RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 LOC110117498A0A087WWA1 95 aa10.77□□□□□ -0.69
SRSF1-201ENST00000258962 LINC01547P58512 204 aaPredicted RBP10.77□□□□□ -0.69
SRSF1-201ENST00000258962 NDUFV3P56181 108 aaKnown RBP10.76□□□□□ -0.69
SRSF1-201ENST00000258962 A0A1B0GV72 72 aa10.75□□□□□ -0.69
SRSF1-201ENST00000258962 BCE1O60756 84 aa10.75□□□□□ -0.69
SRSF1-201ENST00000258962 ST20-AS1Q8NBB2 130 aa10.75□□□□□ -0.69
SRSF1-201ENST00000258962 PCLOQ9Y6V0 5065 aa10.75□□□□□ -0.69
SRSF1-201ENST00000258962 H0Y9J4 135 aa10.74□□□□□ -0.69
SRSF1-201ENST00000258962 LINC00643Q86TS7 51 aa10.74□□□□□ -0.69
SRSF1-201ENST00000258962 Q8N377 158 aa10.74□□□□□ -0.69
SRSF1-201ENST00000258962 KRTAP13-1Q8IUC0 172 aa10.73□□□□□ -0.69
SRSF1-201ENST00000258962 IGLV5-48A0A075B6I7 105 aa10.72□□□□□ -0.69
SRSF1-201ENST00000258962 DEFB105AQ8NG35 78 aa10.72□□□□□ -0.69
SRSF1-201ENST00000258962 HIGD2AQ9BW72 106 aa10.72□□□□□ -0.69
SRSF1-201ENST00000258962 MT-ATP8P03928 68 aa10.71□□□□□ -0.69
SRSF1-201ENST00000258962 PSORS1C2Q9UIG4 136 aa10.71□□□□□ -0.69
SRSF1-201ENST00000258962 UBE2AP49459 152 aa10.7□□□□□ -0.7
SRSF1-201ENST00000258962 Q6ZQT0 140 aa10.7□□□□□ -0.7
SRSF1-201ENST00000258962 FAT1Q14517 4588 aa10.7□□□□□ -0.7
SRSF1-201ENST00000258962 ABCA13Q86UQ4 5058 aa10.7□□□□□ -0.7
SRSF1-201ENST00000258962 RPL37AP61513 92 aaKnown RBP10.68□□□□□ -0.7
SRSF1-201ENST00000258962 Q6Q795 121 aa10.68□□□□□ -0.7
SRSF1-201ENST00000258962 TRBV7-4A0A0J9YYF1 115 aa10.67□□□□□ -0.7
SRSF1-201ENST00000258962 IMUPQ9GZP8 106 aa10.67□□□□□ -0.7
SRSF1-201ENST00000258962 SRRM2Q9UQ35 2752 aaKnown RBP10.66□□□□□ -0.7
SRSF1-201ENST00000258962 PCP4P48539 62 aa10.65□□□□□ -0.7
SRSF1-201ENST00000258962 C3orf22Q8N5N4 141 aa10.65□□□□□ -0.7
SRSF1-201ENST00000258962 UBL5Q9BZL1 73 aa10.65□□□□□ -0.7
SRSF1-201ENST00000258962 C1orf137Q5JT78 98 aa10.64□□□□□ -0.71
SRSF1-201ENST00000258962 LINC00846Q9NV44 126 aa10.64□□□□□ -0.71
SRSF1-201ENST00000258962 A0A1B0GW54 56 aa10.63□□□□□ -0.71
SRSF1-201ENST00000258962 F8WEM9 126 aa10.63□□□□□ -0.71
SRSF1-201ENST00000258962 TRBV7-7A0A0K0K1E9 115 aa10.62□□□□□ -0.71
SRSF1-201ENST00000258962 SMIM29Q86T20 159 aa10.62□□□□□ -0.71
SRSF1-201ENST00000258962 FLG2Q5D862 2391 aaPredicted RBP10.61□□□□□ -0.71
SRSF1-201ENST00000258962 KRTAP10-4P60372 401 aaPredicted RBP10.61□□□□□ -0.71
SRSF1-201ENST00000258962 ATP5EP2Q5VTU8 51 aa10.61□□□□□ -0.71
SRSF1-201ENST00000258962 Q6JHZ5 121 aa10.61□□□□□ -0.71
SRSF1-201ENST00000258962 VPS13BQ7Z7G8 4022 aa10.6□□□□□ -0.71
SRSF1-201ENST00000258962 SPRR1BP22528 89 aa10.58□□□□□ -0.72
SRSF1-201ENST00000258962 ZNF861PO60384 105 aa10.58□□□□□ -0.72
SRSF1-201ENST00000258962 IGLV7-43P04211 117 aa10.58□□□□□ -0.72
SRSF1-201ENST00000258962 SPRR4Q96PI1 79 aa10.53□□□□□ -0.72
SRSF1-201ENST00000258962 ZNF706Q9Y5V0 76 aaPredicted RBP10.53□□□□□ -0.72
SRSF1-201ENST00000258962 IGLV8-61A0A075B6I0 122 aa10.5□□□□□ -0.73
SRSF1-201ENST00000258962 LINC00483Q53H64 154 aa10.5□□□□□ -0.73
SRSF1-201ENST00000258962 Q6ZVQ6 151 aa10.49□□□□□ -0.73
SRSF1-201ENST00000258962 J3QL48 77 aa10.48□□□□□ -0.73
SRSF1-201ENST00000258962 IGKV3D-7A0A0C4DH55 119 aa10.48□□□□□ -0.73
SRSF1-201ENST00000258962 Q8NBF4 154 aa10.48□□□□□ -0.73
SRSF1-201ENST00000258962 A0A1W2PNM2 257 aa10.47□□□□□ -0.73
SRSF1-201ENST00000258962 CXCL6P80162 114 aa10.47□□□□□ -0.73
SRSF1-201ENST00000258962 NREPQ16612 68 aa10.47□□□□□ -0.73
SRSF1-201ENST00000258962 KRTAP29-1A8MX34 341 aaPredicted RBP10.46□□□□□ -0.74
SRSF1-201ENST00000258962 IGFL1Q6UW32 110 aa10.46□□□□□ -0.74
SRSF1-201ENST00000258962 A0A0G2JQZ4 141 aa10.45□□□□□ -0.74
SRSF1-201ENST00000258962 OXTP01178 125 aa10.45□□□□□ -0.74
SRSF1-201ENST00000258962 DMBT1Q9UGM3 2413 aaPredicted RBP10.45□□□□□ -0.74
SRSF1-201ENST00000258962 SPINK6Q6UWN8 80 aa10.43□□□□□ -0.74
SRSF1-201ENST00000258962 ANAPC13Q9BS18 74 aa10.43□□□□□ -0.74
SRSF1-201ENST00000258962 ANAPC11Q9NYG5 84 aa10.43□□□□□ -0.74
SRSF1-201ENST00000258962 CRYGAP11844 174 aa10.42□□□□□ -0.74
SRSF1-201ENST00000258962 HIST1H4AP62805 103 aaKnown RBP10.41□□□□□ -0.74
SRSF1-201ENST00000258962 MYCBP2O75592 4640 aa10.4□□□□□ -0.74
SRSF1-201ENST00000258962 IGLV9-49A0A0B4J1Y8 123 aa10.39□□□□□ -0.75
SRSF1-201ENST00000258962 FAM236AA0A1B0GUQ0 79 aa10.39□□□□□ -0.75
SRSF1-201ENST00000258962 FAM236BA0A1B0GV22 79 aa10.39□□□□□ -0.75
SRSF1-201ENST00000258962 BPY2O14599 106 aa10.36□□□□□ -0.75
SRSF1-201ENST00000258962 C9orf153Q5TBE3 101 aa10.36□□□□□ -0.75
SRSF1-201ENST00000258962 ATOX1O00244 68 aa10.35□□□□□ -0.75
SRSF1-201ENST00000258962 MOBPQ13875 183 aa10.34□□□□□ -0.75
SRSF1-201ENST00000258962 PKHD1L1Q86WI1 4243 aa10.32□□□□□ -0.76
SRSF1-201ENST00000258962 KRTAP1-4P0C5Y4 121 aa10.31□□□□□ -0.76
SRSF1-201ENST00000258962 LRP1Q07954 4544 aaKnown RBP10.29□□□□□ -0.76
SRSF1-201ENST00000258962 A0A087WVE0 104 aa10.28□□□□□ -0.76
SRSF1-201ENST00000258962 A0A087X002 238 aa10.28□□□□□ -0.76
SRSF1-201ENST00000258962 A0A087WSZ3 146 aa10.28□□□□□ -0.76
SRSF1-201ENST00000258962 FAM229BQ4G0N7 80 aa10.27□□□□□ -0.77
SRSF1-201ENST00000258962 KRTAP13-2Q52LG2 175 aa10.26□□□□□ -0.77
SRSF1-201ENST00000258962 MT1HL1P0DM35 61 aa10.25□□□□□ -0.77
SRSF1-201ENST00000258962 SMIM20Q8N5G0 67 aa10.25□□□□□ -0.77
SRSF1-201ENST00000258962 FAT3Q8TDW7 4589 aa10.24□□□□□ -0.77
SRSF1-201ENST00000258962 SS18L2Q9UHA2 77 aa10.23□□□□□ -0.77
SRSF1-201ENST00000258962 HRCT1Q6UXD1 115 aa10.22□□□□□ -0.77
SRSF1-201ENST00000258962 SSBP3-AS1Q7Z2R9 100 aa10.22□□□□□ -0.77
SRSF1-201ENST00000258962 HERC1Q15751 4861 aa10.21□□□□□ -0.78
SRSF1-201ENST00000258962 J3KT08 172 aa10.2□□□□□ -0.78
SRSF1-201ENST00000258962 IGKV4-1P06312 121 aa10.2□□□□□ -0.78
SRSF1-201ENST00000258962 KRTAP10-8P60410 259 aa10.19□□□□□ -0.78
SRSF1-201ENST00000258962 SERP2Q8N6R1 65 aa10.19□□□□□ -0.78
SRSF1-201ENST00000258962 UQCRQO14949 82 aa10.18□□□□□ -0.78
SRSF1-201ENST00000258962 COX7CP15954 63 aa10.17□□□□□ -0.78
SRSF1-201ENST00000258962 CD164Q04900 197 aa10.17□□□□□ -0.78
SRSF1-201ENST00000258962 DSCR10P59022 87 aa10.15□□□□□ -0.78
SRSF1-201ENST00000258962 PRR26Q8N8Z3 221 aa10.15□□□□□ -0.78
SRSF1-201ENST00000258962 Q8N9L7 120 aa10.15□□□□□ -0.78
SRSF1-201ENST00000258962 DEFB116Q30KQ4 102 aa10.14□□□□□ -0.79
SRSF1-201ENST00000258962 LINC00472Q9H8W2 130 aa10.14□□□□□ -0.79
SRSF1-201ENST00000258962 TRAV7A0A075B6U4 112 aa10.12□□□□□ -0.79
SRSF1-201ENST00000258962 Q96NJ1 140 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms