RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 HIGD2AQ9BW72 106 aa8.61□□□□□ -1.03
VMP1-201ENST00000262291 C16orf90A8MZG2 172 aa8.6□□□□□ -1.03
VMP1-201ENST00000262291 ERC2-IT1O76042 136 aa8.6□□□□□ -1.03
VMP1-201ENST00000262291 PANO1I0J062 215 aa8.6□□□□□ -1.03
VMP1-201ENST00000262291 PRYO14603 147 aa8.6□□□□□ -1.03
VMP1-201ENST00000262291 PHF5AQ7RTV0 110 aaKnown RBP8.6□□□□□ -1.03
VMP1-201ENST00000262291 Q6ZRX8 168 aa8.59□□□□□ -1.03
VMP1-201ENST00000262291 KRTAP11-1Q8IUC1 163 aa8.59□□□□□ -1.03
VMP1-201ENST00000262291 KRTAP4-16G5E9R7 235 aaPredicted RBP8.59□□□□□ -1.03
VMP1-201ENST00000262291 UBE2BP63146 152 aa8.59□□□□□ -1.03
VMP1-201ENST00000262291 SRRM2Q9UQ35 2752 aaKnown RBP8.58□□□□□ -1.04
VMP1-201ENST00000262291 PRLHP81277 87 aa8.58□□□□□ -1.04
VMP1-201ENST00000262291 C14orf177Q52M58 125 aa8.58□□□□□ -1.04
VMP1-201ENST00000262291 REG3GQ6UW15 175 aa8.57□□□□□ -1.04
VMP1-201ENST00000262291 Q8N377 158 aa8.57□□□□□ -1.04
VMP1-201ENST00000262291 LY6G6CO95867 125 aa8.56□□□□□ -1.04
VMP1-201ENST00000262291 SPRR1AP35321 89 aa8.56□□□□□ -1.04
VMP1-201ENST00000262291 PSPHP1O15172 72 aa8.55□□□□□ -1.04
VMP1-201ENST00000262291 C9orf163Q8N9P6 203 aa8.55□□□□□ -1.04
VMP1-201ENST00000262291 PMAIP1Q13794 54 aa8.55□□□□□ -1.04
VMP1-201ENST00000262291 DNAH2Q9P225 4427 aa8.53□□□□□ -1.04
VMP1-201ENST00000262291 OCR1Q9BZK8 76 aa8.53□□□□□ -1.04
VMP1-201ENST00000262291 A0A087WTM6 91 aa8.52□□□□□ -1.04
VMP1-201ENST00000262291 IGKV4-1P06312 121 aa8.52□□□□□ -1.04
VMP1-201ENST00000262291 DHRS4-AS1Q9P1J3 65 aa8.52□□□□□ -1.05
VMP1-201ENST00000262291 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.52□□□□□ -1.05
VMP1-201ENST00000262291 C3orf84H3BNL1 204 aa8.52□□□□□ -1.05
VMP1-201ENST00000262291 PRR4Q16378 134 aa8.52□□□□□ -1.05
VMP1-201ENST00000262291 FAM30AQ9NZY2 134 aa8.52□□□□□ -1.05
VMP1-201ENST00000262291 A0A0G2JQZ4 141 aa8.51□□□□□ -1.05
VMP1-201ENST00000262291 PDE6GP18545 87 aa8.51□□□□□ -1.05
VMP1-201ENST00000262291 Q6ZR54 194 aa8.5□□□□□ -1.05
VMP1-201ENST00000262291 A8MU10 97 aa8.49□□□□□ -1.05
VMP1-201ENST00000262291 PRR15Q8IV56 129 aa8.49□□□□□ -1.05
VMP1-201ENST00000262291 H3BQ85 93 aa8.48□□□□□ -1.05
VMP1-201ENST00000262291 hDV103S1A0JD37 113 aa8.47□□□□□ -1.05
VMP1-201ENST00000262291 C1orf64Q8NEQ6 169 aa8.47□□□□□ -1.05
VMP1-201ENST00000262291 HECTD4Q9Y4D8 3996 aa8.47□□□□□ -1.05
VMP1-201ENST00000262291 SMIM29Q86T20 159 aa8.47□□□□□ -1.05
VMP1-201ENST00000262291 RTL8CO15255 209 aa8.46□□□□□ -1.05
VMP1-201ENST00000262291 C1orf134Q5TEV5 83 aa8.45□□□□□ -1.06
VMP1-201ENST00000262291 TNP2Q05952 138 aa8.43□□□□□ -1.06
VMP1-201ENST00000262291 IGLV5-48A0A075B6I7 105 aa8.43□□□□□ -1.06
VMP1-201ENST00000262291 SPACA4Q8TDM5 124 aa8.43□□□□□ -1.06
VMP1-201ENST00000262291 TRAV22A0A0B4J277 110 aa8.42□□□□□ -1.06
VMP1-201ENST00000262291 UBE2AP49459 152 aa8.42□□□□□ -1.06
VMP1-201ENST00000262291 C1orf137Q5JT78 98 aa8.41□□□□□ -1.06
VMP1-201ENST00000262291 LINC00476Q8WZB0 136 aa8.41□□□□□ -1.06
VMP1-201ENST00000262291 IGLV5-52A0A0A0MRZ9 124 aa8.4□□□□□ -1.06
VMP1-201ENST00000262291 A0A1W2PNM2 257 aa8.4□□□□□ -1.06
VMP1-201ENST00000262291 WWC2-AS2Q96NR7 200 aa8.4□□□□□ -1.06
VMP1-201ENST00000262291 A8MUN3 132 aa8.4□□□□□ -1.06
VMP1-201ENST00000262291 Q1T7F1 81 aa8.4□□□□□ -1.06
VMP1-201ENST00000262291 DNAH17Q9UFH2 4485 aa8.4□□□□□ -1.07
VMP1-201ENST00000262291 HYDINQ4G0P3 5121 aa8.39□□□□□ -1.07
VMP1-201ENST00000262291 KRTAP10-2P60368 255 aa8.36□□□□□ -1.07
VMP1-201ENST00000262291 KRTAP21-3Q3LHN1 58 aa8.36□□□□□ -1.07
VMP1-201ENST00000262291 DNAH6Q9C0G6 4158 aa8.36□□□□□ -1.07
VMP1-201ENST00000262291 FRAS1Q86XX4 4008 aa8.34□□□□□ -1.07
VMP1-201ENST00000262291 IGFL1Q6UW32 110 aa8.34□□□□□ -1.07
VMP1-201ENST00000262291 DNAH8Q96JB1 4490 aa8.32□□□□□ -1.08
VMP1-201ENST00000262291 Q8NBF4 154 aa8.32□□□□□ -1.08
VMP1-201ENST00000262291 PSORS1C2Q9UIG4 136 aa8.32□□□□□ -1.08
VMP1-201ENST00000262291 CD164Q04900 197 aa8.31□□□□□ -1.08
VMP1-201ENST00000262291 DEFB116Q30KQ4 102 aa8.31□□□□□ -1.08
VMP1-201ENST00000262291 SPTSSBQ8NFR3 76 aa8.31□□□□□ -1.08
VMP1-201ENST00000262291 ANAPC11Q9NYG5 84 aa8.31□□□□□ -1.08
VMP1-201ENST00000262291 KRTAP13-1Q8IUC0 172 aa8.3□□□□□ -1.08
VMP1-201ENST00000262291 ZCCHC13Q8WW36 166 aaKnown RBP8.29□□□□□ -1.08
VMP1-201ENST00000262291 DNAH11Q96DT5 4516 aa8.29□□□□□ -1.08
VMP1-201ENST00000262291 K7EQZ3 153 aa8.29□□□□□ -1.08
VMP1-201ENST00000262291 H0Y9J4 135 aa8.28□□□□□ -1.08
VMP1-201ENST00000262291 Q5VV11 94 aa8.28□□□□□ -1.08
VMP1-201ENST00000262291 IGLV9-49A0A0B4J1Y8 123 aa8.28□□□□□ -1.08
VMP1-201ENST00000262291 PLAC8Q9NZF1 115 aa8.28□□□□□ -1.08
VMP1-201ENST00000262291 DNAH5Q8TE73 4624 aa8.28□□□□□ -1.08
VMP1-201ENST00000262291 LCE6AA0A183 80 aa8.27□□□□□ -1.09
VMP1-201ENST00000262291 CHKB-CPT1BH3BT56 60 aa8.27□□□□□ -1.09
VMP1-201ENST00000262291 A0A087WSZ3 146 aa8.26□□□□□ -1.09
VMP1-201ENST00000262291 ALMS1Q8TCU4 4167 aa8.26□□□□□ -1.09
VMP1-201ENST00000262291 SPRR4Q96PI1 79 aa8.25□□□□□ -1.09
VMP1-201ENST00000262291 DSCR10P59022 87 aa8.24□□□□□ -1.09
VMP1-201ENST00000262291 RBM12B-AS1Q9P1G2 102 aa8.24□□□□□ -1.09
VMP1-201ENST00000262291 CIRBP-AS1Q8TBR5 109 aa8.23□□□□□ -1.09
VMP1-201ENST00000262291 KRTAP10-1P60331 282 aa8.23□□□□□ -1.09
VMP1-201ENST00000262291 SPRR1BP22528 89 aa8.23□□□□□ -1.09
VMP1-201ENST00000262291 WFDC13Q8IUB5 93 aa8.22□□□□□ -1.09
VMP1-201ENST00000262291 PRR15LQ9BU68 103 aa8.22□□□□□ -1.09
VMP1-201ENST00000262291 CYP4F30PQ9H0H9 118 aa8.22□□□□□ -1.09
VMP1-201ENST00000262291 FAT2Q9NYQ8 4349 aa8.22□□□□□ -1.09
VMP1-201ENST00000262291 IGLV8-61A0A075B6I0 122 aa8.21□□□□□ -1.09
VMP1-201ENST00000262291 PKD1P98161 4303 aa8.21□□□□□ -1.09
VMP1-201ENST00000262291 KTN1-AS1Q86SY8 53 aa8.2□□□□□ -1.1
VMP1-201ENST00000262291 RPL37AP61513 92 aaKnown RBP8.2□□□□□ -1.1
VMP1-201ENST00000262291 HCG22E2RYF7 251 aa8.19□□□□□ -1.1
VMP1-201ENST00000262291 LINC00208Q96KT6 92 aa8.19□□□□□ -1.1
VMP1-201ENST00000262291 ZNF861PO60384 105 aa8.19□□□□□ -1.1
VMP1-201ENST00000262291 Q8N9P0 234 aaPredicted RBP8.17□□□□□ -1.1
VMP1-201ENST00000262291 MOBPQ13875 183 aa8.17□□□□□ -1.1
VMP1-201ENST00000262291 LCA10Q71F78 164 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms