RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 SPRR1BP22528 89 aa8.32□□□□□ -1.08
SRP54-201ENST00000216774 FAM229BQ4G0N7 80 aa8.31□□□□□ -1.08
SRP54-201ENST00000216774 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.31□□□□□ -1.08
SRP54-201ENST00000216774 LINC00336Q6ZUF6 198 aa8.31□□□□□ -1.08
SRP54-201ENST00000216774 UBE2DNLQ8IWF7 75 aa8.29□□□□□ -1.08
SRP54-201ENST00000216774 PRO0628Q9UI54 55 aa8.29□□□□□ -1.08
SRP54-201ENST00000216774 PKIGQ9Y2B9 76 aa8.29□□□□□ -1.08
SRP54-201ENST00000216774 DEFB116Q30KQ4 102 aa8.28□□□□□ -1.08
SRP54-201ENST00000216774 PHF5AQ7RTV0 110 aaKnown RBP8.28□□□□□ -1.08
SRP54-201ENST00000216774 APLNQ9ULZ1 77 aa8.28□□□□□ -1.08
SRP54-201ENST00000216774 hDV103S1A0JD37 113 aa8.27□□□□□ -1.09
SRP54-201ENST00000216774 KRTAP11-1Q8IUC1 163 aa8.27□□□□□ -1.09
SRP54-201ENST00000216774 NDUFB1O75438 58 aa8.26□□□□□ -1.09
SRP54-201ENST00000216774 CHTF8P0CG12 524 aa8.26□□□□□ -1.09
SRP54-201ENST00000216774 KRTAP21-3Q3LHN1 58 aa8.26□□□□□ -1.09
SRP54-201ENST00000216774 DNAH10Q8IVF4 4471 aa8.26□□□□□ -1.09
SRP54-201ENST00000216774 KRTAP29-1A8MX34 341 aaPredicted RBP8.26□□□□□ -1.09
SRP54-201ENST00000216774 WFDC13Q8IUB5 93 aa8.26□□□□□ -1.09
SRP54-201ENST00000216774 C9orf163Q8N9P6 203 aa8.26□□□□□ -1.09
SRP54-201ENST00000216774 MP68P56378 58 aa8.24□□□□□ -1.09
SRP54-201ENST00000216774 MPLKIPQ8TAP9 179 aa8.24□□□□□ -1.09
SRP54-201ENST00000216774 COL6A5A8TX70 2615 aa8.24□□□□□ -1.09
SRP54-201ENST00000216774 CYP4F30PQ9H0H9 118 aa8.24□□□□□ -1.09
SRP54-201ENST00000216774 PRR15Q8IV56 129 aa8.23□□□□□ -1.09
SRP54-201ENST00000216774 C1orf64Q8NEQ6 169 aa8.23□□□□□ -1.09
SRP54-201ENST00000216774 B9D2Q9BPU9 175 aa8.23□□□□□ -1.09
SRP54-201ENST00000216774 LINC00472Q9H8W2 130 aa8.23□□□□□ -1.09
SRP54-201ENST00000216774 A8MWP4 228 aa8.22□□□□□ -1.09
SRP54-201ENST00000216774 RPL37AP61513 92 aaKnown RBP8.22□□□□□ -1.09
SRP54-201ENST00000216774 DNAH9Q9NYC9 4486 aa8.22□□□□□ -1.09
SRP54-201ENST00000216774 LRCOL1A6NCL2 159 aa8.22□□□□□ -1.09
SRP54-201ENST00000216774 STAB2Q8WWQ8 2551 aa8.21□□□□□ -1.09
SRP54-201ENST00000216774 CASC2Q6XLA1 102 aa8.21□□□□□ -1.1
SRP54-201ENST00000216774 COL7A1Q02388 2944 aa8.2□□□□□ -1.1
SRP54-201ENST00000216774 H3BPC8 53 aa8.2□□□□□ -1.1
SRP54-201ENST00000216774 LYSTQ99698 3801 aa8.2□□□□□ -1.1
SRP54-201ENST00000216774 TRAV22A0A0B4J277 110 aa8.19□□□□□ -1.1
SRP54-201ENST00000216774 KRTAP13-1Q8IUC0 172 aa8.19□□□□□ -1.1
SRP54-201ENST00000216774 NBDYA0A0U1RRE5 68 aa8.18□□□□□ -1.1
SRP54-201ENST00000216774 Q1T7F1 81 aa8.18□□□□□ -1.1
SRP54-201ENST00000216774 SRRM2Q9UQ35 2752 aaKnown RBP8.17□□□□□ -1.1
SRP54-201ENST00000216774 DYNC2H1Q8NCM8 4307 aaKnown RBP8.17□□□□□ -1.1
SRP54-201ENST00000216774 LINC00208Q96KT6 92 aa8.17□□□□□ -1.1
SRP54-201ENST00000216774 MGAM2Q2M2H8 2515 aa8.16□□□□□ -1.1
SRP54-201ENST00000216774 H0Y9P7 68 aa8.15□□□□□ -1.1
SRP54-201ENST00000216774 Q6ZRN7 208 aaPredicted RBP8.15□□□□□ -1.1
SRP54-201ENST00000216774 BRK1Q8WUW1 75 aa8.15□□□□□ -1.1
SRP54-201ENST00000216774 SPANXA2-OT1Q8N9U9 137 aa8.15□□□□□ -1.1
SRP54-201ENST00000216774 PANO1I0J062 215 aa8.14□□□□□ -1.11
SRP54-201ENST00000216774 PRR4Q16378 134 aa8.13□□□□□ -1.11
SRP54-201ENST00000216774 NUPR2A6NF83 97 aa8.12□□□□□ -1.11
SRP54-201ENST00000216774 SPACA4Q8TDM5 124 aa8.12□□□□□ -1.11
SRP54-201ENST00000216774 MMP24-AS1A0A0U1RRL7 71 aa8.12□□□□□ -1.11
SRP54-201ENST00000216774 MDFIQ99750 246 aa8.12□□□□□ -1.11
SRP54-201ENST00000216774 LINC00483Q53H64 154 aa8.1□□□□□ -1.11
SRP54-201ENST00000216774 TENM2Q9NT68 2774 aa8.09□□□□□ -1.11
SRP54-201ENST00000216774 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.09□□□□□ -1.11
SRP54-201ENST00000216774 Q96NJ1 140 aa8.08□□□□□ -1.12
SRP54-201ENST00000216774 V9GYY9 64 aa8.08□□□□□ -1.12
SRP54-201ENST00000216774 ASB16-AS1Q495Z4 193 aa8.07□□□□□ -1.12
SRP54-201ENST00000216774 DNAH7Q8WXX0 4024 aa8.07□□□□□ -1.12
SRP54-201ENST00000216774 IGLV9-49A0A0B4J1Y8 123 aa8.06□□□□□ -1.12
SRP54-201ENST00000216774 MOBPQ13875 183 aa8.06□□□□□ -1.12
SRP54-201ENST00000216774 ZNF706Q9Y5V0 76 aaPredicted RBP8.06□□□□□ -1.12
SRP54-201ENST00000216774 CSMD3Q7Z407 3707 aa8.06□□□□□ -1.12
SRP54-201ENST00000216774 TP53AIP1Q9HCN2 124 aa8.05□□□□□ -1.12
SRP54-201ENST00000216774 PLECQ15149 4684 aaKnown RBP8.04□□□□□ -1.12
SRP54-201ENST00000216774 A0A087WTM6 91 aa8.03□□□□□ -1.12
SRP54-201ENST00000216774 WWC2-AS2Q96NR7 200 aa8.01□□□□□ -1.13
SRP54-201ENST00000216774 C8orf17Q9NRJ1 99 aa8.01□□□□□ -1.13
SRP54-201ENST00000216774 IGLV5-52A0A0A0MRZ9 124 aa8.01□□□□□ -1.13
SRP54-201ENST00000216774 PSPHP1O15172 72 aa8.01□□□□□ -1.13
SRP54-201ENST00000216774 IGLV7-46A0A075B6I9 117 aa8□□□□□ -1.13
SRP54-201ENST00000216774 A0A1B0GVX0 72 aa7.99□□□□□ -1.13
SRP54-201ENST00000216774 PSORS1C2Q9UIG4 136 aa7.99□□□□□ -1.13
SRP54-201ENST00000216774 C1orf195Q5TG92 126 aa7.99□□□□□ -1.13
SRP54-201ENST00000216774 Q6ZR54 194 aa7.99□□□□□ -1.13
SRP54-201ENST00000216774 RTL8CO15255 209 aa7.98□□□□□ -1.13
SRP54-201ENST00000216774 PLAC8Q9NZF1 115 aa7.98□□□□□ -1.13
SRP54-201ENST00000216774 VPS13DQ5THJ4 4388 aa7.97□□□□□ -1.13
SRP54-201ENST00000216774 ZNF861PO60384 105 aa7.97□□□□□ -1.13
SRP54-201ENST00000216774 CDK2AP2O75956 126 aa7.96□□□□□ -1.13
SRP54-201ENST00000216774 LIMD2Q9BT23 127 aa7.96□□□□□ -1.13
SRP54-201ENST00000216774 IGHV6-1A0A0B4J1U7 121 aa7.96□□□□□ -1.14
SRP54-201ENST00000216774 A8MUN3 132 aa7.96□□□□□ -1.14
SRP54-201ENST00000216774 Q8N9P0 234 aaPredicted RBP7.96□□□□□ -1.14
SRP54-201ENST00000216774 COA5Q86WW8 74 aa7.94□□□□□ -1.14
SRP54-201ENST00000216774 Q5VV11 94 aa7.93□□□□□ -1.14
SRP54-201ENST00000216774 MRPL34Q9BQ48 92 aaKnown RBP7.93□□□□□ -1.14
SRP54-201ENST00000216774 CD164Q04900 197 aa7.92□□□□□ -1.14
SRP54-201ENST00000216774 NDUFS5O43920 106 aa7.91□□□□□ -1.14
SRP54-201ENST00000216774 PCOTHQ58A44 107 aa7.91□□□□□ -1.14
SRP54-201ENST00000216774 FBN3Q75N90 2809 aa7.91□□□□□ -1.14
SRP54-201ENST00000216774 ANAPC11Q9NYG5 84 aa7.91□□□□□ -1.14
SRP54-201ENST00000216774 HECTD4Q9Y4D8 3996 aa7.9□□□□□ -1.14
SRP54-201ENST00000216774 STARD9Q9P2P6 4700 aa7.9□□□□□ -1.14
SRP54-201ENST00000216774 PRKDCP78527 4128 aaKnown RBP7.88□□□□□ -1.15
SRP54-201ENST00000216774 DNAH8Q96JB1 4490 aa7.87□□□□□ -1.15
SRP54-201ENST00000216774 PRR15LQ9BU68 103 aa7.87□□□□□ -1.15
SRP54-201ENST00000216774 A0A087X002 238 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms