RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 DNAH17Q9UFH2 4485 aa9.34□□□□□ -0.91
CCDC47-201ENST00000225726 SCXQ7RTU7 201 aa9.32□□□□□ -0.92
CCDC47-201ENST00000225726 HECTD4Q9Y4D8 3996 aa9.32□□□□□ -0.92
CCDC47-201ENST00000225726 F8WEM9 126 aa9.32□□□□□ -0.92
CCDC47-201ENST00000225726 KRTAP11-1Q8IUC1 163 aa9.31□□□□□ -0.92
CCDC47-201ENST00000225726 HAMPP81172 84 aa9.3□□□□□ -0.92
CCDC47-201ENST00000225726 CCKP06307 115 aa9.3□□□□□ -0.92
CCDC47-201ENST00000225726 LINC01547P58512 204 aaPredicted RBP9.29□□□□□ -0.92
CCDC47-201ENST00000225726 LOC110117498A0A087WWA1 95 aa9.29□□□□□ -0.92
CCDC47-201ENST00000225726 FP248Q71RG6 208 aaPredicted RBP9.29□□□□□ -0.92
CCDC47-201ENST00000225726 ERC2-IT1O76042 136 aa9.28□□□□□ -0.92
CCDC47-201ENST00000225726 Q8N377 158 aa9.28□□□□□ -0.92
CCDC47-201ENST00000225726 DEFB105AQ8NG35 78 aa9.28□□□□□ -0.92
CCDC47-201ENST00000225726 FRAS1Q86XX4 4008 aa9.28□□□□□ -0.92
CCDC47-201ENST00000225726 PLAC8Q9NZF1 115 aa9.28□□□□□ -0.92
CCDC47-201ENST00000225726 IGLV5-48A0A075B6I7 105 aa9.27□□□□□ -0.93
CCDC47-201ENST00000225726 H0Y9J4 135 aa9.27□□□□□ -0.93
CCDC47-201ENST00000225726 PRLHP81277 87 aa9.27□□□□□ -0.93
CCDC47-201ENST00000225726 Q6ZQT0 140 aa9.26□□□□□ -0.93
CCDC47-201ENST00000225726 PDE6GP18545 87 aa9.26□□□□□ -0.93
CCDC47-201ENST00000225726 ST20-AS1Q8NBB2 130 aa9.26□□□□□ -0.93
CCDC47-201ENST00000225726 KRTAP10-2P60368 255 aa9.25□□□□□ -0.93
CCDC47-201ENST00000225726 BCE1O60756 84 aa9.25□□□□□ -0.93
CCDC47-201ENST00000225726 TRBV7-4A0A0J9YYF1 115 aa9.24□□□□□ -0.93
CCDC47-201ENST00000225726 UBE2AP49459 152 aa9.23□□□□□ -0.93
CCDC47-201ENST00000225726 HIGD2AQ9BW72 106 aa9.22□□□□□ -0.93
CCDC47-201ENST00000225726 LCE6AA0A183 80 aa9.22□□□□□ -0.93
CCDC47-201ENST00000225726 FAM229BQ4G0N7 80 aa9.22□□□□□ -0.93
CCDC47-201ENST00000225726 PRR4Q16378 134 aa9.21□□□□□ -0.93
CCDC47-201ENST00000225726 SERP1Q9Y6X1 66 aa9.21□□□□□ -0.94
CCDC47-201ENST00000225726 PSPHP1O15172 72 aa9.21□□□□□ -0.94
CCDC47-201ENST00000225726 KRTAP13-1Q8IUC0 172 aa9.2□□□□□ -0.94
CCDC47-201ENST00000225726 SMIM26A0A096LP01 95 aa9.2□□□□□ -0.94
CCDC47-201ENST00000225726 HYDINQ4G0P3 5121 aa9.2□□□□□ -0.94
CCDC47-201ENST00000225726 H7BZZ5 65 aa9.18□□□□□ -0.94
CCDC47-201ENST00000225726 DNAH11Q96DT5 4516 aa9.18□□□□□ -0.94
CCDC47-201ENST00000225726 Q6JHZ5 121 aa9.17□□□□□ -0.94
CCDC47-201ENST00000225726 SMIM29Q86T20 159 aa9.16□□□□□ -0.94
CCDC47-201ENST00000225726 PSORS1C2Q9UIG4 136 aa9.16□□□□□ -0.94
CCDC47-201ENST00000225726 PMAIP1Q13794 54 aa9.15□□□□□ -0.94
CCDC47-201ENST00000225726 FAM30AQ9NZY2 134 aa9.15□□□□□ -0.94
CCDC47-201ENST00000225726 FAT2Q9NYQ8 4349 aa9.15□□□□□ -0.95
CCDC47-201ENST00000225726 SPRR1BP22528 89 aa9.14□□□□□ -0.95
CCDC47-201ENST00000225726 Q6ZSA8 131 aa9.14□□□□□ -0.95
CCDC47-201ENST00000225726 KRTAP10-1P60331 282 aa9.14□□□□□ -0.95
CCDC47-201ENST00000225726 DNAH5Q8TE73 4624 aa9.13□□□□□ -0.95
CCDC47-201ENST00000225726 SACSQ9NZJ4 4579 aa9.13□□□□□ -0.95
CCDC47-201ENST00000225726 Q8N9L7 120 aa9.12□□□□□ -0.95
CCDC47-201ENST00000225726 CIRBP-AS1Q8TBR5 109 aa9.12□□□□□ -0.95
CCDC47-201ENST00000225726 UBL5Q9BZL1 73 aa9.12□□□□□ -0.95
CCDC47-201ENST00000225726 PKD1P98161 4303 aa9.12□□□□□ -0.95
CCDC47-201ENST00000225726 C1orf137Q5JT78 98 aa9.12□□□□□ -0.95
CCDC47-201ENST00000225726 SPTSSBQ8NFR3 76 aa9.12□□□□□ -0.95
CCDC47-201ENST00000225726 DNAH8Q96JB1 4490 aa9.11□□□□□ -0.95
CCDC47-201ENST00000225726 A8MU10 97 aa9.1□□□□□ -0.95
CCDC47-201ENST00000225726 IGLV8-61A0A075B6I0 122 aa9.1□□□□□ -0.95
CCDC47-201ENST00000225726 ZNF861PO60384 105 aa9.08□□□□□ -0.96
CCDC47-201ENST00000225726 ATP5EP2Q5VTU8 51 aa9.08□□□□□ -0.96
CCDC47-201ENST00000225726 A0A1B0GW54 56 aa9.07□□□□□ -0.96
CCDC47-201ENST00000225726 ZNF706Q9Y5V0 76 aaPredicted RBP9.07□□□□□ -0.96
CCDC47-201ENST00000225726 A0A1W2PNM2 257 aa9.07□□□□□ -0.96
CCDC47-201ENST00000225726 Q6ZVQ6 151 aa9.07□□□□□ -0.96
CCDC47-201ENST00000225726 Q8NBF4 154 aa9.06□□□□□ -0.96
CCDC47-201ENST00000225726 SPRR4Q96PI1 79 aa9.06□□□□□ -0.96
CCDC47-201ENST00000225726 IGLV7-43P04211 117 aa9.06□□□□□ -0.96
CCDC47-201ENST00000225726 LINC00483Q53H64 154 aa9.04□□□□□ -0.96
CCDC47-201ENST00000225726 IGFL1Q6UW32 110 aa9.04□□□□□ -0.96
CCDC47-201ENST00000225726 A0A1B0GVY2 172 aa9.01□□□□□ -0.97
CCDC47-201ENST00000225726 TRAV7A0A075B6U4 112 aa9.01□□□□□ -0.97
CCDC47-201ENST00000225726 NREPQ16612 68 aa8.99□□□□□ -0.97
CCDC47-201ENST00000225726 CXCL6P80162 114 aa8.99□□□□□ -0.97
CCDC47-201ENST00000225726 A0A0G2JQZ4 141 aa8.98□□□□□ -0.97
CCDC47-201ENST00000225726 RYR2Q92736 4967 aa8.96□□□□□ -0.98
CCDC47-201ENST00000225726 SRRM2Q9UQ35 2752 aaKnown RBP8.95□□□□□ -0.98
CCDC47-201ENST00000225726 TMEM254Q8TBM7 123 aa8.95□□□□□ -0.98
CCDC47-201ENST00000225726 IGLV9-49A0A0B4J1Y8 123 aa8.95□□□□□ -0.98
CCDC47-201ENST00000225726 RPL37AP61513 92 aaKnown RBP8.95□□□□□ -0.98
CCDC47-201ENST00000225726 BPY2O14599 106 aa8.91□□□□□ -0.98
CCDC47-201ENST00000225726 ANAPC11Q9NYG5 84 aa8.91□□□□□ -0.98
CCDC47-201ENST00000225726 A0A087WSZ3 146 aa8.9□□□□□ -0.98
CCDC47-201ENST00000225726 A8MUN3 132 aa8.9□□□□□ -0.98
CCDC47-201ENST00000225726 KLKP1Q107X0 134 aa8.9□□□□□ -0.99
CCDC47-201ENST00000225726 MOBPQ13875 183 aa8.89□□□□□ -0.99
CCDC47-201ENST00000225726 C4orf48Q5BLP8 95 aa8.89□□□□□ -0.99
CCDC47-201ENST00000225726 LRP1BQ9NZR2 4599 aa8.87□□□□□ -0.99
CCDC47-201ENST00000225726 PKHD1P08F94 4074 aa8.87□□□□□ -0.99
CCDC47-201ENST00000225726 RBM12B-AS1Q9P1G2 102 aa8.86□□□□□ -0.99
CCDC47-201ENST00000225726 KMT2CQ8NEZ4 4911 aaKnown RBP8.85□□□□□ -0.99
CCDC47-201ENST00000225726 CHKB-CPT1BH3BT56 60 aa8.84□□□□□ -0.99
CCDC47-201ENST00000225726 DYNC1H1Q14204 4646 aaKnown RBP8.84□□□□□ -0.99
CCDC47-201ENST00000225726 IGKV4-1P06312 121 aa8.84□□□□□ -0.99
CCDC47-201ENST00000225726 CD164Q04900 197 aa8.84□□□□□ -1
CCDC47-201ENST00000225726 DEFB116Q30KQ4 102 aa8.81□□□□□ -1
CCDC47-201ENST00000225726 SSBP3-AS1Q7Z2R9 100 aa8.81□□□□□ -1
CCDC47-201ENST00000225726 DSCR10P59022 87 aa8.81□□□□□ -1
CCDC47-201ENST00000225726 TRAV22A0A0B4J277 110 aa8.79□□□□□ -1
CCDC47-201ENST00000225726 C1orf64Q8NEQ6 169 aa8.79□□□□□ -1
CCDC47-201ENST00000225726 H3BS24 57 aa8.79□□□□□ -1
CCDC47-201ENST00000225726 SPINK6Q6UWN8 80 aa8.78□□□□□ -1
CCDC47-201ENST00000225726 LINC00472Q9H8W2 130 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms