B4-201ENST00000271628 LRP1BQ9NZR2 4599 aa9.16□□□□□ -0.94
SF3B4-201ENST00000271628 MOBPQ13875 183 aa9.16□□□□□ -0.94
SF3B4-201ENST00000271628 ANAPC11Q9NYG5 84 aa9.15□□□□□ -0.94
SF3B4-201ENST00000271628 NDUFB1O75438 58 aa9.12□□□□□ -0.95
SF3B4-201ENST00000271628 KRTAP29-1A8MX34 341 aaPredicted RBP9.12□□□□□ -0.95
SF3B4-201ENST00000271628 WFDC13Q8IUB5 93 aa9.12□□□□□ -0.95
SF3B4-201ENST00000271628 PRR15Q8IV56 129 aa9.12□□□□□ -0.95
SF3B4-201ENST00000271628 LINC00472Q9H8W2 130 aa9.12□□□□□ -0.95
SF3B4-201ENST00000271628 A8MWP4 228 aa9.11□□□□□ -0.95
SF3B4-201ENST00000271628 MP68P56378 58 aa9.11□□□□□ -0.95
SF3B4-201ENST00000271628 PKHD1P08F94 4074 aa9.11□□□□□ -0.95
SF3B4-201ENST00000271628 FAM229BQ4G0N7 80 aa9.1□□□□□ -0.95
SF3B4-201ENST00000271628 SSBP3-AS1Q7Z2R9 100 aa9.1□□□□□ -0.95
SF3B4-201ENST00000271628 A0A1B0GVY2 172 aa9.09□□□□□ -0.95
SF3B4-201ENST00000271628 CASC2Q6XLA1 102 aa9.09□□□□□ -0.95
SF3B4-201ENST00000271628 RYR2Q92736 4967 aa9.08□□□□□ -0.96
SF3B4-201ENST00000271628 hDV103S1A0JD37 113 aa9.08□□□□□ -0.96
SF3B4-201ENST00000271628 VPS13BQ7Z7G8 4022 aa9.07□□□□□ -0.96
SF3B4-201ENST00000271628 CYP4F30PQ9H0H9 118 aa9.07□□□□□ -0.96
SF3B4-201ENST00000271628 H3BPC8 53 aa9.06□□□□□ -0.96
SF3B4-201ENST00000271628 CD164Q04900 197 aa9.05□□□□□ -0.96
SF3B4-201ENST00000271628 C1orf64Q8NEQ6 169 aa9.04□□□□□ -0.96
SF3B4-201ENST00000271628 KMT2CQ8NEZ4 4911 aaKnown RBP9.04□□□□□ -0.96
SF3B4-201ENST00000271628 TRAV22A0A0B4J277 110 aa9.03□□□□□ -0.96
SF3B4-201ENST00000271628 MPLKIPQ8TAP9 179 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms