RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 TRBV7-4A0A0J9YYF1 115 aa5.66□□□□□ -1.5
CKAP2-201ENST00000258607 PSORS1C2Q9UIG4 136 aa5.66□□□□□ -1.5
CKAP2-201ENST00000258607 COX7CP15954 63 aa5.65□□□□□ -1.5
CKAP2-201ENST00000258607 Q6Q795 121 aa5.64□□□□□ -1.51
CKAP2-201ENST00000258607 SERP2Q8N6R1 65 aa5.64□□□□□ -1.51
CKAP2-201ENST00000258607 DNAH1Q9P2D7 4330 aa5.63□□□□□ -1.51
CKAP2-201ENST00000258607 UQCRQO14949 82 aa5.63□□□□□ -1.51
CKAP2-201ENST00000258607 DNAH11Q96DT5 4516 aa5.63□□□□□ -1.51
CKAP2-201ENST00000258607 DNAH6Q9C0G6 4158 aa5.63□□□□□ -1.51
CKAP2-201ENST00000258607 TLX1NBP0CAT3 122 aa5.63□□□□□ -1.51
CKAP2-201ENST00000258607 LOC110117498A0A087WWA1 95 aa5.62□□□□□ -1.51
CKAP2-201ENST00000258607 KRTAP4-16G5E9R7 235 aaPredicted RBP5.61□□□□□ -1.51
CKAP2-201ENST00000258607 Q6ZRN7 208 aaPredicted RBP5.61□□□□□ -1.51
CKAP2-201ENST00000258607 Q8NBF4 154 aa5.61□□□□□ -1.51
CKAP2-201ENST00000258607 IMUPQ9GZP8 106 aa5.61□□□□□ -1.51
CKAP2-201ENST00000258607 HYDINQ4G0P3 5121 aa5.61□□□□□ -1.51
CKAP2-201ENST00000258607 CNBPP62633 177 aaKnown RBP5.61□□□□□ -1.51
CKAP2-201ENST00000258607 IGHV6-1A0A0B4J1U7 121 aa5.6□□□□□ -1.51
CKAP2-201ENST00000258607 LINC01600Q96MT4 127 aa5.6□□□□□ -1.51
CKAP2-201ENST00000258607 VPS13DQ5THJ4 4388 aa5.6□□□□□ -1.51
CKAP2-201ENST00000258607 IGKV4-1P06312 121 aa5.59□□□□□ -1.51
CKAP2-201ENST00000258607 PDE6GP18545 87 aa5.59□□□□□ -1.51
CKAP2-201ENST00000258607 SPRR1AP35321 89 aa5.57□□□□□ -1.52
CKAP2-201ENST00000258607 WWC2-AS2Q96NR7 200 aa5.57□□□□□ -1.52
CKAP2-201ENST00000258607 TRBV7-6A0A0J9YX20 115 aa5.56□□□□□ -1.52
CKAP2-201ENST00000258607 BCE1O60756 84 aa5.56□□□□□ -1.52
CKAP2-201ENST00000258607 MPLKIPQ8TAP9 179 aa5.56□□□□□ -1.52
CKAP2-201ENST00000258607 DNAH2Q9P225 4427 aa5.56□□□□□ -1.52
CKAP2-201ENST00000258607 SPACA4Q8TDM5 124 aa5.55□□□□□ -1.52
CKAP2-201ENST00000258607 DSCR10P59022 87 aa5.55□□□□□ -1.52
CKAP2-201ENST00000258607 KRTAP10-1P60331 282 aa5.55□□□□□ -1.52
CKAP2-201ENST00000258607 PCOTHQ58A44 107 aa5.55□□□□□ -1.52
CKAP2-201ENST00000258607 CDK2AP2O75956 126 aa5.55□□□□□ -1.52
CKAP2-201ENST00000258607 LINC00474Q9P2X8 69 aa5.55□□□□□ -1.52
CKAP2-201ENST00000258607 IGLV5-48A0A075B6I7 105 aa5.54□□□□□ -1.52
CKAP2-201ENST00000258607 LINC00208Q96KT6 92 aa5.54□□□□□ -1.52
CKAP2-201ENST00000258607 ATP5EP2Q5VTU8 51 aa5.54□□□□□ -1.52
CKAP2-201ENST00000258607 PKHD1P08F94 4074 aa5.53□□□□□ -1.52
CKAP2-201ENST00000258607 DNAH8Q96JB1 4490 aa5.53□□□□□ -1.52
CKAP2-201ENST00000258607 TMEM254Q8TBM7 123 aa5.53□□□□□ -1.52
CKAP2-201ENST00000258607 PLA2G2DQ9UNK4 145 aa5.53□□□□□ -1.52
CKAP2-201ENST00000258607 F8WDY8 70 aa5.52□□□□□ -1.53
CKAP2-201ENST00000258607 IGLV5-37A0A075B6J1 123 aa5.52□□□□□ -1.53
CKAP2-201ENST00000258607 CXCL6P80162 114 aa5.52□□□□□ -1.53
CKAP2-201ENST00000258607 Q6ZR54 194 aa5.51□□□□□ -1.53
CKAP2-201ENST00000258607 TRAV7A0A075B6U4 112 aa5.5□□□□□ -1.53
CKAP2-201ENST00000258607 CASC2Q6XLA1 102 aa5.5□□□□□ -1.53
CKAP2-201ENST00000258607 FAT1Q14517 4588 aa5.5□□□□□ -1.53
CKAP2-201ENST00000258607 HCG22E2RYF7 251 aa5.5□□□□□ -1.53
CKAP2-201ENST00000258607 CRYGAP11844 174 aa5.49□□□□□ -1.53
CKAP2-201ENST00000258607 SPRR4Q96PI1 79 aa5.49□□□□□ -1.53
CKAP2-201ENST00000258607 A0A087X002 238 aa5.49□□□□□ -1.53
CKAP2-201ENST00000258607 NOTCH2NLQ7Z3S9 236 aa5.49□□□□□ -1.53
CKAP2-201ENST00000258607 FAM236DA0A1B0GTK5 79 aa5.49□□□□□ -1.53
CKAP2-201ENST00000258607 FAM236CP0DP71 79 aa5.49□□□□□ -1.53
CKAP2-201ENST00000258607 DNAH17Q9UFH2 4485 aa5.48□□□□□ -1.53
CKAP2-201ENST00000258607 ZNF861PO60384 105 aa5.48□□□□□ -1.53
CKAP2-201ENST00000258607 H3BQ85 93 aa5.48□□□□□ -1.53
CKAP2-201ENST00000258607 NDUFB1O75438 58 aa5.47□□□□□ -1.53
CKAP2-201ENST00000258607 LRP1BQ9NZR2 4599 aa5.47□□□□□ -1.53
CKAP2-201ENST00000258607 KMT2CQ8NEZ4 4911 aaKnown RBP5.47□□□□□ -1.53
CKAP2-201ENST00000258607 OXTP01178 125 aa5.46□□□□□ -1.54
CKAP2-201ENST00000258607 IGLV7-43P04211 117 aa5.46□□□□□ -1.54
CKAP2-201ENST00000258607 LCE2DQ5TA82 110 aaPredicted RBP5.46□□□□□ -1.54
CKAP2-201ENST00000258607 HECTD4Q9Y4D8 3996 aa5.45□□□□□ -1.54
CKAP2-201ENST00000258607 H7BZZ5 65 aa5.45□□□□□ -1.54
CKAP2-201ENST00000258607 PLA2G1BP04054 148 aaKnown RBP5.45□□□□□ -1.54
CKAP2-201ENST00000258607 C4orf26Q17RF5 130 aa5.45□□□□□ -1.54
CKAP2-201ENST00000258607 C5orf47Q569G3 176 aa5.44□□□□□ -1.54
CKAP2-201ENST00000258607 PRR15Q8IV56 129 aa5.43□□□□□ -1.54
CKAP2-201ENST00000258607 H0Y9P7 68 aa5.42□□□□□ -1.54
CKAP2-201ENST00000258607 J3KT08 172 aa5.42□□□□□ -1.54
CKAP2-201ENST00000258607 PRR26Q8N8Z3 221 aa5.42□□□□□ -1.54
CKAP2-201ENST00000258607 hDV103S1A0JD37 113 aa5.42□□□□□ -1.54
CKAP2-201ENST00000258607 MP68P56378 58 aa5.42□□□□□ -1.54
CKAP2-201ENST00000258607 OCR1Q9BZK8 76 aa5.42□□□□□ -1.54
CKAP2-201ENST00000258607 C4orf48Q5BLP8 95 aa5.41□□□□□ -1.54
CKAP2-201ENST00000258607 PLAC8Q9NZF1 115 aa5.41□□□□□ -1.54
CKAP2-201ENST00000258607 TMEM258P61165 79 aa5.4□□□□□ -1.54
CKAP2-201ENST00000258607 C9orf92A6NGG3 77 aa5.4□□□□□ -1.55
CKAP2-201ENST00000258607 FAT2Q9NYQ8 4349 aa5.39□□□□□ -1.55
CKAP2-201ENST00000258607 FAM229BQ4G0N7 80 aa5.39□□□□□ -1.55
CKAP2-201ENST00000258607 PSPHP1O15172 72 aa5.39□□□□□ -1.55
CKAP2-201ENST00000258607 ZNF706Q9Y5V0 76 aaPredicted RBP5.38□□□□□ -1.55
CKAP2-201ENST00000258607 A8MWP4 228 aa5.38□□□□□ -1.55
CKAP2-201ENST00000258607 C1orf64Q8NEQ6 169 aa5.38□□□□□ -1.55
CKAP2-201ENST00000258607 DNAH5Q8TE73 4624 aa5.37□□□□□ -1.55
CKAP2-201ENST00000258607 KRTAP13-1Q8IUC0 172 aa5.37□□□□□ -1.55
CKAP2-201ENST00000258607 TYMSOSQ8TAI1 123 aa5.37□□□□□ -1.55
CKAP2-201ENST00000258607 PKIGQ9Y2B9 76 aa5.37□□□□□ -1.55
CKAP2-201ENST00000258607 DYNC2H1Q8NCM8 4307 aaKnown RBP5.37□□□□□ -1.55
CKAP2-201ENST00000258607 LINC00472Q9H8W2 130 aa5.36□□□□□ -1.55
CKAP2-201ENST00000258607 IGKV2D-30A0A075B6S6 120 aa5.36□□□□□ -1.55
CKAP2-201ENST00000258607 IGKV2-30P06310 120 aa5.36□□□□□ -1.55
CKAP2-201ENST00000258607 MYCBP2O75592 4640 aa5.36□□□□□ -1.55
CKAP2-201ENST00000258607 VPS13BQ7Z7G8 4022 aa5.36□□□□□ -1.55
CKAP2-201ENST00000258607 A0A0U1RQV1 116 aa5.34□□□□□ -1.55
CKAP2-201ENST00000258607 C8orf17Q9NRJ1 99 aa5.34□□□□□ -1.55
CKAP2-201ENST00000258607 KRTAP13-2Q52LG2 175 aa5.33□□□□□ -1.56
CKAP2-201ENST00000258607 KLKP1Q107X0 134 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms