RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 RTL8CO15255 209 aa5.15□□□□□ -1.59
VAMP3-201ENST00000054666 IGFL1Q6UW32 110 aa5.15□□□□□ -1.59
VAMP3-201ENST00000054666 Q6ZR54 194 aa5.15□□□□□ -1.59
VAMP3-201ENST00000054666 Q8N9L7 120 aa5.15□□□□□ -1.59
VAMP3-201ENST00000054666 IGLV8-61A0A075B6I0 122 aa5.14□□□□□ -1.59
VAMP3-201ENST00000054666 PANO1I0J062 215 aa5.14□□□□□ -1.59
VAMP3-201ENST00000054666 DNHD1Q96M86 4753 aa5.13□□□□□ -1.59
VAMP3-201ENST00000054666 SPRR1BP22528 89 aa5.13□□□□□ -1.59
VAMP3-201ENST00000054666 C1orf134Q5TEV5 83 aa5.13□□□□□ -1.59
VAMP3-201ENST00000054666 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.13□□□□□ -1.59
VAMP3-201ENST00000054666 TMEM258P61165 79 aa5.13□□□□□ -1.59
VAMP3-201ENST00000054666 C20orf197Q8N268 126 aa5.13□□□□□ -1.59
VAMP3-201ENST00000054666 IGLV5-52A0A0A0MRZ9 124 aa5.11□□□□□ -1.59
VAMP3-201ENST00000054666 LY6G6CO95867 125 aa5.11□□□□□ -1.59
VAMP3-201ENST00000054666 TENM2Q9NT68 2774 aa5.11□□□□□ -1.59
VAMP3-201ENST00000054666 A0A087WSZ3 146 aa5.11□□□□□ -1.59
VAMP3-201ENST00000054666 KRTAP13-1Q8IUC0 172 aa5.11□□□□□ -1.59
VAMP3-201ENST00000054666 CYSTM1Q9H1C7 97 aa5.11□□□□□ -1.59
VAMP3-201ENST00000054666 A0A0G2JQZ4 141 aa5.09□□□□□ -1.59
VAMP3-201ENST00000054666 ZNF706Q9Y5V0 76 aaPredicted RBP5.09□□□□□ -1.59
VAMP3-201ENST00000054666 KMT2AQ03164 3969 aa5.09□□□□□ -1.59
VAMP3-201ENST00000054666 PLAC8Q9NZF1 115 aa5.08□□□□□ -1.6
VAMP3-201ENST00000054666 DNAH17Q9UFH2 4485 aa5.08□□□□□ -1.6
VAMP3-201ENST00000054666 K7EQZ3 153 aa5.08□□□□□ -1.6
VAMP3-201ENST00000054666 DSCR10P59022 87 aa5.08□□□□□ -1.6
VAMP3-201ENST00000054666 KLKP1Q107X0 134 aa5.08□□□□□ -1.6
VAMP3-201ENST00000054666 DNAH2Q9P225 4427 aa5.07□□□□□ -1.6
VAMP3-201ENST00000054666 DNAH6Q9C0G6 4158 aa5.07□□□□□ -1.6
VAMP3-201ENST00000054666 WWC2-AS2Q96NR7 200 aa5.07□□□□□ -1.6
VAMP3-201ENST00000054666 MEGF8Q7Z7M0 2845 aa5.06□□□□□ -1.6
VAMP3-201ENST00000054666 J3KT08 172 aa5.06□□□□□ -1.6
VAMP3-201ENST00000054666 PSORS1C2Q9UIG4 136 aa5.06□□□□□ -1.6
VAMP3-201ENST00000054666 SNURFQ9Y675 71 aa5.06□□□□□ -1.6
VAMP3-201ENST00000054666 NDUFC1O43677 76 aa5.05□□□□□ -1.6
VAMP3-201ENST00000054666 KRTAP21-3Q3LHN1 58 aa5.05□□□□□ -1.6
VAMP3-201ENST00000054666 OCR1Q9BZK8 76 aa5.05□□□□□ -1.6
VAMP3-201ENST00000054666 IGLV9-49A0A0B4J1Y8 123 aa5.05□□□□□ -1.6
VAMP3-201ENST00000054666 HCG22E2RYF7 251 aa5.05□□□□□ -1.6
VAMP3-201ENST00000054666 TMEM254Q8TBM7 123 aa5.05□□□□□ -1.6
VAMP3-201ENST00000054666 HECTD4Q9Y4D8 3996 aa5.05□□□□□ -1.6
VAMP3-201ENST00000054666 FAM236DA0A1B0GTK5 79 aa5.04□□□□□ -1.6
VAMP3-201ENST00000054666 FAM236CP0DP71 79 aa5.04□□□□□ -1.6
VAMP3-201ENST00000054666 DEFB116Q30KQ4 102 aa5.04□□□□□ -1.6
VAMP3-201ENST00000054666 LINC00483Q53H64 154 aa5.04□□□□□ -1.6
VAMP3-201ENST00000054666 H7BZZ5 65 aa5.04□□□□□ -1.6
VAMP3-201ENST00000054666 ZNF861PO60384 105 aa5.04□□□□□ -1.6
VAMP3-201ENST00000054666 RPL37AP61513 92 aaKnown RBP5.04□□□□□ -1.6
VAMP3-201ENST00000054666 FAM30AQ9NZY2 134 aa5.03□□□□□ -1.6
VAMP3-201ENST00000054666 ALMS1Q8TCU4 4167 aa5.03□□□□□ -1.6
VAMP3-201ENST00000054666 RPS28P62857 69 aaKnown RBP5.01□□□□□ -1.61
VAMP3-201ENST00000054666 A8MWP4 228 aa5.01□□□□□ -1.61
VAMP3-201ENST00000054666 DNAH8Q96JB1 4490 aa5.01□□□□□ -1.61
VAMP3-201ENST00000054666 MOBPQ13875 183 aa5□□□□□ -1.61
VAMP3-201ENST00000054666 WFDC13Q8IUB5 93 aa5□□□□□ -1.61
VAMP3-201ENST00000054666 LINC00472Q9H8W2 130 aa5□□□□□ -1.61
VAMP3-201ENST00000054666 FRAS1Q86XX4 4008 aa5□□□□□ -1.61
VAMP3-201ENST00000054666 A0A0U1RQV1 116 aa5□□□□□ -1.61
VAMP3-201ENST00000054666 IGLV7-43P04211 117 aa5□□□□□ -1.61
VAMP3-201ENST00000054666 ATP5EP56381 51 aaPredicted RBP5□□□□□ -1.61
VAMP3-201ENST00000054666 PRR15Q8IV56 129 aa5□□□□□ -1.61
VAMP3-201ENST00000054666 NDUFB1O75438 58 aa4.99□□□□□ -1.61
VAMP3-201ENST00000054666 FBN3Q75N90 2809 aa4.99□□□□□ -1.61
VAMP3-201ENST00000054666 KRTAP10-2P60368 255 aa4.98□□□□□ -1.61
VAMP3-201ENST00000054666 CASC2Q6XLA1 102 aa4.98□□□□□ -1.61
VAMP3-201ENST00000054666 HRCT1Q6UXD1 115 aa4.97□□□□□ -1.61
VAMP3-201ENST00000054666 DNAH11Q96DT5 4516 aa4.97□□□□□ -1.61
VAMP3-201ENST00000054666 DNAH5Q8TE73 4624 aa4.97□□□□□ -1.61
VAMP3-201ENST00000054666 LCE6AA0A183 80 aa4.97□□□□□ -1.61
VAMP3-201ENST00000054666 C5orf47Q569G3 176 aa4.97□□□□□ -1.61
VAMP3-201ENST00000054666 CIRBP-AS1Q8TBR5 109 aa4.97□□□□□ -1.61
VAMP3-201ENST00000054666 TGP01266 2768 aa4.96□□□□□ -1.62
VAMP3-201ENST00000054666 ANAPC11Q9NYG5 84 aa4.96□□□□□ -1.62
VAMP3-201ENST00000054666 SERP1Q9Y6X1 66 aa4.96□□□□□ -1.62
VAMP3-201ENST00000054666 CDK2AP2O75956 126 aa4.95□□□□□ -1.62
VAMP3-201ENST00000054666 MP68P56378 58 aa4.95□□□□□ -1.62
VAMP3-201ENST00000054666 KRTAP29-1A8MX34 341 aaPredicted RBP4.95□□□□□ -1.62
VAMP3-201ENST00000054666 SRRM2Q9UQ35 2752 aaKnown RBP4.94□□□□□ -1.62
VAMP3-201ENST00000054666 Q6ZSA8 131 aa4.93□□□□□ -1.62
VAMP3-201ENST00000054666 Q96NJ1 140 aa4.93□□□□□ -1.62
VAMP3-201ENST00000054666 MMP24-AS1A0A0U1RRL7 71 aa4.93□□□□□ -1.62
VAMP3-201ENST00000054666 hDV103S1A0JD37 113 aa4.92□□□□□ -1.62
VAMP3-201ENST00000054666 KRTAP10-1P60331 282 aa4.92□□□□□ -1.62
VAMP3-201ENST00000054666 OXTP01178 125 aa4.92□□□□□ -1.62
VAMP3-201ENST00000054666 ZCCHC13Q8WW36 166 aaKnown RBP4.91□□□□□ -1.62
VAMP3-201ENST00000054666 FAT2Q9NYQ8 4349 aa4.91□□□□□ -1.62
VAMP3-201ENST00000054666 A0A1B0GVX0 72 aa4.91□□□□□ -1.62
VAMP3-201ENST00000054666 H0Y9P7 68 aa4.91□□□□□ -1.62
VAMP3-201ENST00000054666 H3BPC8 53 aa4.91□□□□□ -1.62
VAMP3-201ENST00000054666 CD164Q04900 197 aa4.91□□□□□ -1.62
VAMP3-201ENST00000054666 SSBP3-AS1Q7Z2R9 100 aa4.91□□□□□ -1.62
VAMP3-201ENST00000054666 C8orf17Q9NRJ1 99 aa4.9□□□□□ -1.63
VAMP3-201ENST00000054666 IGHV6-1A0A0B4J1U7 121 aa4.89□□□□□ -1.63
VAMP3-201ENST00000054666 HYDINQ4G0P3 5121 aa4.89□□□□□ -1.63
VAMP3-201ENST00000054666 LINC00208Q96KT6 92 aa4.89□□□□□ -1.63
VAMP3-201ENST00000054666 TRAV22A0A0B4J277 110 aa4.88□□□□□ -1.63
VAMP3-201ENST00000054666 J3QL48 77 aa4.88□□□□□ -1.63
VAMP3-201ENST00000054666 TP53AIP1Q9HCN2 124 aa4.88□□□□□ -1.63
VAMP3-201ENST00000054666 FAM229BQ4G0N7 80 aa4.87□□□□□ -1.63
VAMP3-201ENST00000054666 SPINK6Q6UWN8 80 aa4.87□□□□□ -1.63
VAMP3-201ENST00000054666 NDUFS5O43920 106 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms