RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 HIGD1BQ9P298 99 aa8.55□□□□□ -1.04
SRRM4-204ENST00000641899 C3orf22Q8N5N4 141 aa8.54□□□□□ -1.04
SRRM4-204ENST00000641899 C11orf86A6NJI1 115 aa8.53□□□□□ -1.04
SRRM4-204ENST00000641899 SMIM1B2RUZ4 78 aa8.53□□□□□ -1.04
SRRM4-204ENST00000641899 E9PLD3 99 aa8.53□□□□□ -1.04
SRRM4-204ENST00000641899 SPINK1P00995 79 aa8.53□□□□□ -1.04
SRRM4-204ENST00000641899 DAND5Q8N907 189 aa8.53□□□□□ -1.04
SRRM4-204ENST00000641899 HIGD2AQ9BW72 106 aa8.53□□□□□ -1.04
SRRM4-204ENST00000641899 TINCRA0A1B0GVN0 87 aa8.52□□□□□ -1.05
SRRM4-204ENST00000641899 TTTY13Q9BZ97 58 aa8.52□□□□□ -1.05
SRRM4-204ENST00000641899 MYMXA0A1B0GTQ4 84 aa8.51□□□□□ -1.05
SRRM4-204ENST00000641899 A6NDN8 102 aa8.51□□□□□ -1.05
SRRM4-204ENST00000641899 TMEM170BQ5T4T1 132 aa8.51□□□□□ -1.05
SRRM4-204ENST00000641899 TMEM238C9JI98 176 aa8.5□□□□□ -1.05
SRRM4-204ENST00000641899 H3BRM9 83 aa8.5□□□□□ -1.05
SRRM4-204ENST00000641899 CFC1BP0CG36 223 aa8.5□□□□□ -1.05
SRRM4-204ENST00000641899 M0R378 163 aa8.49□□□□□ -1.05
SRRM4-204ENST00000641899 PFN2P35080 140 aa8.48□□□□□ -1.05
SRRM4-204ENST00000641899 TAL2Q16559 108 aa8.48□□□□□ -1.05
SRRM4-204ENST00000641899 Q8NBF4 154 aa8.48□□□□□ -1.05
SRRM4-204ENST00000641899 SPRR4Q96PI1 79 aa8.48□□□□□ -1.05
SRRM4-204ENST00000641899 IGLV5-45A0A087WSX0 123 aa8.47□□□□□ -1.05
SRRM4-204ENST00000641899 ZNF815PA8K554 130 aa8.47□□□□□ -1.05
SRRM4-204ENST00000641899 TAX1BP3O14907 124 aa8.47□□□□□ -1.05
SRRM4-204ENST00000641899 VPREB1P12018 145 aa8.47□□□□□ -1.05
SRRM4-204ENST00000641899 COX17Q14061 63 aa8.47□□□□□ -1.05
SRRM4-204ENST00000641899 TMEM223A0PJW6 202 aa8.46□□□□□ -1.06
SRRM4-204ENST00000641899 LEPROTO15243 131 aa8.46□□□□□ -1.06
SRRM4-204ENST00000641899 SPINK8P0C7L1 97 aa8.46□□□□□ -1.06
SRRM4-204ENST00000641899 ZNF22P17026 224 aaPredicted RBP8.46□□□□□ -1.06
SRRM4-204ENST00000641899 LGALS3P17931 250 aaKnown RBP8.46□□□□□ -1.06
SRRM4-204ENST00000641899 HIST1H4GQ99525 98 aa8.46□□□□□ -1.06
SRRM4-204ENST00000641899 SND1-IT1Q9HBX3 110 aa8.46□□□□□ -1.06
SRRM4-204ENST00000641899 SCGB1D4Q6XE38 83 aa8.45□□□□□ -1.06
SRRM4-204ENST00000641899 Q6ZVH6 145 aa8.45□□□□□ -1.06
SRRM4-204ENST00000641899 CEND1Q8N111 149 aa8.45□□□□□ -1.06
SRRM4-204ENST00000641899 J3QQQ9 107 aa8.44□□□□□ -1.06
SRRM4-204ENST00000641899 RPS29P62273 56 aaKnown RBP8.44□□□□□ -1.06
SRRM4-204ENST00000641899 SFTA2Q6UW10 78 aa8.44□□□□□ -1.06
SRRM4-204ENST00000641899 KRTAP4-1Q9BYQ7 146 aa8.44□□□□□ -1.06
SRRM4-204ENST00000641899 SMIM13P0DJ93 91 aa8.43□□□□□ -1.06
SRRM4-204ENST00000641899 VAMP3Q15836 100 aa8.43□□□□□ -1.06
SRRM4-204ENST00000641899 ERG28Q9UKR5 140 aa8.43□□□□□ -1.06
SRRM4-204ENST00000641899 SLC25A20O43772 301 aa8.42□□□□□ -1.06
SRRM4-204ENST00000641899 FXYD2P54710 66 aa8.42□□□□□ -1.06
SRRM4-204ENST00000641899 C9orf118A6NHY6 69 aa8.41□□□□□ -1.06
SRRM4-204ENST00000641899 TSPEAR-AS2P59090 65 aa8.41□□□□□ -1.06
SRRM4-204ENST00000641899 XP32Q5T750 250 aa8.41□□□□□ -1.06
SRRM4-204ENST00000641899 RAB37Q96AX2 223 aa8.4□□□□□ -1.06
SRRM4-204ENST00000641899 UBE2V1Q13404 147 aa8.39□□□□□ -1.07
SRRM4-204ENST00000641899 NHP2Q9NX24 153 aaKnown RBP8.39□□□□□ -1.07
SRRM4-204ENST00000641899 TMEM238LA0A1B0GVL6 79 aa8.38□□□□□ -1.07
SRRM4-204ENST00000641899 A6NJY4 79 aa8.38□□□□□ -1.07
SRRM4-204ENST00000641899 SSBP3-AS1Q7Z2R9 100 aa8.38□□□□□ -1.07
SRRM4-204ENST00000641899 SPANXB1Q9NS25 103 aaPredicted RBP8.38□□□□□ -1.07
SRRM4-204ENST00000641899 H3BUT2 72 aa8.37□□□□□ -1.07
SRRM4-204ENST00000641899 PRYO14603 147 aa8.37□□□□□ -1.07
SRRM4-204ENST00000641899 IGLV5-39A0A0G2JS06 123 aa8.36□□□□□ -1.07
SRRM4-204ENST00000641899 ETDCA0A1B0GVM5 59 aa8.36□□□□□ -1.07
SRRM4-204ENST00000641899 K7ERJ3 54 aa8.36□□□□□ -1.07
SRRM4-204ENST00000641899 Q8N377 158 aa8.36□□□□□ -1.07
SRRM4-204ENST00000641899 SMCR5Q8TEV8 140 aa8.35□□□□□ -1.07
SRRM4-204ENST00000641899 LINC00158P58513 81 aa8.34□□□□□ -1.07
SRRM4-204ENST00000641899 MT1HP80294 61 aa8.34□□□□□ -1.07
SRRM4-204ENST00000641899 MOBPQ13875 183 aa8.34□□□□□ -1.07
SRRM4-204ENST00000641899 LINC00483Q53H64 154 aa8.34□□□□□ -1.07
SRRM4-204ENST00000641899 LCE2CQ5TA81 110 aa8.34□□□□□ -1.07
SRRM4-204ENST00000641899 GTF2H5Q6ZYL4 71 aa8.34□□□□□ -1.07
SRRM4-204ENST00000641899 ZNF625Q96I27 306 aaPredicted RBP8.34□□□□□ -1.07
SRRM4-204ENST00000641899 NAA38Q9BRA0 125 aaKnown RBP8.34□□□□□ -1.07
SRRM4-204ENST00000641899 IGLV9-49A0A0B4J1Y8 123 aa8.33□□□□□ -1.08
SRRM4-204ENST00000641899 A0A0J9YXY3 114 aa8.33□□□□□ -1.08
SRRM4-204ENST00000641899 A0A1B0GWB2 263 aa8.33□□□□□ -1.08
SRRM4-204ENST00000641899 A0A1W2PPM0 123 aa8.33□□□□□ -1.08
SRRM4-204ENST00000641899 FABP2P12104 132 aa8.33□□□□□ -1.08
SRRM4-204ENST00000641899 GAGE2AQ6NT46 116 aa8.33□□□□□ -1.08
SRRM4-204ENST00000641899 K7EP34 96 aa8.31□□□□□ -1.08
SRRM4-204ENST00000641899 M0R2T5 61 aa8.31□□□□□ -1.08
SRRM4-204ENST00000641899 KCNQ1DNQ9H478 68 aa8.31□□□□□ -1.08
SRRM4-204ENST00000641899 IGLV8-61A0A075B6I0 122 aa8.3□□□□□ -1.08
SRRM4-204ENST00000641899 Q8NDZ9 215 aa8.3□□□□□ -1.08
SRRM4-204ENST00000641899 SPCS1Q9Y6A9 102 aa8.3□□□□□ -1.08
SRRM4-204ENST00000641899 TIMM17BO60830 172 aa8.29□□□□□ -1.08
SRRM4-204ENST00000641899 SPRR1AP35321 89 aa8.29□□□□□ -1.08
SRRM4-204ENST00000641899 MUSTN1Q8IVN3 82 aa8.28□□□□□ -1.08
SRRM4-204ENST00000641899 SPANXDQ9BXN6 97 aa8.28□□□□□ -1.08
SRRM4-204ENST00000641899 SPANXCQ9NY87 97 aa8.28□□□□□ -1.08
SRRM4-204ENST00000641899 A4D1N5 150 aa8.26□□□□□ -1.09
SRRM4-204ENST00000641899 LORP23490 312 aaPredicted RBP8.26□□□□□ -1.09
SRRM4-204ENST00000641899 KRTAP10-6P60371 365 aaPredicted RBP8.26□□□□□ -1.09
SRRM4-204ENST00000641899 PCOTHQ58A44 107 aa8.26□□□□□ -1.09
SRRM4-204ENST00000641899 LITAFQ99732 161 aa8.26□□□□□ -1.09
SRRM4-204ENST00000641899 CFC1P0CG37 223 aa8.25□□□□□ -1.09
SRRM4-204ENST00000641899 IFITM1P13164 125 aa8.25□□□□□ -1.09
SRRM4-204ENST00000641899 HERV-K104P63124 156 aa8.25□□□□□ -1.09
SRRM4-204ENST00000641899 C9orf153Q5TBE3 101 aa8.25□□□□□ -1.09
SRRM4-204ENST00000641899 LIMD2Q9BT23 127 aa8.25□□□□□ -1.09
SRRM4-204ENST00000641899 PRO1854Q9UHT4 67 aa8.25□□□□□ -1.09
SRRM4-204ENST00000641899 A0A0U1RRA0 63 aa8.24□□□□□ -1.09
SRRM4-204ENST00000641899 NCR3O14931 201 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms