RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 EPM2AB3EWF7 344 aa12.17□□□□□ -0.46
CDC42EP1-201ENST00000249014 OXTP01178 125 aa12.17□□□□□ -0.46
CDC42EP1-201ENST00000249014 PANO1I0J062 215 aa12.16□□□□□ -0.46
CDC42EP1-201ENST00000249014 DSCR10P59022 87 aa12.16□□□□□ -0.46
CDC42EP1-201ENST00000249014 IGLV8-61A0A075B6I0 122 aa12.15□□□□□ -0.46
CDC42EP1-201ENST00000249014 STARD9Q9P2P6 4700 aa12.13□□□□□ -0.47
CDC42EP1-201ENST00000249014 FAM236DA0A1B0GTK5 79 aa12.13□□□□□ -0.47
CDC42EP1-201ENST00000249014 FAM236CP0DP71 79 aa12.13□□□□□ -0.47
CDC42EP1-201ENST00000249014 H0Y9J4 135 aa12.12□□□□□ -0.47
CDC42EP1-201ENST00000249014 K7EQZ3 153 aa12.12□□□□□ -0.47
CDC42EP1-201ENST00000249014 UBE2AP49459 152 aa12.12□□□□□ -0.47
CDC42EP1-201ENST00000249014 TMEM254Q8TBM7 123 aa12.12□□□□□ -0.47
CDC42EP1-201ENST00000249014 LINC00474Q9P2X8 69 aa12.09□□□□□ -0.47
CDC42EP1-201ENST00000249014 PRKDCP78527 4128 aaKnown RBP12.08□□□□□ -0.48
CDC42EP1-201ENST00000249014 SPRR1BP22528 89 aa12.08□□□□□ -0.48
CDC42EP1-201ENST00000249014 A0A087WSZ3 146 aa12.08□□□□□ -0.48
CDC42EP1-201ENST00000249014 VPS13DQ5THJ4 4388 aa12.07□□□□□ -0.48
CDC42EP1-201ENST00000249014 DEFB116Q30KQ4 102 aa12.07□□□□□ -0.48
CDC42EP1-201ENST00000249014 PKIGQ9Y2B9 76 aa12.07□□□□□ -0.48
CDC42EP1-201ENST00000249014 FAM30AQ9NZY2 134 aa12.06□□□□□ -0.48
CDC42EP1-201ENST00000249014 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.06□□□□□ -0.48
CDC42EP1-201ENST00000249014 A0A0U1RQV1 116 aa12.04□□□□□ -0.48
CDC42EP1-201ENST00000249014 NDUFC1O43677 76 aa12.04□□□□□ -0.48
CDC42EP1-201ENST00000249014 KRTAP13-1Q8IUC0 172 aa12.03□□□□□ -0.48
CDC42EP1-201ENST00000249014 SPACA4Q8TDM5 124 aa12.03□□□□□ -0.48
CDC42EP1-201ENST00000249014 C5orf47Q569G3 176 aa12.02□□□□□ -0.48
CDC42EP1-201ENST00000249014 A0A087WTM6 91 aa12.01□□□□□ -0.49
CDC42EP1-201ENST00000249014 HCG22E2RYF7 251 aa11.98□□□□□ -0.49
CDC42EP1-201ENST00000249014 SERP1Q9Y6X1 66 aa11.98□□□□□ -0.49
CDC42EP1-201ENST00000249014 MEGF8Q7Z7M0 2845 aa11.97□□□□□ -0.49
CDC42EP1-201ENST00000249014 LCE6AA0A183 80 aa11.96□□□□□ -0.49
CDC42EP1-201ENST00000249014 KRTAP21-3Q3LHN1 58 aa11.96□□□□□ -0.49
CDC42EP1-201ENST00000249014 DNHD1Q96M86 4753 aa11.96□□□□□ -0.49
CDC42EP1-201ENST00000249014 RPL37AP61513 92 aaKnown RBP11.96□□□□□ -0.5
CDC42EP1-201ENST00000249014 KMT2AQ03164 3969 aa11.95□□□□□ -0.5
CDC42EP1-201ENST00000249014 HECTD4Q9Y4D8 3996 aa11.95□□□□□ -0.5
CDC42EP1-201ENST00000249014 DNAH2Q9P225 4427 aa11.92□□□□□ -0.5
CDC42EP1-201ENST00000249014 RTL8CO15255 209 aa11.92□□□□□ -0.5
CDC42EP1-201ENST00000249014 Q6ZR54 194 aa11.92□□□□□ -0.5
CDC42EP1-201ENST00000249014 Q5XG85 94 aa11.91□□□□□ -0.5
CDC42EP1-201ENST00000249014 WFDC13Q8IUB5 93 aa11.91□□□□□ -0.5
CDC42EP1-201ENST00000249014 LINC00472Q9H8W2 130 aa11.9□□□□□ -0.5
CDC42EP1-201ENST00000249014 ATP5EP56381 51 aaPredicted RBP11.89□□□□□ -0.51
CDC42EP1-201ENST00000249014 FBN3Q75N90 2809 aa11.88□□□□□ -0.51
CDC42EP1-201ENST00000249014 IGLV9-49A0A0B4J1Y8 123 aa11.86□□□□□ -0.51
CDC42EP1-201ENST00000249014 KRTAP29-1A8MX34 341 aaPredicted RBP11.85□□□□□ -0.51
CDC42EP1-201ENST00000249014 C4orf26Q17RF5 130 aa11.85□□□□□ -0.51
CDC42EP1-201ENST00000249014 ZCCHC13Q8WW36 166 aaKnown RBP11.85□□□□□ -0.51
CDC42EP1-201ENST00000249014 DNAH17Q9UFH2 4485 aa11.85□□□□□ -0.51
CDC42EP1-201ENST00000249014 PRR15Q8IV56 129 aa11.85□□□□□ -0.51
CDC42EP1-201ENST00000249014 PSORS1C2Q9UIG4 136 aa11.85□□□□□ -0.51
CDC42EP1-201ENST00000249014 A8MWP4 228 aa11.84□□□□□ -0.51
CDC42EP1-201ENST00000249014 IGLV5-52A0A0A0MRZ9 124 aa11.83□□□□□ -0.52
CDC42EP1-201ENST00000249014 LINC00483Q53H64 154 aa11.83□□□□□ -0.52
CDC42EP1-201ENST00000249014 PLAC8Q9NZF1 115 aa11.82□□□□□ -0.52
CDC42EP1-201ENST00000249014 TGP01266 2768 aa11.8□□□□□ -0.52
CDC42EP1-201ENST00000249014 DNAH8Q96JB1 4490 aa11.8□□□□□ -0.52
CDC42EP1-201ENST00000249014 FRAS1Q86XX4 4008 aa11.8□□□□□ -0.52
CDC42EP1-201ENST00000249014 CASC2Q6XLA1 102 aa11.79□□□□□ -0.52
CDC42EP1-201ENST00000249014 C1orf134Q5TEV5 83 aa11.77□□□□□ -0.53
CDC42EP1-201ENST00000249014 WWC2-AS2Q96NR7 200 aa11.77□□□□□ -0.53
CDC42EP1-201ENST00000249014 FP248Q71RG6 208 aaPredicted RBP11.77□□□□□ -0.53
CDC42EP1-201ENST00000249014 Q96NJ1 140 aa11.76□□□□□ -0.53
CDC42EP1-201ENST00000249014 ANAPC11Q9NYG5 84 aa11.76□□□□□ -0.53
CDC42EP1-201ENST00000249014 SMIM26A0A096LP01 95 aa11.75□□□□□ -0.53
CDC42EP1-201ENST00000249014 HRCT1Q6UXD1 115 aa11.75□□□□□ -0.53
CDC42EP1-201ENST00000249014 ZNF706Q9Y5V0 76 aaPredicted RBP11.75□□□□□ -0.53
CDC42EP1-201ENST00000249014 ZNF861PO60384 105 aa11.74□□□□□ -0.53
CDC42EP1-201ENST00000249014 MOBPQ13875 183 aa11.73□□□□□ -0.53
CDC42EP1-201ENST00000249014 FAM229BQ4G0N7 80 aa11.73□□□□□ -0.53
CDC42EP1-201ENST00000249014 LY6G6CO95867 125 aa11.72□□□□□ -0.53
CDC42EP1-201ENST00000249014 MMP24-AS1A0A0U1RRL7 71 aa11.71□□□□□ -0.53
CDC42EP1-201ENST00000249014 MP68P56378 58 aa11.69□□□□□ -0.54
CDC42EP1-201ENST00000249014 LINC00208Q96KT6 92 aa11.68□□□□□ -0.54
CDC42EP1-201ENST00000249014 NDUFB1O75438 58 aa11.67□□□□□ -0.54
CDC42EP1-201ENST00000249014 H0Y9P7 68 aa11.65□□□□□ -0.54
CDC42EP1-201ENST00000249014 DNAH6Q9C0G6 4158 aa11.65□□□□□ -0.54
CDC42EP1-201ENST00000249014 TRAV22A0A0B4J277 110 aa11.65□□□□□ -0.54
CDC42EP1-201ENST00000249014 hDV103S1A0JD37 113 aa11.64□□□□□ -0.55
CDC42EP1-201ENST00000249014 IGLV7-43P04211 117 aa11.63□□□□□ -0.55
CDC42EP1-201ENST00000249014 PRR4Q16378 134 aa11.62□□□□□ -0.55
CDC42EP1-201ENST00000249014 C1orf64Q8NEQ6 169 aa11.62□□□□□ -0.55
CDC42EP1-201ENST00000249014 KRTAP10-2P60368 255 aa11.61□□□□□ -0.55
CDC42EP1-201ENST00000249014 ASB16-AS1Q495Z4 193 aa11.61□□□□□ -0.55
CDC42EP1-201ENST00000249014 DNAH5Q8TE73 4624 aa11.59□□□□□ -0.55
CDC42EP1-201ENST00000249014 CYP4F30PQ9H0H9 118 aa11.58□□□□□ -0.56
CDC42EP1-201ENST00000249014 ALMS1Q8TCU4 4167 aa11.58□□□□□ -0.56
CDC42EP1-201ENST00000249014 H3BPC8 53 aa11.58□□□□□ -0.56
CDC42EP1-201ENST00000249014 C8orf17Q9NRJ1 99 aa11.58□□□□□ -0.56
CDC42EP1-201ENST00000249014 CIRBP-AS1Q8TBR5 109 aa11.57□□□□□ -0.56
CDC42EP1-201ENST00000249014 DNAH11Q96DT5 4516 aa11.57□□□□□ -0.56
CDC42EP1-201ENST00000249014 MPLKIPQ8TAP9 179 aa11.57□□□□□ -0.56
CDC42EP1-201ENST00000249014 IGHV6-1A0A0B4J1U7 121 aa11.56□□□□□ -0.56
CDC42EP1-201ENST00000249014 A0A1B0GVX0 72 aa11.56□□□□□ -0.56
CDC42EP1-201ENST00000249014 A0A087X002 238 aa11.51□□□□□ -0.57
CDC42EP1-201ENST00000249014 NOTCH2NLQ7Z3S9 236 aa11.51□□□□□ -0.57
CDC42EP1-201ENST00000249014 CDK2AP2O75956 126 aa11.5□□□□□ -0.57
CDC42EP1-201ENST00000249014 PKD1P98161 4303 aa11.49□□□□□ -0.57
CDC42EP1-201ENST00000249014 LINC00336Q6ZUF6 198 aa11.48□□□□□ -0.57
CDC42EP1-201ENST00000249014 SPANXA2-OT1Q8N9U9 137 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms