RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 STARD9Q9P2P6 4700 aa10.01□□□□□ -0.81
LRFN1-201ENST00000248668 REG3GQ6UW15 175 aa10.01□□□□□ -0.81
LRFN1-201ENST00000248668 SPRR1AP35321 89 aa10.01□□□□□ -0.81
LRFN1-201ENST00000248668 A0A0G2JQZ4 141 aa10□□□□□ -0.81
LRFN1-201ENST00000248668 BPY2O14599 106 aa10□□□□□ -0.81
LRFN1-201ENST00000248668 SPTSSBQ8NFR3 76 aa10□□□□□ -0.81
LRFN1-201ENST00000248668 DNHD1Q96M86 4753 aa9.99□□□□□ -0.81
LRFN1-201ENST00000248668 C16orf90A8MZG2 172 aa9.98□□□□□ -0.81
LRFN1-201ENST00000248668 NDUFC1O43677 76 aa9.98□□□□□ -0.81
LRFN1-201ENST00000248668 MEGF8Q7Z7M0 2845 aa9.98□□□□□ -0.81
LRFN1-201ENST00000248668 DYNC2H1Q8NCM8 4307 aaKnown RBP9.97□□□□□ -0.81
LRFN1-201ENST00000248668 A8MU10 97 aa9.97□□□□□ -0.81
LRFN1-201ENST00000248668 PHF5AQ7RTV0 110 aaKnown RBP9.97□□□□□ -0.81
LRFN1-201ENST00000248668 BCE1O60756 84 aa9.96□□□□□ -0.81
LRFN1-201ENST00000248668 CNBPP62633 177 aaKnown RBP9.96□□□□□ -0.82
LRFN1-201ENST00000248668 KRTAP11-1Q8IUC1 163 aa9.96□□□□□ -0.82
LRFN1-201ENST00000248668 NBDYA0A0U1RRE5 68 aa9.95□□□□□ -0.82
LRFN1-201ENST00000248668 C1orf137Q5JT78 98 aa9.95□□□□□ -0.82
LRFN1-201ENST00000248668 CXCL6P80162 114 aa9.94□□□□□ -0.82
LRFN1-201ENST00000248668 FAM30AQ9NZY2 134 aa9.94□□□□□ -0.82
LRFN1-201ENST00000248668 A0A1W2PNM2 257 aa9.93□□□□□ -0.82
LRFN1-201ENST00000248668 ATP5EP56381 51 aaPredicted RBP9.93□□□□□ -0.82
LRFN1-201ENST00000248668 IGLV5-48A0A075B6I7 105 aa9.92□□□□□ -0.82
LRFN1-201ENST00000248668 NUPR2A6NF83 97 aa9.92□□□□□ -0.82
LRFN1-201ENST00000248668 PANO1I0J062 215 aa9.92□□□□□ -0.82
LRFN1-201ENST00000248668 KMT2AQ03164 3969 aa9.91□□□□□ -0.82
LRFN1-201ENST00000248668 C14orf177Q52M58 125 aa9.9□□□□□ -0.82
LRFN1-201ENST00000248668 TNP2Q05952 138 aa9.88□□□□□ -0.83
LRFN1-201ENST00000248668 A8MUN3 132 aa9.88□□□□□ -0.83
LRFN1-201ENST00000248668 C9orf163Q8N9P6 203 aa9.87□□□□□ -0.83
LRFN1-201ENST00000248668 SMIM29Q86T20 159 aa9.87□□□□□ -0.83
LRFN1-201ENST00000248668 PRR15Q8IV56 129 aa9.86□□□□□ -0.83
LRFN1-201ENST00000248668 LINC00476Q8WZB0 136 aa9.86□□□□□ -0.83
LRFN1-201ENST00000248668 CD164Q04900 197 aa9.86□□□□□ -0.83
LRFN1-201ENST00000248668 Q6ZRN7 208 aaPredicted RBP9.86□□□□□ -0.83
LRFN1-201ENST00000248668 VPS13DQ5THJ4 4388 aa9.85□□□□□ -0.83
LRFN1-201ENST00000248668 Q8NBF4 154 aa9.85□□□□□ -0.83
LRFN1-201ENST00000248668 C1orf64Q8NEQ6 169 aa9.84□□□□□ -0.83
LRFN1-201ENST00000248668 OCR1Q9BZK8 76 aa9.84□□□□□ -0.83
LRFN1-201ENST00000248668 IGKV4-1P06312 121 aa9.83□□□□□ -0.84
LRFN1-201ENST00000248668 DEFB116Q30KQ4 102 aa9.83□□□□□ -0.84
LRFN1-201ENST00000248668 UBE2AP49459 152 aa9.82□□□□□ -0.84
LRFN1-201ENST00000248668 TRAV22A0A0B4J277 110 aa9.82□□□□□ -0.84
LRFN1-201ENST00000248668 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.82□□□□□ -0.84
LRFN1-201ENST00000248668 C4orf48Q5BLP8 95 aa9.81□□□□□ -0.84
LRFN1-201ENST00000248668 CHKB-CPT1BH3BT56 60 aa9.81□□□□□ -0.84
LRFN1-201ENST00000248668 IGFL1Q6UW32 110 aa9.81□□□□□ -0.84
LRFN1-201ENST00000248668 RBM12B-AS1Q9P1G2 102 aa9.8□□□□□ -0.84
LRFN1-201ENST00000248668 DNAH2Q9P225 4427 aa9.79□□□□□ -0.84
LRFN1-201ENST00000248668 FBN3Q75N90 2809 aa9.77□□□□□ -0.84
LRFN1-201ENST00000248668 hDV103S1A0JD37 113 aa9.77□□□□□ -0.84
LRFN1-201ENST00000248668 HECTD4Q9Y4D8 3996 aa9.77□□□□□ -0.84
LRFN1-201ENST00000248668 A0A087WSZ3 146 aa9.77□□□□□ -0.85
LRFN1-201ENST00000248668 A0A087WTM6 91 aa9.76□□□□□ -0.85
LRFN1-201ENST00000248668 SPRR4Q96PI1 79 aa9.76□□□□□ -0.85
LRFN1-201ENST00000248668 FRAS1Q86XX4 4008 aa9.74□□□□□ -0.85
LRFN1-201ENST00000248668 K7EQZ3 153 aa9.74□□□□□ -0.85
LRFN1-201ENST00000248668 DSCR10P59022 87 aa9.72□□□□□ -0.85
LRFN1-201ENST00000248668 RTL8CO15255 209 aa9.71□□□□□ -0.85
LRFN1-201ENST00000248668 LY6G6CO95867 125 aa9.71□□□□□ -0.86
LRFN1-201ENST00000248668 SPACA4Q8TDM5 124 aa9.71□□□□□ -0.86
LRFN1-201ENST00000248668 PRR15LQ9BU68 103 aa9.71□□□□□ -0.86
LRFN1-201ENST00000248668 RPL37AP61513 92 aaKnown RBP9.69□□□□□ -0.86
LRFN1-201ENST00000248668 A6NED7 52 aa9.68□□□□□ -0.86
LRFN1-201ENST00000248668 IGLV9-49A0A0B4J1Y8 123 aa9.68□□□□□ -0.86
LRFN1-201ENST00000248668 Q1T7F1 81 aa9.67□□□□□ -0.86
LRFN1-201ENST00000248668 A0A1B0GW54 56 aa9.66□□□□□ -0.86
LRFN1-201ENST00000248668 KTN1-AS1Q86SY8 53 aa9.66□□□□□ -0.86
LRFN1-201ENST00000248668 HCG22E2RYF7 251 aa9.66□□□□□ -0.86
LRFN1-201ENST00000248668 Q6ZR54 194 aa9.66□□□□□ -0.86
LRFN1-201ENST00000248668 ANAPC11Q9NYG5 84 aa9.65□□□□□ -0.86
LRFN1-201ENST00000248668 H0Y9J4 135 aa9.65□□□□□ -0.86
LRFN1-201ENST00000248668 WFDC13Q8IUB5 93 aa9.64□□□□□ -0.87
LRFN1-201ENST00000248668 DNAH17Q9UFH2 4485 aa9.64□□□□□ -0.87
LRFN1-201ENST00000248668 IGLV8-61A0A075B6I0 122 aa9.64□□□□□ -0.87
LRFN1-201ENST00000248668 IGLV5-52A0A0A0MRZ9 124 aa9.63□□□□□ -0.87
LRFN1-201ENST00000248668 C1orf134Q5TEV5 83 aa9.63□□□□□ -0.87
LRFN1-201ENST00000248668 KRTAP13-1Q8IUC0 172 aa9.63□□□□□ -0.87
LRFN1-201ENST00000248668 PSORS1C2Q9UIG4 136 aa9.63□□□□□ -0.87
LRFN1-201ENST00000248668 DNAH6Q9C0G6 4158 aa9.62□□□□□ -0.87
LRFN1-201ENST00000248668 DNAH8Q96JB1 4490 aa9.62□□□□□ -0.87
LRFN1-201ENST00000248668 H3BS24 57 aa9.62□□□□□ -0.87
LRFN1-201ENST00000248668 SPRR1BP22528 89 aa9.61□□□□□ -0.87
LRFN1-201ENST00000248668 Q5VV11 94 aa9.6□□□□□ -0.87
LRFN1-201ENST00000248668 LINC00208Q96KT6 92 aa9.57□□□□□ -0.88
LRFN1-201ENST00000248668 DNAH11Q96DT5 4516 aa9.55□□□□□ -0.88
LRFN1-201ENST00000248668 ZCCHC13Q8WW36 166 aaKnown RBP9.55□□□□□ -0.88
LRFN1-201ENST00000248668 MOBPQ13875 183 aa9.53□□□□□ -0.88
LRFN1-201ENST00000248668 HYDINQ4G0P3 5121 aa9.53□□□□□ -0.88
LRFN1-201ENST00000248668 KRTAP10-2P60368 255 aa9.52□□□□□ -0.88
LRFN1-201ENST00000248668 PLAC8Q9NZF1 115 aa9.52□□□□□ -0.88
LRFN1-201ENST00000248668 LCE6AA0A183 80 aa9.51□□□□□ -0.89
LRFN1-201ENST00000248668 DNAH5Q8TE73 4624 aa9.51□□□□□ -0.89
LRFN1-201ENST00000248668 LCA10Q71F78 164 aa9.5□□□□□ -0.89
LRFN1-201ENST00000248668 LINC00472Q9H8W2 130 aa9.5□□□□□ -0.89
LRFN1-201ENST00000248668 ZNF861PO60384 105 aa9.49□□□□□ -0.89
LRFN1-201ENST00000248668 MP68P56378 58 aa9.49□□□□□ -0.89
LRFN1-201ENST00000248668 PRAC1Q96KF2 57 aa9.47□□□□□ -0.89
LRFN1-201ENST00000248668 WWC2-AS2Q96NR7 200 aa9.47□□□□□ -0.89
LRFN1-201ENST00000248668 C8orf87E5RJ46 101 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms