RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 COPS9Q8WXC6 57 aa5.33□□□□□ -1.56
VPS41-201ENST00000265745 LIMD2Q9BT23 127 aa5.33□□□□□ -1.56
VPS41-201ENST00000265745 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
VPS41-201ENST00000265745 A6NDN8 102 aa5.32□□□□□ -1.56
VPS41-201ENST00000265745 CD164Q04900 197 aa5.32□□□□□ -1.56
VPS41-201ENST00000265745 Q6ZVH6 145 aa5.32□□□□□ -1.56
VPS41-201ENST00000265745 SMIM29Q86T20 159 aa5.32□□□□□ -1.56
VPS41-201ENST00000265745 PCP2Q8IVA1 136 aa5.32□□□□□ -1.56
VPS41-201ENST00000265745 MUSTN1Q8IVN3 82 aa5.32□□□□□ -1.56
VPS41-201ENST00000265745 ATOH7Q8N100 152 aa5.32□□□□□ -1.56
VPS41-201ENST00000265745 A0A1B0GWB2 263 aa5.31□□□□□ -1.56
VPS41-201ENST00000265745 PRO1933Q9H354 126 aa5.31□□□□□ -1.56
VPS41-201ENST00000265745 IGLV5-48A0A075B6I7 105 aa5.3□□□□□ -1.56
VPS41-201ENST00000265745 AKR1D1P51857 326 aa5.3□□□□□ -1.56
VPS41-201ENST00000265745 Q5XG85 94 aa5.3□□□□□ -1.56
VPS41-201ENST00000265745 H7C2G1 150 aa5.29□□□□□ -1.56
VPS41-201ENST00000265745 LCE3BQ5TA77 95 aa5.29□□□□□ -1.56
VPS41-201ENST00000265745 TRAV13-2A0A0B4J235 113 aa5.28□□□□□ -1.56
VPS41-201ENST00000265745 A0A0G2JQZ4 141 aa5.28□□□□□ -1.56
VPS41-201ENST00000265745 C9orf92A6NGG3 77 aa5.28□□□□□ -1.56
VPS41-201ENST00000265745 SMIM11BQ8TCY0 68 aa5.28□□□□□ -1.56
VPS41-201ENST00000265745 KRTAP9-3Q9BYQ3 159 aa5.28□□□□□ -1.56
VPS41-201ENST00000265745 KRTAP19-2Q3LHN2 52 aa5.27□□□□□ -1.57
VPS41-201ENST00000265745 PCOTHQ58A44 107 aa5.27□□□□□ -1.57
VPS41-201ENST00000265745 C1orf195Q5TG92 126 aa5.27□□□□□ -1.57
VPS41-201ENST00000265745 NHP2Q9NX24 153 aaKnown RBP5.26□□□□□ -1.57
VPS41-201ENST00000265745 IGLV8-61A0A075B6I0 122 aa5.25□□□□□ -1.57
VPS41-201ENST00000265745 VAMP3Q15836 100 aa5.24□□□□□ -1.57
VPS41-201ENST00000265745 HIST1H2BLQ99880 126 aa5.24□□□□□ -1.57
VPS41-201ENST00000265745 LINC00575Q6W349 94 aa5.23□□□□□ -1.57
VPS41-201ENST00000265745 HIST3H2BBQ8N257 126 aa5.23□□□□□ -1.57
VPS41-201ENST00000265745 FSIP2Q5CZC0 6907 aa5.22□□□□□ -1.57
VPS41-201ENST00000265745 HSBP1L1C9JCN9 74 aa5.21□□□□□ -1.58
VPS41-201ENST00000265745 TCL1BO95988 128 aa5.21□□□□□ -1.58
VPS41-201ENST00000265745 S100A2P29034 98 aa5.21□□□□□ -1.58
VPS41-201ENST00000265745 hADV29S1A0JD25 119 aa5.2□□□□□ -1.58
VPS41-201ENST00000265745 MT1HP80294 61 aa5.2□□□□□ -1.58
VPS41-201ENST00000265745 Q6ZQY7 126 aa5.2□□□□□ -1.58
VPS41-201ENST00000265745 F8WEM9 126 aa5.19□□□□□ -1.58
VPS41-201ENST00000265745 RPL37P61927 97 aaKnown RBP5.19□□□□□ -1.58
VPS41-201ENST00000265745 OCIAD2Q56VL3 154 aa5.18□□□□□ -1.58
VPS41-201ENST00000265745 Q6JHZ5 121 aa5.18□□□□□ -1.58
VPS41-201ENST00000265745 IGFL1Q6UW32 110 aa5.17□□□□□ -1.58
VPS41-201ENST00000265745 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.17□□□□□ -1.58
VPS41-201ENST00000265745 TRBV7-7A0A0K0K1E9 115 aa5.16□□□□□ -1.58
VPS41-201ENST00000265745 CLEC2BQ92478 149 aa5.16□□□□□ -1.58
VPS41-201ENST00000265745 IGKV2-30P06310 120 aa5.15□□□□□ -1.59
VPS41-201ENST00000265745 S100A6P06703 90 aa5.15□□□□□ -1.59
VPS41-201ENST00000265745 CFC1BP0CG36 223 aa5.15□□□□□ -1.59
VPS41-201ENST00000265745 BVES-AS1Q5T3Y7 98 aa5.15□□□□□ -1.59
VPS41-201ENST00000265745 HIST1H4GQ99525 98 aa5.15□□□□□ -1.59
VPS41-201ENST00000265745 C12orf57Q99622 126 aa5.15□□□□□ -1.59
VPS41-201ENST00000265745 COX8AP10176 69 aa5.14□□□□□ -1.59
VPS41-201ENST00000265745 PPDPFLQ8WWR9 84 aa5.14□□□□□ -1.59
VPS41-201ENST00000265745 DLEU1O43261 78 aa5.13□□□□□ -1.59
VPS41-201ENST00000265745 S100A1P23297 94 aa5.13□□□□□ -1.59
VPS41-201ENST00000265745 SNHG12Q9BXW3 62 aa5.13□□□□□ -1.59
VPS41-201ENST00000265745 CFC1P0CG37 223 aa5.12□□□□□ -1.59
VPS41-201ENST00000265745 CRCT1Q9UGL9 99 aa5.12□□□□□ -1.59
VPS41-201ENST00000265745 H3BUT2 72 aa5.11□□□□□ -1.59
VPS41-201ENST00000265745 KRTAP10-6P60371 365 aaPredicted RBP5.11□□□□□ -1.59
VPS41-201ENST00000265745 OBSCN-AS1Q96MR7 158 aa5.11□□□□□ -1.59
VPS41-201ENST00000265745 C14orf144Q96I85 54 aa5.1□□□□□ -1.59
VPS41-201ENST00000265745 H0YGX0 51 aa5.09□□□□□ -1.59
VPS41-201ENST00000265745 LST1O00453 97 aa5.09□□□□□ -1.59
VPS41-201ENST00000265745 COX6B2Q6YFQ2 88 aa5.09□□□□□ -1.59
VPS41-201ENST00000265745 ATP11AUNQ6ZP68 121 aa5.09□□□□□ -1.59
VPS41-201ENST00000265745 HIGD1BQ9P298 99 aa5.09□□□□□ -1.59
VPS41-201ENST00000265745 M0R2T5 61 aa5.08□□□□□ -1.6
VPS41-201ENST00000265745 SNCGO76070 127 aa5.08□□□□□ -1.6
VPS41-201ENST00000265745 Q6Q795 121 aa5.08□□□□□ -1.6
VPS41-201ENST00000265745 RAB37Q96AX2 223 aa5.08□□□□□ -1.6
VPS41-201ENST00000265745 FAM218AQ96MZ4 157 aa5.08□□□□□ -1.6
VPS41-201ENST00000265745 A0A0B4J2C4 111 aa5.07□□□□□ -1.6
VPS41-201ENST00000265745 NDUFV3P56181 108 aaKnown RBP5.07□□□□□ -1.6
VPS41-201ENST00000265745 C2orf91Q6ZV80 131 aa5.06□□□□□ -1.6
VPS41-201ENST00000265745 TEN1Q86WV5 123 aa5.06□□□□□ -1.6
VPS41-201ENST00000265745 Q96NJ1 140 aa5.06□□□□□ -1.6
VPS41-201ENST00000265745 SPATA45Q537H7 98 aa5.05□□□□□ -1.6
VPS41-201ENST00000265745 SS18L2Q9UHA2 77 aa5.05□□□□□ -1.6
VPS41-201ENST00000265745 H3BMG7 143 aa5.04□□□□□ -1.6
VPS41-201ENST00000265745 LCE5AQ5TCM9 118 aa5.04□□□□□ -1.6
VPS41-201ENST00000265745 Q6ZVQ6 151 aa5.04□□□□□ -1.6
VPS41-201ENST00000265745 CEND1Q8N111 149 aa5.04□□□□□ -1.6
VPS41-201ENST00000265745 PRO1854Q9UHT4 67 aa5.04□□□□□ -1.6
VPS41-201ENST00000265745 A0A087WSZ3 146 aa5.03□□□□□ -1.6
VPS41-201ENST00000265745 A0A1B0GX51 115 aa5.03□□□□□ -1.6
VPS41-201ENST00000265745 C20orf166-AS1Q96NR2 134 aa5.03□□□□□ -1.6
VPS41-201ENST00000265745 VAMP8Q9BV40 100 aa5.03□□□□□ -1.6
VPS41-201ENST00000265745 FLGP20930 4061 aaPredicted RBP5.03□□□□□ -1.6
VPS41-201ENST00000265745 A8MUU9 505 aa5.02□□□□□ -1.61
VPS41-201ENST00000265745 FABP2P12104 132 aa5.02□□□□□ -1.61
VPS41-201ENST00000265745 PRAC1Q96KF2 57 aa5.02□□□□□ -1.61
VPS41-201ENST00000265745 A0A1W2PNM2 257 aa5.01□□□□□ -1.61
VPS41-201ENST00000265745 FXYD2P54710 66 aa5.01□□□□□ -1.61
VPS41-201ENST00000265745 TRBV7-4A0A0J9YYF1 115 aa4.97□□□□□ -1.61
VPS41-201ENST00000265745 DSCR10P59022 87 aa4.97□□□□□ -1.61
VPS41-201ENST00000265745 LCE1DQ5T752 114 aa4.97□□□□□ -1.61
VPS41-201ENST00000265745 ANKRD29Q8N6D5 301 aa4.97□□□□□ -1.61
VPS41-201ENST00000265745 ORMDL1Q9P0S3 153 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms