RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 WFDC10BQ8IUB3 73 aa8.8□□□□□ -1
GABPB1-201ENST00000220429 HUWE1Q7Z6Z7 4374 aaKnown RBP8.79□□□□□ -1
GABPB1-201ENST00000220429 LINC00528Q8N1L1 170 aa8.79□□□□□ -1
GABPB1-201ENST00000220429 COL6A5A8TX70 2615 aa8.79□□□□□ -1
GABPB1-201ENST00000220429 COA5Q86WW8 74 aa8.79□□□□□ -1
GABPB1-201ENST00000220429 CYSRT1A8MQ03 144 aa8.78□□□□□ -1
GABPB1-201ENST00000220429 IGLV5-48A0A075B6I7 105 aa8.77□□□□□ -1.01
GABPB1-201ENST00000220429 A0A0J9YWU9 116 aa8.77□□□□□ -1.01
GABPB1-201ENST00000220429 CASC2Q6XLA1 102 aa8.77□□□□□ -1.01
GABPB1-201ENST00000220429 BAHCC1Q9P281 2608 aa8.77□□□□□ -1.01
GABPB1-201ENST00000220429 A0A1W2PNM2 257 aa8.76□□□□□ -1.01
GABPB1-201ENST00000220429 SERTAD4-AS1Q5TG53 156 aa8.76□□□□□ -1.01
GABPB1-201ENST00000220429 LINC01558Q9Y6Z2 57 aa8.76□□□□□ -1.01
GABPB1-201ENST00000220429 NBEAL1Q6ZS30 2694 aa8.76□□□□□ -1.01
GABPB1-201ENST00000220429 SPINK7P58062 85 aa8.76□□□□□ -1.01
GABPB1-201ENST00000220429 XAGE1AQ9HD64 81 aa8.75□□□□□ -1.01
GABPB1-201ENST00000220429 DEFB116Q30KQ4 102 aa8.74□□□□□ -1.01
GABPB1-201ENST00000220429 PLAC8Q9NZF1 115 aa8.74□□□□□ -1.01
GABPB1-201ENST00000220429 DEFB105AQ8NG35 78 aa8.74□□□□□ -1.01
GABPB1-201ENST00000220429 DNAH1Q9P2D7 4330 aa8.74□□□□□ -1.01
GABPB1-201ENST00000220429 KRTAP26-1Q6PEX3 210 aa8.74□□□□□ -1.01
GABPB1-201ENST00000220429 DEFB131BA0A096LNP1 70 aa8.73□□□□□ -1.01
GABPB1-201ENST00000220429 H3BPC8 53 aa8.73□□□□□ -1.01
GABPB1-201ENST00000220429 ADM2Q7Z4H4 148 aa8.73□□□□□ -1.01
GABPB1-201ENST00000220429 GVQW2A0A096LPI5 108 aaPredicted RBP8.73□□□□□ -1.01
GABPB1-201ENST00000220429 SPAG11AQ6PDA7 123 aa8.73□□□□□ -1.01
GABPB1-201ENST00000220429 C6orf48Q9UBA6 75 aa8.73□□□□□ -1.01
GABPB1-201ENST00000220429 Q8N377 158 aa8.72□□□□□ -1.01
GABPB1-201ENST00000220429 H0Y9P7 68 aa8.72□□□□□ -1.01
GABPB1-201ENST00000220429 PLA2G1BP04054 148 aaKnown RBP8.71□□□□□ -1.01
GABPB1-201ENST00000220429 WFDC13Q8IUB5 93 aa8.71□□□□□ -1.01
GABPB1-201ENST00000220429 C9orf163Q8N9P6 203 aa8.71□□□□□ -1.02
GABPB1-201ENST00000220429 Q8NBF4 154 aa8.7□□□□□ -1.02
GABPB1-201ENST00000220429 C1orf137Q5JT78 98 aa8.69□□□□□ -1.02
GABPB1-201ENST00000220429 IGKV2D-24A0A075B6R9 120 aa8.69□□□□□ -1.02
GABPB1-201ENST00000220429 LINC01556Q5JQF7 62 aa8.68□□□□□ -1.02
GABPB1-201ENST00000220429 C15orf56Q8N910 161 aa8.68□□□□□ -1.02
GABPB1-201ENST00000220429 SPRR4Q96PI1 79 aa8.68□□□□□ -1.02
GABPB1-201ENST00000220429 CNBPP62633 177 aaKnown RBP8.67□□□□□ -1.02
GABPB1-201ENST00000220429 CAMK2N2Q96S95 79 aa8.67□□□□□ -1.02
GABPB1-201ENST00000220429 IGLV7-46A0A075B6I9 117 aa8.66□□□□□ -1.02
GABPB1-201ENST00000220429 DNAH9Q9NYC9 4486 aa8.64□□□□□ -1.03
GABPB1-201ENST00000220429 MGAM2Q2M2H8 2515 aa8.63□□□□□ -1.03
GABPB1-201ENST00000220429 K7EIL1 84 aa8.63□□□□□ -1.03
GABPB1-201ENST00000220429 TNP2Q05952 138 aa8.63□□□□□ -1.03
GABPB1-201ENST00000220429 C7orf33Q8WU49 177 aa8.62□□□□□ -1.03
GABPB1-201ENST00000220429 DNAH10OSP0CZ25 163 aa8.62□□□□□ -1.03
GABPB1-201ENST00000220429 ASB16-AS1Q495Z4 193 aa8.62□□□□□ -1.03
GABPB1-201ENST00000220429 LYSTQ99698 3801 aa8.61□□□□□ -1.03
GABPB1-201ENST00000220429 KRTAP29-1A8MX34 341 aaPredicted RBP8.6□□□□□ -1.03
GABPB1-201ENST00000220429 DNAH10Q8IVF4 4471 aa8.6□□□□□ -1.03
GABPB1-201ENST00000220429 LINC00476Q8WZB0 136 aa8.6□□□□□ -1.03
GABPB1-201ENST00000220429 COL7A1Q02388 2944 aa8.59□□□□□ -1.03
GABPB1-201ENST00000220429 RETNLBQ9BQ08 111 aa8.57□□□□□ -1.04
GABPB1-201ENST00000220429 IGLV1-50A0A075B6I6 118 aa8.56□□□□□ -1.04
GABPB1-201ENST00000220429 DYNC2H1Q8NCM8 4307 aaKnown RBP8.56□□□□□ -1.04
GABPB1-201ENST00000220429 STAB2Q8WWQ8 2551 aa8.55□□□□□ -1.04
GABPB1-201ENST00000220429 RTL8CO15255 209 aa8.54□□□□□ -1.04
GABPB1-201ENST00000220429 CASC10Q5T4H9 136 aa8.54□□□□□ -1.04
GABPB1-201ENST00000220429 A0A087X002 238 aa8.54□□□□□ -1.04
GABPB1-201ENST00000220429 DHRS4-AS1Q9P1J3 65 aa8.53□□□□□ -1.04
GABPB1-201ENST00000220429 RPL37AP61513 92 aaKnown RBP8.52□□□□□ -1.05
GABPB1-201ENST00000220429 IGLV5-37A0A075B6J1 123 aa8.52□□□□□ -1.05
GABPB1-201ENST00000220429 PCOTHQ58A44 107 aa8.52□□□□□ -1.05
GABPB1-201ENST00000220429 PLECQ15149 4684 aaKnown RBP8.5□□□□□ -1.05
GABPB1-201ENST00000220429 TLX1NBP0CAT3 122 aa8.49□□□□□ -1.05
GABPB1-201ENST00000220429 HRES1P13985 223 aa8.49□□□□□ -1.05
GABPB1-201ENST00000220429 DNAH7Q8WXX0 4024 aa8.49□□□□□ -1.05
GABPB1-201ENST00000220429 Q6ZRX8 168 aa8.48□□□□□ -1.05
GABPB1-201ENST00000220429 ZNF706Q9Y5V0 76 aaPredicted RBP8.48□□□□□ -1.05
GABPB1-201ENST00000220429 CSMD3Q7Z407 3707 aa8.48□□□□□ -1.05
GABPB1-201ENST00000220429 CSAG1Q6PB30 78 aa8.48□□□□□ -1.05
GABPB1-201ENST00000220429 H0Y9J4 135 aa8.47□□□□□ -1.05
GABPB1-201ENST00000220429 A0A0G2JQZ4 141 aa8.45□□□□□ -1.06
GABPB1-201ENST00000220429 A0A1W2PNN7 141 aa8.45□□□□□ -1.06
GABPB1-201ENST00000220429 A0A087WSZ3 146 aa8.45□□□□□ -1.06
GABPB1-201ENST00000220429 FAM168BA1KXE4 195 aa8.44□□□□□ -1.06
GABPB1-201ENST00000220429 Q6ZR54 194 aa8.44□□□□□ -1.06
GABPB1-201ENST00000220429 PLA2G2DQ9UNK4 145 aa8.44□□□□□ -1.06
GABPB1-201ENST00000220429 TENM2Q9NT68 2774 aa8.43□□□□□ -1.06
GABPB1-201ENST00000220429 KRTAP1-5Q9BYS1 174 aa8.43□□□□□ -1.06
GABPB1-201ENST00000220429 IGFL1Q6UW32 110 aa8.42□□□□□ -1.06
GABPB1-201ENST00000220429 KRTAP7-1Q8IUC3 87 aa8.42□□□□□ -1.06
GABPB1-201ENST00000220429 KRTAP4-16G5E9R7 235 aaPredicted RBP8.4□□□□□ -1.06
GABPB1-201ENST00000220429 RPL37AP8A6NKH3 93 aa8.4□□□□□ -1.06
GABPB1-201ENST00000220429 A8MWP4 228 aa8.38□□□□□ -1.07
GABPB1-201ENST00000220429 C1orf134Q5TEV5 83 aa8.38□□□□□ -1.07
GABPB1-201ENST00000220429 PRKDCP78527 4128 aaKnown RBP8.38□□□□□ -1.07
GABPB1-201ENST00000220429 APLNQ9ULZ1 77 aa8.38□□□□□ -1.07
GABPB1-201ENST00000220429 SPATA8Q6RVD6 105 aa8.38□□□□□ -1.07
GABPB1-201ENST00000220429 STARD9Q9P2P6 4700 aa8.37□□□□□ -1.07
GABPB1-201ENST00000220429 VPS13DQ5THJ4 4388 aa8.37□□□□□ -1.07
GABPB1-201ENST00000220429 SPRR1AP35321 89 aa8.36□□□□□ -1.07
GABPB1-201ENST00000220429 UBE2DNLQ8IWF7 75 aa8.35□□□□□ -1.07
GABPB1-201ENST00000220429 IGKV2-24A0A0C4DH68 120 aa8.34□□□□□ -1.07
GABPB1-201ENST00000220429 MMP24-AS1A0A0U1RRL7 71 aa8.32□□□□□ -1.08
GABPB1-201ENST00000220429 TP53AIP1Q9HCN2 124 aa8.31□□□□□ -1.08
GABPB1-201ENST00000220429 A0A096LNI7 61 aa8.31□□□□□ -1.08
GABPB1-201ENST00000220429 LINC00472Q9H8W2 130 aa8.3□□□□□ -1.08
GABPB1-201ENST00000220429 MIR22HGQ0VDD5 57 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms