RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 MRPL55Q7Z7F7 128 aaKnown RBP11.13□□□□□ -0.63
PHGDH-232ENST00000641947 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.13□□□□□ -0.63
PHGDH-232ENST00000641947 IGLV1-50A0A075B6I6 118 aa11.12□□□□□ -0.63
PHGDH-232ENST00000641947 KCNQ1DNQ9H478 68 aa11.12□□□□□ -0.63
PHGDH-232ENST00000641947 M0QXV9 152 aa11.11□□□□□ -0.63
PHGDH-232ENST00000641947 DIRC1Q969H9 104 aa11.11□□□□□ -0.63
PHGDH-232ENST00000641947 KRTAP10-2P60368 255 aa11.11□□□□□ -0.63
PHGDH-232ENST00000641947 IGLV5-52A0A0A0MRZ9 124 aa11.1□□□□□ -0.63
PHGDH-232ENST00000641947 ETDBQ3ZM63 59 aa11.09□□□□□ -0.63
PHGDH-232ENST00000641947 SPACA4Q8TDM5 124 aa11.09□□□□□ -0.63
PHGDH-232ENST00000641947 LINC00575Q6W349 94 aa11.08□□□□□ -0.64
PHGDH-232ENST00000641947 PKIGQ9Y2B9 76 aa11.08□□□□□ -0.64
PHGDH-232ENST00000641947 PKHD1P08F94 4074 aa11.08□□□□□ -0.64
PHGDH-232ENST00000641947 ELOF1P60002 83 aaKnown RBP11.08□□□□□ -0.64
PHGDH-232ENST00000641947 ANKRD29Q8N6D5 301 aa11.08□□□□□ -0.64
PHGDH-232ENST00000641947 PHF5AQ7RTV0 110 aaKnown RBP11.07□□□□□ -0.64
PHGDH-232ENST00000641947 KRTAP11-1Q8IUC1 163 aa11.07□□□□□ -0.64
PHGDH-232ENST00000641947 LINC01600Q96MT4 127 aa11.07□□□□□ -0.64
PHGDH-232ENST00000641947 KRTAP4-16G5E9R7 235 aaPredicted RBP11.06□□□□□ -0.64
PHGDH-232ENST00000641947 COX7BP24311 80 aa11.06□□□□□ -0.64
PHGDH-232ENST00000641947 PRYO14603 147 aa11.05□□□□□ -0.64
PHGDH-232ENST00000641947 SPRR1AP35321 89 aa11.05□□□□□ -0.64
PHGDH-232ENST00000641947 LINC00474Q9P2X8 69 aa11.05□□□□□ -0.64
PHGDH-232ENST00000641947 TRBV7-6A0A0J9YX20 115 aa11.05□□□□□ -0.64
PHGDH-232ENST00000641947 LINC00528Q8N1L1 170 aa11.05□□□□□ -0.64
PHGDH-232ENST00000641947 H3BT86 120 aa11.04□□□□□ -0.64
PHGDH-232ENST00000641947 EPM2AB3EWF7 344 aa11.03□□□□□ -0.64
PHGDH-232ENST00000641947 A0A1B0GX51 115 aa11.03□□□□□ -0.64
PHGDH-232ENST00000641947 DNAL4O96015 105 aa11.03□□□□□ -0.64
PHGDH-232ENST00000641947 hADV29S1A0JD25 119 aa11.02□□□□□ -0.65
PHGDH-232ENST00000641947 BAALC-AS2P0C853 105 aa11.01□□□□□ -0.65
PHGDH-232ENST00000641947 TEN1Q86WV5 123 aa11.01□□□□□ -0.65
PHGDH-232ENST00000641947 B5MCH6 92 aa11□□□□□ -0.65
PHGDH-232ENST00000641947 RYR3Q15413 4870 aa11□□□□□ -0.65
PHGDH-232ENST00000641947 REG3GQ6UW15 175 aa10.99□□□□□ -0.65
PHGDH-232ENST00000641947 DPH3Q96FX2 82 aa10.99□□□□□ -0.65
PHGDH-232ENST00000641947 PCP4P48539 62 aa10.98□□□□□ -0.65
PHGDH-232ENST00000641947 OCIAD2Q56VL3 154 aa10.98□□□□□ -0.65
PHGDH-232ENST00000641947 Q9BRP9 147 aa10.98□□□□□ -0.65
PHGDH-232ENST00000641947 Q6ZRX8 168 aa10.98□□□□□ -0.65
PHGDH-232ENST00000641947 LRP1BQ9NZR2 4599 aa10.97□□□□□ -0.65
PHGDH-232ENST00000641947 Q6ZQY7 126 aa10.97□□□□□ -0.65
PHGDH-232ENST00000641947 ORMDL1Q9P0S3 153 aa10.97□□□□□ -0.65
PHGDH-232ENST00000641947 DYNC1H1Q14204 4646 aaKnown RBP10.97□□□□□ -0.65
PHGDH-232ENST00000641947 TEX49A0A1B0GTD5 131 aa10.96□□□□□ -0.65
PHGDH-232ENST00000641947 ETDCA0A1B0GVM5 59 aa10.96□□□□□ -0.65
PHGDH-232ENST00000641947 UBE2BP63146 152 aa10.96□□□□□ -0.65
PHGDH-232ENST00000641947 PLAC8Q9NZF1 115 aa10.96□□□□□ -0.65
PHGDH-232ENST00000641947 FAM30AQ9NZY2 134 aa10.96□□□□□ -0.65
PHGDH-232ENST00000641947 SRRM2Q9UQ35 2752 aaKnown RBP10.95□□□□□ -0.66
PHGDH-232ENST00000641947 KRTAP10-1P60331 282 aa10.95□□□□□ -0.66
PHGDH-232ENST00000641947 PPDPFLQ8WWR9 84 aa10.93□□□□□ -0.66
PHGDH-232ENST00000641947 ERC2-IT1O76042 136 aa10.91□□□□□ -0.66
PHGDH-232ENST00000641947 SNCGO76070 127 aa10.91□□□□□ -0.66
PHGDH-232ENST00000641947 PRLHP81277 87 aa10.91□□□□□ -0.66
PHGDH-232ENST00000641947 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.91□□□□□ -0.66
PHGDH-232ENST00000641947 FAM19A1Q7Z5A9 133 aa10.9□□□□□ -0.66
PHGDH-232ENST00000641947 SMCR5Q8TEV8 140 aa10.9□□□□□ -0.66
PHGDH-232ENST00000641947 INAFM2P0DMQ5 153 aa10.9□□□□□ -0.67
PHGDH-232ENST00000641947 Q6ZSA8 131 aa10.9□□□□□ -0.67
PHGDH-232ENST00000641947 DHRS4-AS1Q9P1J3 65 aa10.89□□□□□ -0.67
PHGDH-232ENST00000641947 A0A1B0GV72 72 aa10.88□□□□□ -0.67
PHGDH-232ENST00000641947 LINC00336Q6ZUF6 198 aa10.88□□□□□ -0.67
PHGDH-232ENST00000641947 A0A1B0GVY2 172 aa10.88□□□□□ -0.67
PHGDH-232ENST00000641947 TMEM256-PLSCR3K7ERE1 68 aa10.88□□□□□ -0.67
PHGDH-232ENST00000641947 LINC01547P58512 204 aaPredicted RBP10.87□□□□□ -0.67
PHGDH-232ENST00000641947 HAMPP81172 84 aa10.87□□□□□ -0.67
PHGDH-232ENST00000641947 ST20-AS1Q8NBB2 130 aa10.87□□□□□ -0.67
PHGDH-232ENST00000641947 CIRBP-AS1Q8TBR5 109 aa10.87□□□□□ -0.67
PHGDH-232ENST00000641947 OBSCN-AS1Q96MR7 158 aa10.87□□□□□ -0.67
PHGDH-232ENST00000641947 K7ERU9 68 aa10.86□□□□□ -0.67
PHGDH-232ENST00000641947 C21orf62-AS1Q17RA5 79 aa10.85□□□□□ -0.67
PHGDH-232ENST00000641947 SCXQ7RTU7 201 aa10.85□□□□□ -0.67
PHGDH-232ENST00000641947 KRTAP13-1Q8IUC0 172 aa10.85□□□□□ -0.67
PHGDH-232ENST00000641947 BCE1O60756 84 aa10.84□□□□□ -0.67
PHGDH-232ENST00000641947 PSORS1C2Q9UIG4 136 aa10.84□□□□□ -0.67
PHGDH-232ENST00000641947 APOBP04114 4563 aaKnown RBP10.84□□□□□ -0.67
PHGDH-232ENST00000641947 Q8N377 158 aa10.82□□□□□ -0.68
PHGDH-232ENST00000641947 H0Y9J4 135 aa10.82□□□□□ -0.68
PHGDH-232ENST00000641947 DEFB105AQ8NG35 78 aa10.82□□□□□ -0.68
PHGDH-232ENST00000641947 HIGD2AQ9BW72 106 aa10.82□□□□□ -0.68
PHGDH-232ENST00000641947 C14orf132Q9NPU4 83 aa10.82□□□□□ -0.68
PHGDH-232ENST00000641947 VPS13BQ7Z7G8 4022 aa10.82□□□□□ -0.68
PHGDH-232ENST00000641947 IGLV5-48A0A075B6I7 105 aa10.8□□□□□ -0.68
PHGDH-232ENST00000641947 UBE2AP49459 152 aa10.8□□□□□ -0.68
PHGDH-232ENST00000641947 H3BQ85 93 aa10.78□□□□□ -0.68
PHGDH-232ENST00000641947 J3QR89 54 aa10.78□□□□□ -0.68
PHGDH-232ENST00000641947 C3orf22Q8N5N4 141 aa10.78□□□□□ -0.68
PHGDH-232ENST00000641947 LAMTOR3Q9UHA4 124 aa10.78□□□□□ -0.68
PHGDH-232ENST00000641947 VPS25Q9BRG1 176 aa10.77□□□□□ -0.68
PHGDH-232ENST00000641947 NDUFV3P56181 108 aaKnown RBP10.76□□□□□ -0.69
PHGDH-232ENST00000641947 C1orf137Q5JT78 98 aa10.76□□□□□ -0.69
PHGDH-232ENST00000641947 JMJD7-PLA2G4BH0Y9G9 81 aa10.75□□□□□ -0.69
PHGDH-232ENST00000641947 GHRHP01286 108 aa10.74□□□□□ -0.69
PHGDH-232ENST00000641947 SMIM29Q86T20 159 aa10.73□□□□□ -0.69
PHGDH-232ENST00000641947 RBM3P98179 157 aaKnown RBP10.72□□□□□ -0.69
PHGDH-232ENST00000641947 CDIP1Q9H305 208 aa10.71□□□□□ -0.69
PHGDH-232ENST00000641947 GAGE2AQ6NT46 116 aa10.7□□□□□ -0.7
PHGDH-232ENST00000641947 TRBV7-4A0A0J9YYF1 115 aa10.69□□□□□ -0.7
PHGDH-232ENST00000641947 Q6ZQT0 140 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms