RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 RBM3P98179 157 aaKnown RBP6.04□□□□□ -1.44
TTC1-201ENST00000231238 C1orf137Q5JT78 98 aa6.04□□□□□ -1.44
TTC1-201ENST00000231238 GAGE2AQ6NT46 116 aa6.04□□□□□ -1.44
TTC1-201ENST00000231238 KRTAP11-1Q8IUC1 163 aa6.04□□□□□ -1.44
TTC1-201ENST00000231238 DSCR8Q96T75 97 aa6.04□□□□□ -1.44
TTC1-201ENST00000231238 F8WEM9 126 aa6.03□□□□□ -1.44
TTC1-201ENST00000231238 H0Y9J4 135 aa6.03□□□□□ -1.44
TTC1-201ENST00000231238 NDUFV3P56181 108 aaKnown RBP6.03□□□□□ -1.44
TTC1-201ENST00000231238 CIRBP-AS1Q8TBR5 109 aa6.03□□□□□ -1.44
TTC1-201ENST00000231238 PSORS1C2Q9UIG4 136 aa6.03□□□□□ -1.44
TTC1-201ENST00000231238 HECTD4Q9Y4D8 3996 aa6.03□□□□□ -1.44
TTC1-201ENST00000231238 ERC2-IT1O76042 136 aa6.02□□□□□ -1.44
TTC1-201ENST00000231238 SCXQ7RTU7 201 aa6.02□□□□□ -1.44
TTC1-201ENST00000231238 ST20-AS1Q8NBB2 130 aa6.02□□□□□ -1.44
TTC1-201ENST00000231238 HAMPP81172 84 aa6.02□□□□□ -1.45
TTC1-201ENST00000231238 KRTAP9-8Q9BYQ0 159 aa6.02□□□□□ -1.45
TTC1-201ENST00000231238 HYDINQ4G0P3 5121 aa6.01□□□□□ -1.45
TTC1-201ENST00000231238 PDE6GP18545 87 aa6□□□□□ -1.45
TTC1-201ENST00000231238 Q6ZSA8 131 aa6□□□□□ -1.45
TTC1-201ENST00000231238 Q8N377 158 aa6□□□□□ -1.45
TTC1-201ENST00000231238 ZNF706Q9Y5V0 76 aaPredicted RBP6□□□□□ -1.45
TTC1-201ENST00000231238 FRAS1Q86XX4 4008 aa5.99□□□□□ -1.45
TTC1-201ENST00000231238 ACYP1P07311 99 aa5.99□□□□□ -1.45
TTC1-201ENST00000231238 OBSCN-AS1Q96MR7 158 aa5.99□□□□□ -1.45
TTC1-201ENST00000231238 IGLV5-48A0A075B6I7 105 aa5.98□□□□□ -1.45
TTC1-201ENST00000231238 C3orf22Q8N5N4 141 aa5.98□□□□□ -1.45
TTC1-201ENST00000231238 Q8N9P0 234 aaPredicted RBP5.98□□□□□ -1.45
TTC1-201ENST00000231238 FAM240AA0A1B0GVK7 77 aa5.97□□□□□ -1.45
TTC1-201ENST00000231238 ZNF861PO60384 105 aa5.97□□□□□ -1.45
TTC1-201ENST00000231238 CCKP06307 115 aa5.97□□□□□ -1.45
TTC1-201ENST00000231238 SACSQ9NZJ4 4579 aa5.97□□□□□ -1.45
TTC1-201ENST00000231238 IGLV7-43P04211 117 aa5.96□□□□□ -1.45
TTC1-201ENST00000231238 LINC01547P58512 204 aaPredicted RBP5.96□□□□□ -1.45
TTC1-201ENST00000231238 LOC110117498A0A087WWA1 95 aa5.96□□□□□ -1.46
TTC1-201ENST00000231238 A0A1B0GVY2 172 aa5.96□□□□□ -1.46
TTC1-201ENST00000231238 KRTAP13-1Q8IUC0 172 aa5.96□□□□□ -1.46
TTC1-201ENST00000231238 Q6ZQT0 140 aa5.95□□□□□ -1.46
TTC1-201ENST00000231238 FAT2Q9NYQ8 4349 aa5.94□□□□□ -1.46
TTC1-201ENST00000231238 DNAH11Q96DT5 4516 aa5.94□□□□□ -1.46
TTC1-201ENST00000231238 TRBV7-4A0A0J9YYF1 115 aa5.93□□□□□ -1.46
TTC1-201ENST00000231238 C9orf153Q5TBE3 101 aa5.93□□□□□ -1.46
TTC1-201ENST00000231238 SPRR4Q96PI1 79 aa5.93□□□□□ -1.46
TTC1-201ENST00000231238 LCE1AQ5T7P2 110 aa5.92□□□□□ -1.46
TTC1-201ENST00000231238 UBL5Q9BZL1 73 aa5.92□□□□□ -1.46
TTC1-201ENST00000231238 IGLV9-49A0A0B4J1Y8 123 aa5.91□□□□□ -1.46
TTC1-201ENST00000231238 SPRR1BP22528 89 aa5.91□□□□□ -1.46
TTC1-201ENST00000231238 RPL37AP61513 92 aaKnown RBP5.91□□□□□ -1.46
TTC1-201ENST00000231238 SMIM29Q86T20 159 aa5.91□□□□□ -1.46
TTC1-201ENST00000231238 SIGMAR1Q99720 223 aa5.91□□□□□ -1.46
TTC1-201ENST00000231238 PKD1P98161 4303 aa5.91□□□□□ -1.46
TTC1-201ENST00000231238 RYR2Q92736 4967 aa5.91□□□□□ -1.46
TTC1-201ENST00000231238 DNAH5Q8TE73 4624 aa5.9□□□□□ -1.46
TTC1-201ENST00000231238 IGKV2-30P06310 120 aa5.9□□□□□ -1.46
TTC1-201ENST00000231238 Q6JHZ5 121 aa5.9□□□□□ -1.46
TTC1-201ENST00000231238 SMR3BP02814 79 aaPredicted RBP5.9□□□□□ -1.47
TTC1-201ENST00000231238 LINC00846Q9NV44 126 aa5.9□□□□□ -1.47
TTC1-201ENST00000231238 LINC00643Q86TS7 51 aa5.89□□□□□ -1.47
TTC1-201ENST00000231238 XGP55808 180 aa5.87□□□□□ -1.47
TTC1-201ENST00000231238 LINC00483Q53H64 154 aa5.87□□□□□ -1.47
TTC1-201ENST00000231238 IGFL1Q6UW32 110 aa5.87□□□□□ -1.47
TTC1-201ENST00000231238 Q8NBF4 154 aa5.87□□□□□ -1.47
TTC1-201ENST00000231238 DNAH8Q96JB1 4490 aa5.87□□□□□ -1.47
TTC1-201ENST00000231238 IGLV8-61A0A075B6I0 122 aa5.86□□□□□ -1.47
TTC1-201ENST00000231238 MT-ATP8P03928 68 aa5.86□□□□□ -1.47
TTC1-201ENST00000231238 MOBPQ13875 183 aa5.86□□□□□ -1.47
TTC1-201ENST00000231238 NREPQ16612 68 aa5.86□□□□□ -1.47
TTC1-201ENST00000231238 ANAPC11Q9NYG5 84 aa5.86□□□□□ -1.47
TTC1-201ENST00000231238 KMT2CQ8NEZ4 4911 aaKnown RBP5.85□□□□□ -1.47
TTC1-201ENST00000231238 A0A1B0GW54 56 aa5.85□□□□□ -1.47
TTC1-201ENST00000231238 A0A0G2JQZ4 141 aa5.84□□□□□ -1.47
TTC1-201ENST00000231238 A0A1W2PNM2 257 aa5.84□□□□□ -1.47
TTC1-201ENST00000231238 IGKV3D-7A0A0C4DH55 119 aa5.83□□□□□ -1.48
TTC1-201ENST00000231238 Q6ZVQ6 151 aa5.83□□□□□ -1.48
TTC1-201ENST00000231238 SRRM2Q9UQ35 2752 aaKnown RBP5.83□□□□□ -1.48
TTC1-201ENST00000231238 ATP5EP2Q5VTU8 51 aa5.83□□□□□ -1.48
TTC1-201ENST00000231238 CRYGAP11844 174 aa5.82□□□□□ -1.48
TTC1-201ENST00000231238 SPINK6Q6UWN8 80 aa5.82□□□□□ -1.48
TTC1-201ENST00000231238 HRCT1Q6UXD1 115 aa5.82□□□□□ -1.48
TTC1-201ENST00000231238 A0A087WSZ3 146 aa5.81□□□□□ -1.48
TTC1-201ENST00000231238 HIST1H4AP62805 103 aaKnown RBP5.8□□□□□ -1.48
TTC1-201ENST00000231238 FAM229BQ4G0N7 80 aa5.8□□□□□ -1.48
TTC1-201ENST00000231238 PKHD1P08F94 4074 aa5.8□□□□□ -1.48
TTC1-201ENST00000231238 BPY2O14599 106 aa5.79□□□□□ -1.48
TTC1-201ENST00000231238 LRP1BQ9NZR2 4599 aa5.79□□□□□ -1.48
TTC1-201ENST00000231238 DYNC1H1Q14204 4646 aaKnown RBP5.79□□□□□ -1.48
TTC1-201ENST00000231238 SSBP3-AS1Q7Z2R9 100 aa5.78□□□□□ -1.48
TTC1-201ENST00000231238 KRTAP29-1A8MX34 341 aaPredicted RBP5.77□□□□□ -1.49
TTC1-201ENST00000231238 CDK2AP2O75956 126 aa5.77□□□□□ -1.49
TTC1-201ENST00000231238 Q6Q795 121 aa5.77□□□□□ -1.49
TTC1-201ENST00000231238 IMUPQ9GZP8 106 aa5.77□□□□□ -1.49
TTC1-201ENST00000231238 SS18L2Q9UHA2 77 aa5.77□□□□□ -1.49
TTC1-201ENST00000231238 TRBV7-7A0A0K0K1E9 115 aa5.77□□□□□ -1.49
TTC1-201ENST00000231238 CXCL6P80162 114 aa5.77□□□□□ -1.49
TTC1-201ENST00000231238 TYMSOSQ8TAI1 123 aa5.76□□□□□ -1.49
TTC1-201ENST00000231238 A0A087X002 238 aa5.75□□□□□ -1.49
TTC1-201ENST00000231238 SCGB1A1P11684 91 aa5.75□□□□□ -1.49
TTC1-201ENST00000231238 MPLKIPQ8TAP9 179 aa5.74□□□□□ -1.49
TTC1-201ENST00000231238 KRTAP1-4P0C5Y4 121 aa5.73□□□□□ -1.49
TTC1-201ENST00000231238 RYR3Q15413 4870 aa5.73□□□□□ -1.49
TTC1-201ENST00000231238 DEFB116Q30KQ4 102 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms