RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 Q9BRP9 147 aa13.15□□□□□ -0.31
SNX3-201ENST00000230085 C1orf137Q5JT78 98 aa13.14□□□□□ -0.31
SNX3-201ENST00000230085 HIGD2AQ9BW72 106 aa13.12□□□□□ -0.31
SNX3-201ENST00000230085 RYR2Q92736 4967 aa13.11□□□□□ -0.31
SNX3-201ENST00000230085 DNAH6Q9C0G6 4158 aa13.11□□□□□ -0.31
SNX3-201ENST00000230085 IGKV2D-24A0A075B6R9 120 aa13.11□□□□□ -0.31
SNX3-201ENST00000230085 SMIM29Q86T20 159 aa13.11□□□□□ -0.31
SNX3-201ENST00000230085 RYR3Q15413 4870 aa13.09□□□□□ -0.31
SNX3-201ENST00000230085 DSCR10P59022 87 aa13.09□□□□□ -0.31
SNX3-201ENST00000230085 ETDCA0A1B0GVM5 59 aa13.08□□□□□ -0.32
SNX3-201ENST00000230085 hDV103S1A0JD37 113 aa13.08□□□□□ -0.32
SNX3-201ENST00000230085 FAM229BQ4G0N7 80 aa13.08□□□□□ -0.32
SNX3-201ENST00000230085 DEFB105AQ8NG35 78 aa13.08□□□□□ -0.32
SNX3-201ENST00000230085 NBDYA0A0U1RRE5 68 aa13.07□□□□□ -0.32
SNX3-201ENST00000230085 KRTAP1-5Q9BYS1 174 aa13.07□□□□□ -0.32
SNX3-201ENST00000230085 Q6ZR54 194 aa13.05□□□□□ -0.32
SNX3-201ENST00000230085 CYP4F30PQ9H0H9 118 aa13.04□□□□□ -0.32
SNX3-201ENST00000230085 KRTAP7-1Q8IUC3 87 aa13.02□□□□□ -0.32
SNX3-201ENST00000230085 DNAH2Q9P225 4427 aa13.02□□□□□ -0.33
SNX3-201ENST00000230085 IGLV8-61A0A075B6I0 122 aa13.02□□□□□ -0.33
SNX3-201ENST00000230085 FAM30AQ9NZY2 134 aa13.02□□□□□ -0.33
SNX3-201ENST00000230085 Q1T7F1 81 aa13.01□□□□□ -0.33
SNX3-201ENST00000230085 MRPL55Q7Z7F7 128 aaKnown RBP12.99□□□□□ -0.33
SNX3-201ENST00000230085 ST20-AS1Q8NBB2 130 aa12.99□□□□□ -0.33
SNX3-201ENST00000230085 DNAH10Q8IVF4 4471 aa12.98□□□□□ -0.33
SNX3-201ENST00000230085 HCG22E2RYF7 251 aa12.98□□□□□ -0.33
SNX3-201ENST00000230085 NDUFB1O75438 58 aa12.97□□□□□ -0.33
SNX3-201ENST00000230085 FRAS1Q86XX4 4008 aa12.97□□□□□ -0.33
SNX3-201ENST00000230085 RPL37AP8A6NKH3 93 aa12.97□□□□□ -0.33
SNX3-201ENST00000230085 K7EQZ3 153 aa12.97□□□□□ -0.33
SNX3-201ENST00000230085 FAM168BA1KXE4 195 aa12.94□□□□□ -0.34
SNX3-201ENST00000230085 C1orf134Q5TEV5 83 aa12.94□□□□□ -0.34
SNX3-201ENST00000230085 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.94□□□□□ -0.34
SNX3-201ENST00000230085 REG3GQ6UW15 175 aa12.93□□□□□ -0.34
SNX3-201ENST00000230085 C1orf64Q8NEQ6 169 aa12.92□□□□□ -0.34
SNX3-201ENST00000230085 BRK1Q8WUW1 75 aa12.92□□□□□ -0.34
SNX3-201ENST00000230085 MPLKIPQ8TAP9 179 aa12.92□□□□□ -0.34
SNX3-201ENST00000230085 RTL8CO15255 209 aa12.9□□□□□ -0.34
SNX3-201ENST00000230085 H3BPC8 53 aa12.89□□□□□ -0.35
SNX3-201ENST00000230085 PSCAO43653 123 aa12.89□□□□□ -0.35
SNX3-201ENST00000230085 UBE2BP63146 152 aa12.89□□□□□ -0.35
SNX3-201ENST00000230085 IGFL1Q6UW32 110 aa12.88□□□□□ -0.35
SNX3-201ENST00000230085 Q6ZRN7 208 aaPredicted RBP12.88□□□□□ -0.35
SNX3-201ENST00000230085 DNAH17Q9UFH2 4485 aa12.86□□□□□ -0.35
SNX3-201ENST00000230085 FAT2Q9NYQ8 4349 aa12.86□□□□□ -0.35
SNX3-201ENST00000230085 KRTAP29-1A8MX34 341 aaPredicted RBP12.85□□□□□ -0.35
SNX3-201ENST00000230085 PRR15Q8IV56 129 aa12.84□□□□□ -0.35
SNX3-201ENST00000230085 SPANXA2-OT1Q8N9U9 137 aa12.84□□□□□ -0.35
SNX3-201ENST00000230085 V9GYY9 64 aa12.83□□□□□ -0.36
SNX3-201ENST00000230085 SPRR1BP22528 89 aa12.82□□□□□ -0.36
SNX3-201ENST00000230085 MP68P56378 58 aa12.82□□□□□ -0.36
SNX3-201ENST00000230085 TRAV22A0A0B4J277 110 aa12.81□□□□□ -0.36
SNX3-201ENST00000230085 H0Y9J4 135 aa12.8□□□□□ -0.36
SNX3-201ENST00000230085 C1orf195Q5TG92 126 aa12.79□□□□□ -0.36
SNX3-201ENST00000230085 C16orf90A8MZG2 172 aa12.78□□□□□ -0.36
SNX3-201ENST00000230085 CNBPP62633 177 aaKnown RBP12.78□□□□□ -0.36
SNX3-201ENST00000230085 PKIGQ9Y2B9 76 aa12.78□□□□□ -0.36
SNX3-201ENST00000230085 LRCOL1A6NCL2 159 aa12.74□□□□□ -0.37
SNX3-201ENST00000230085 A0A087WSZ3 146 aa12.73□□□□□ -0.37
SNX3-201ENST00000230085 PKD1P98161 4303 aa12.72□□□□□ -0.37
SNX3-201ENST00000230085 A0A087WTM6 91 aa12.72□□□□□ -0.37
SNX3-201ENST00000230085 DNAH11Q96DT5 4516 aa12.71□□□□□ -0.38
SNX3-201ENST00000230085 A8MWP4 228 aa12.7□□□□□ -0.38
SNX3-201ENST00000230085 LINC00472Q9H8W2 130 aa12.7□□□□□ -0.38
SNX3-201ENST00000230085 A0A096LNI7 61 aa12.68□□□□□ -0.38
SNX3-201ENST00000230085 A0A1B0GVY2 172 aa12.68□□□□□ -0.38
SNX3-201ENST00000230085 WFDC13Q8IUB5 93 aa12.68□□□□□ -0.38
SNX3-201ENST00000230085 PKHD1P08F94 4074 aa12.68□□□□□ -0.38
SNX3-201ENST00000230085 HECTD4Q9Y4D8 3996 aa12.67□□□□□ -0.38
SNX3-201ENST00000230085 CASC2Q6XLA1 102 aa12.67□□□□□ -0.38
SNX3-201ENST00000230085 UBE2AP49459 152 aa12.66□□□□□ -0.38
SNX3-201ENST00000230085 PRLHP81277 87 aa12.66□□□□□ -0.38
SNX3-201ENST00000230085 C9orf163Q8N9P6 203 aa12.66□□□□□ -0.38
SNX3-201ENST00000230085 H0Y9P7 68 aa12.65□□□□□ -0.38
SNX3-201ENST00000230085 LINC00208Q96KT6 92 aa12.65□□□□□ -0.38
SNX3-201ENST00000230085 A0A1W2PNN7 141 aa12.64□□□□□ -0.39
SNX3-201ENST00000230085 KRTAP10-2P60368 255 aa12.64□□□□□ -0.39
SNX3-201ENST00000230085 EPPK1P58107 5090 aaKnown RBP12.63□□□□□ -0.39
SNX3-201ENST00000230085 A0A0G2JQZ4 141 aa12.61□□□□□ -0.39
SNX3-201ENST00000230085 LIMD2Q9BT23 127 aa12.61□□□□□ -0.39
SNX3-201ENST00000230085 C14orf177Q52M58 125 aa12.6□□□□□ -0.39
SNX3-201ENST00000230085 DEFB116Q30KQ4 102 aa12.59□□□□□ -0.39
SNX3-201ENST00000230085 DNAH5Q8TE73 4624 aa12.59□□□□□ -0.39
SNX3-201ENST00000230085 ASB16-AS1Q495Z4 193 aa12.58□□□□□ -0.39
SNX3-201ENST00000230085 RPL37AP61513 92 aaKnown RBP12.56□□□□□ -0.4
SNX3-201ENST00000230085 Q5VV11 94 aa12.56□□□□□ -0.4
SNX3-201ENST00000230085 Q8N9P0 234 aaPredicted RBP12.56□□□□□ -0.4
SNX3-201ENST00000230085 PSPHP1O15172 72 aa12.55□□□□□ -0.4
SNX3-201ENST00000230085 MMP24-AS1A0A0U1RRL7 71 aa12.54□□□□□ -0.4
SNX3-201ENST00000230085 PRR4Q16378 134 aa12.54□□□□□ -0.4
SNX3-201ENST00000230085 IGLV5-52A0A0A0MRZ9 124 aa12.53□□□□□ -0.4
SNX3-201ENST00000230085 IGLV7-46A0A075B6I9 117 aa12.53□□□□□ -0.4
SNX3-201ENST00000230085 A8MUN3 132 aa12.53□□□□□ -0.4
SNX3-201ENST00000230085 TP53AIP1Q9HCN2 124 aa12.52□□□□□ -0.41
SNX3-201ENST00000230085 IGKV2-24A0A0C4DH68 120 aa12.51□□□□□ -0.41
SNX3-201ENST00000230085 KRTAP13-1Q8IUC0 172 aa12.51□□□□□ -0.41
SNX3-201ENST00000230085 PMAIP1Q13794 54 aa12.51□□□□□ -0.41
SNX3-201ENST00000230085 LOC101927531A0A1B0GV80 90 aa12.5□□□□□ -0.41
SNX3-201ENST00000230085 KRTAP11-1Q8IUC1 163 aa12.49□□□□□ -0.41
SNX3-201ENST00000230085 MOBPQ13875 183 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms