RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 H3BQ85 93 aa10.94□□□□□ -0.66
PHGDH-229ENST00000641891 PLA2G2DQ9UNK4 145 aa10.94□□□□□ -0.66
PHGDH-229ENST00000641891 DNAH10Q8IVF4 4471 aa10.93□□□□□ -0.66
PHGDH-229ENST00000641891 APLNQ9ULZ1 77 aa10.93□□□□□ -0.66
PHGDH-229ENST00000641891 STAB2Q8WWQ8 2551 aa10.93□□□□□ -0.66
PHGDH-229ENST00000641891 FAM19A5Q7Z5A7 132 aaPredicted RBP10.92□□□□□ -0.66
PHGDH-229ENST00000641891 B5MCH6 92 aa10.92□□□□□ -0.66
PHGDH-229ENST00000641891 UBE2DNLQ8IWF7 75 aa10.92□□□□□ -0.66
PHGDH-229ENST00000641891 IGLV5-37A0A075B6J1 123 aa10.91□□□□□ -0.66
PHGDH-229ENST00000641891 B9D2Q9BPU9 175 aa10.91□□□□□ -0.66
PHGDH-229ENST00000641891 IGLV1-50A0A075B6I6 118 aa10.9□□□□□ -0.66
PHGDH-229ENST00000641891 LOC107984640A0A0U1RRK4 108 aa10.9□□□□□ -0.66
PHGDH-229ENST00000641891 HIST1H4AP62805 103 aaKnown RBP10.9□□□□□ -0.66
PHGDH-229ENST00000641891 UBL5Q9BZL1 73 aa10.9□□□□□ -0.66
PHGDH-229ENST00000641891 TRBV7-4A0A0J9YYF1 115 aa10.89□□□□□ -0.67
PHGDH-229ENST00000641891 KRTAP4-16G5E9R7 235 aaPredicted RBP10.87□□□□□ -0.67
PHGDH-229ENST00000641891 GHRHP01286 108 aa10.87□□□□□ -0.67
PHGDH-229ENST00000641891 DEFB105AQ8NG35 78 aa10.87□□□□□ -0.67
PHGDH-229ENST00000641891 PRYO14603 147 aa10.86□□□□□ -0.67
PHGDH-229ENST00000641891 PSCAO43653 123 aa10.86□□□□□ -0.67
PHGDH-229ENST00000641891 MRPL55Q7Z7F7 128 aaKnown RBP10.86□□□□□ -0.67
PHGDH-229ENST00000641891 Q9BRP9 147 aa10.86□□□□□ -0.67
PHGDH-229ENST00000641891 CSMD3Q7Z407 3707 aa10.86□□□□□ -0.67
PHGDH-229ENST00000641891 PDE6GP18545 87 aa10.86□□□□□ -0.67
PHGDH-229ENST00000641891 Q6ZRX8 168 aa10.86□□□□□ -0.67
PHGDH-229ENST00000641891 DNAH7Q8WXX0 4024 aa10.85□□□□□ -0.67
PHGDH-229ENST00000641891 FAM19A1Q7Z5A9 133 aa10.85□□□□□ -0.67
PHGDH-229ENST00000641891 DYNC2H1Q8NCM8 4307 aaKnown RBP10.85□□□□□ -0.67
PHGDH-229ENST00000641891 SPRR1AP35321 89 aa10.84□□□□□ -0.67
PHGDH-229ENST00000641891 ATP5EP2Q5VTU8 51 aa10.84□□□□□ -0.67
PHGDH-229ENST00000641891 A0A096LNI7 61 aa10.84□□□□□ -0.67
PHGDH-229ENST00000641891 Q6ZVQ6 151 aa10.84□□□□□ -0.67
PHGDH-229ENST00000641891 Q8N377 158 aa10.84□□□□□ -0.67
PHGDH-229ENST00000641891 ETDCA0A1B0GVM5 59 aa10.83□□□□□ -0.68
PHGDH-229ENST00000641891 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.83□□□□□ -0.68
PHGDH-229ENST00000641891 IGKV2-24A0A0C4DH68 120 aa10.83□□□□□ -0.68
PHGDH-229ENST00000641891 LINC01547P58512 204 aaPredicted RBP10.83□□□□□ -0.68
PHGDH-229ENST00000641891 C3orf22Q8N5N4 141 aa10.82□□□□□ -0.68
PHGDH-229ENST00000641891 SS18L2Q9UHA2 77 aa10.82□□□□□ -0.68
PHGDH-229ENST00000641891 ATOX1O00244 68 aa10.81□□□□□ -0.68
PHGDH-229ENST00000641891 ST20-AS1Q8NBB2 130 aa10.81□□□□□ -0.68
PHGDH-229ENST00000641891 DHRS4-AS1Q9P1J3 65 aa10.81□□□□□ -0.68
PHGDH-229ENST00000641891 CNBPP62633 177 aaKnown RBP10.8□□□□□ -0.68
PHGDH-229ENST00000641891 HAMPP81172 84 aa10.8□□□□□ -0.68
PHGDH-229ENST00000641891 ERC2-IT1O76042 136 aa10.79□□□□□ -0.68
PHGDH-229ENST00000641891 A0A1W2PNN7 141 aa10.79□□□□□ -0.68
PHGDH-229ENST00000641891 C16orf90A8MZG2 172 aa10.78□□□□□ -0.68
PHGDH-229ENST00000641891 PLECQ15149 4684 aaKnown RBP10.78□□□□□ -0.68
PHGDH-229ENST00000641891 REG3GQ6UW15 175 aa10.77□□□□□ -0.69
PHGDH-229ENST00000641891 UQCRQO14949 82 aa10.76□□□□□ -0.69
PHGDH-229ENST00000641891 COX7CP15954 63 aa10.76□□□□□ -0.69
PHGDH-229ENST00000641891 UBE2BP63146 152 aa10.76□□□□□ -0.69
PHGDH-229ENST00000641891 CHTF8P0CG12 524 aa10.75□□□□□ -0.69
PHGDH-229ENST00000641891 SCXQ7RTU7 201 aa10.75□□□□□ -0.69
PHGDH-229ENST00000641891 TENM2Q9NT68 2774 aa10.75□□□□□ -0.69
PHGDH-229ENST00000641891 C9orf153Q5TBE3 101 aa10.75□□□□□ -0.69
PHGDH-229ENST00000641891 NBDYA0A0U1RRE5 68 aa10.74□□□□□ -0.69
PHGDH-229ENST00000641891 NUPR2A6NF83 97 aa10.74□□□□□ -0.69
PHGDH-229ENST00000641891 IGLV5-48A0A075B6I7 105 aa10.72□□□□□ -0.69
PHGDH-229ENST00000641891 LRCOL1A6NCL2 159 aa10.72□□□□□ -0.69
PHGDH-229ENST00000641891 C14orf177Q52M58 125 aa10.72□□□□□ -0.69
PHGDH-229ENST00000641891 C3orf84H3BNL1 204 aa10.71□□□□□ -0.69
PHGDH-229ENST00000641891 CXCL6P80162 114 aa10.7□□□□□ -0.7
PHGDH-229ENST00000641891 STARD9Q9P2P6 4700 aa10.7□□□□□ -0.7
PHGDH-229ENST00000641891 PRLHP81277 87 aa10.7□□□□□ -0.7
PHGDH-229ENST00000641891 SERP2Q8N6R1 65 aa10.7□□□□□ -0.7
PHGDH-229ENST00000641891 TNP2Q05952 138 aa10.69□□□□□ -0.7
PHGDH-229ENST00000641891 Q6ZRN7 208 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-229ENST00000641891 KRTAP11-1Q8IUC1 163 aa10.69□□□□□ -0.7
PHGDH-229ENST00000641891 PRKDCP78527 4128 aaKnown RBP10.69□□□□□ -0.7
PHGDH-229ENST00000641891 PHF5AQ7RTV0 110 aaKnown RBP10.69□□□□□ -0.7
PHGDH-229ENST00000641891 CYSTM1Q9H1C7 97 aa10.67□□□□□ -0.7
PHGDH-229ENST00000641891 A0A1W2PNM2 257 aa10.66□□□□□ -0.7
PHGDH-229ENST00000641891 C1orf137Q5JT78 98 aa10.66□□□□□ -0.7
PHGDH-229ENST00000641891 C9orf163Q8N9P6 203 aa10.66□□□□□ -0.7
PHGDH-229ENST00000641891 CRYGAP11844 174 aa10.65□□□□□ -0.71
PHGDH-229ENST00000641891 SMIM29Q86T20 159 aa10.65□□□□□ -0.71
PHGDH-229ENST00000641891 NREPQ16612 68 aa10.64□□□□□ -0.71
PHGDH-229ENST00000641891 PANO1I0J062 215 aa10.63□□□□□ -0.71
PHGDH-229ENST00000641891 Q8N9L7 120 aa10.63□□□□□ -0.71
PHGDH-229ENST00000641891 HIGD2AQ9BW72 106 aa10.63□□□□□ -0.71
PHGDH-229ENST00000641891 A0A0G2JQZ4 141 aa10.61□□□□□ -0.71
PHGDH-229ENST00000641891 FUSP35637 526 aaKnown RBP eCLIP10.61□□□□□ -0.71
PHGDH-229ENST00000641891 VPS13DQ5THJ4 4388 aa10.6□□□□□ -0.71
PHGDH-229ENST00000641891 Q8NBF4 154 aa10.59□□□□□ -0.71
PHGDH-229ENST00000641891 MEGF8Q7Z7M0 2845 aa10.59□□□□□ -0.71
PHGDH-229ENST00000641891 LINC00476Q8WZB0 136 aa10.59□□□□□ -0.71
PHGDH-229ENST00000641891 BPY2O14599 106 aa10.58□□□□□ -0.72
PHGDH-229ENST00000641891 DNHD1Q96M86 4753 aa10.57□□□□□ -0.72
PHGDH-229ENST00000641891 EPM2AB3EWF7 344 aa10.57□□□□□ -0.72
PHGDH-229ENST00000641891 IGKV4-1P06312 121 aa10.57□□□□□ -0.72
PHGDH-229ENST00000641891 F8WEM9 126 aa10.55□□□□□ -0.72
PHGDH-229ENST00000641891 SPRR4Q96PI1 79 aa10.55□□□□□ -0.72
PHGDH-229ENST00000641891 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.55□□□□□ -0.72
PHGDH-229ENST00000641891 DPH3Q96FX2 82 aa10.54□□□□□ -0.72
PHGDH-229ENST00000641891 A0A087WTM6 91 aa10.53□□□□□ -0.72
PHGDH-229ENST00000641891 IGFL1Q6UW32 110 aa10.53□□□□□ -0.72
PHGDH-229ENST00000641891 TRAV7A0A075B6U4 112 aa10.52□□□□□ -0.72
PHGDH-229ENST00000641891 LINC00474Q9P2X8 69 aa10.52□□□□□ -0.72
PHGDH-229ENST00000641891 A0A1B0GW54 56 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms