RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 CSMD3Q7Z407 3707 aa10.99□□□□□ -0.65
PHGDH-223ENST00000641597 LINC00528Q8N1L1 170 aa10.99□□□□□ -0.65
PHGDH-223ENST00000641597 RPL37AP8A6NKH3 93 aa10.98□□□□□ -0.65
PHGDH-223ENST00000641597 DEFB105AQ8NG35 78 aa10.98□□□□□ -0.65
PHGDH-223ENST00000641597 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-223ENST00000641597 DNAH10Q8IVF4 4471 aa10.97□□□□□ -0.65
PHGDH-223ENST00000641597 TRBV7-4A0A0J9YYF1 115 aa10.96□□□□□ -0.66
PHGDH-223ENST00000641597 LINC00588Q9Y4M8 146 aa10.96□□□□□ -0.66
PHGDH-223ENST00000641597 ATP5EP2Q5VTU8 51 aa10.95□□□□□ -0.66
PHGDH-223ENST00000641597 C7orf33Q8WU49 177 aa10.95□□□□□ -0.66
PHGDH-223ENST00000641597 TRAV10A0A0B4J240 114 aa10.95□□□□□ -0.66
PHGDH-223ENST00000641597 HUWE1Q7Z6Z7 4374 aaKnown RBP10.94□□□□□ -0.66
PHGDH-223ENST00000641597 Q8N9L7 120 aa10.93□□□□□ -0.66
PHGDH-223ENST00000641597 DNAH1Q9P2D7 4330 aa10.92□□□□□ -0.66
PHGDH-223ENST00000641597 DNAH10OSP0CZ25 163 aa10.92□□□□□ -0.66
PHGDH-223ENST00000641597 NKAPP1Q8N9T2 125 aa10.92□□□□□ -0.66
PHGDH-223ENST00000641597 SRRM2Q9UQ35 2752 aaKnown RBP10.92□□□□□ -0.66
PHGDH-223ENST00000641597 KRTAP7-1Q8IUC3 87 aa10.91□□□□□ -0.66
PHGDH-223ENST00000641597 C20orf197Q8N268 126 aa10.9□□□□□ -0.66
PHGDH-223ENST00000641597 TRBV7-6A0A0J9YX20 115 aa10.89□□□□□ -0.67
PHGDH-223ENST00000641597 C3orf84H3BNL1 204 aa10.89□□□□□ -0.67
PHGDH-223ENST00000641597 Q8N377 158 aa10.87□□□□□ -0.67
PHGDH-223ENST00000641597 ST20-AS1Q8NBB2 130 aa10.87□□□□□ -0.67
PHGDH-223ENST00000641597 KCNQ1DNQ9H478 68 aa10.87□□□□□ -0.67
PHGDH-223ENST00000641597 Q9BRP9 147 aa10.86□□□□□ -0.67
PHGDH-223ENST00000641597 FAM19A5Q7Z5A7 132 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-223ENST00000641597 PDE6GP18545 87 aa10.85□□□□□ -0.67
PHGDH-223ENST00000641597 DNAH9Q9NYC9 4486 aa10.84□□□□□ -0.67
PHGDH-223ENST00000641597 OXTP01178 125 aa10.83□□□□□ -0.68
PHGDH-223ENST00000641597 K7EIL1 84 aa10.82□□□□□ -0.68
PHGDH-223ENST00000641597 ERC2-IT1O76042 136 aa10.82□□□□□ -0.68
PHGDH-223ENST00000641597 SNURFQ9Y675 71 aa10.82□□□□□ -0.68
PHGDH-223ENST00000641597 BPY2O14599 106 aa10.81□□□□□ -0.68
PHGDH-223ENST00000641597 CXCL6P80162 114 aa10.81□□□□□ -0.68
PHGDH-223ENST00000641597 TM2D3Q9BRN9 247 aa10.81□□□□□ -0.68
PHGDH-223ENST00000641597 A0A0G2JQZ4 141 aa10.8□□□□□ -0.68
PHGDH-223ENST00000641597 A0A1W2PNN7 141 aa10.8□□□□□ -0.68
PHGDH-223ENST00000641597 IGLV1-50A0A075B6I6 118 aa10.8□□□□□ -0.68
PHGDH-223ENST00000641597 KRTAP4-16G5E9R7 235 aaPredicted RBP10.8□□□□□ -0.68
PHGDH-223ENST00000641597 H3BQ85 93 aa10.8□□□□□ -0.68
PHGDH-223ENST00000641597 Q6ZRX8 168 aa10.8□□□□□ -0.68
PHGDH-223ENST00000641597 DPH3Q96FX2 82 aa10.8□□□□□ -0.68
PHGDH-223ENST00000641597 KRTAP1-5Q9BYS1 174 aa10.8□□□□□ -0.68
PHGDH-223ENST00000641597 DNAH7Q8WXX0 4024 aa10.8□□□□□ -0.68
PHGDH-223ENST00000641597 TMEM258P61165 79 aa10.78□□□□□ -0.68
PHGDH-223ENST00000641597 J3KT08 172 aa10.77□□□□□ -0.68
PHGDH-223ENST00000641597 RMI2Q96E14 147 aa10.77□□□□□ -0.68
PHGDH-223ENST00000641597 TLX1NBP0CAT3 122 aa10.77□□□□□ -0.69
PHGDH-223ENST00000641597 ETDCA0A1B0GVM5 59 aa10.76□□□□□ -0.69
PHGDH-223ENST00000641597 TRAV7A0A075B6U4 112 aa10.75□□□□□ -0.69
PHGDH-223ENST00000641597 IGKV2-24A0A0C4DH68 120 aa10.75□□□□□ -0.69
PHGDH-223ENST00000641597 NREPQ16612 68 aa10.75□□□□□ -0.69
PHGDH-223ENST00000641597 A0A1W2PNM2 257 aa10.74□□□□□ -0.69
PHGDH-223ENST00000641597 F8WDY8 70 aa10.74□□□□□ -0.69
PHGDH-223ENST00000641597 MRPL55Q7Z7F7 128 aaKnown RBP10.74□□□□□ -0.69
PHGDH-223ENST00000641597 IGKV4-1P06312 121 aa10.73□□□□□ -0.69
PHGDH-223ENST00000641597 SPRR1AP35321 89 aa10.72□□□□□ -0.69
PHGDH-223ENST00000641597 UBE2BP63146 152 aa10.72□□□□□ -0.69
PHGDH-223ENST00000641597 IGLV5-48A0A075B6I7 105 aa10.72□□□□□ -0.69
PHGDH-223ENST00000641597 H7BZZ5 65 aa10.72□□□□□ -0.69
PHGDH-223ENST00000641597 PLA2G2DQ9UNK4 145 aa10.71□□□□□ -0.69
PHGDH-223ENST00000641597 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-223ENST00000641597 A0A096LNI7 61 aa10.7□□□□□ -0.7
PHGDH-223ENST00000641597 DHRS4-AS1Q9P1J3 65 aa10.7□□□□□ -0.7
PHGDH-223ENST00000641597 PRYO14603 147 aa10.7□□□□□ -0.7
PHGDH-223ENST00000641597 C1orf137Q5JT78 98 aa10.7□□□□□ -0.7
PHGDH-223ENST00000641597 PRLHP81277 87 aa10.69□□□□□ -0.7
PHGDH-223ENST00000641597 IGLV5-37A0A075B6J1 123 aa10.69□□□□□ -0.7
PHGDH-223ENST00000641597 TNP2Q05952 138 aa10.68□□□□□ -0.7
PHGDH-223ENST00000641597 CHTF8P0CG12 524 aa10.67□□□□□ -0.7
PHGDH-223ENST00000641597 RPS28P62857 69 aaKnown RBP10.66□□□□□ -0.7
PHGDH-223ENST00000641597 F8WEM9 126 aa10.66□□□□□ -0.7
PHGDH-223ENST00000641597 KRTAP11-1Q8IUC1 163 aa10.66□□□□□ -0.7
PHGDH-223ENST00000641597 REG3GQ6UW15 175 aa10.65□□□□□ -0.7
PHGDH-223ENST00000641597 KLKP1Q107X0 134 aa10.64□□□□□ -0.71
PHGDH-223ENST00000641597 FAM236DA0A1B0GTK5 79 aa10.64□□□□□ -0.71
PHGDH-223ENST00000641597 FAM236CP0DP71 79 aa10.64□□□□□ -0.71
PHGDH-223ENST00000641597 FUSP35637 526 aaKnown RBP eCLIP10.64□□□□□ -0.71
PHGDH-223ENST00000641597 SMIM29Q86T20 159 aa10.64□□□□□ -0.71
PHGDH-223ENST00000641597 DEFB116Q30KQ4 102 aa10.63□□□□□ -0.71
PHGDH-223ENST00000641597 PSCAO43653 123 aa10.62□□□□□ -0.71
PHGDH-223ENST00000641597 PLECQ15149 4684 aaKnown RBP10.61□□□□□ -0.71
PHGDH-223ENST00000641597 BCE1O60756 84 aa10.61□□□□□ -0.71
PHGDH-223ENST00000641597 Q8NBF4 154 aa10.61□□□□□ -0.71
PHGDH-223ENST00000641597 HIGD2AQ9BW72 106 aa10.61□□□□□ -0.71
PHGDH-223ENST00000641597 LINC00476Q8WZB0 136 aa10.6□□□□□ -0.71
PHGDH-223ENST00000641597 OCR1Q9BZK8 76 aa10.6□□□□□ -0.71
PHGDH-223ENST00000641597 C4orf26Q17RF5 130 aa10.59□□□□□ -0.71
PHGDH-223ENST00000641597 TMEM254Q8TBM7 123 aa10.59□□□□□ -0.71
PHGDH-223ENST00000641597 FAM30AQ9NZY2 134 aa10.59□□□□□ -0.71
PHGDH-223ENST00000641597 PHF5AQ7RTV0 110 aaKnown RBP10.58□□□□□ -0.72
PHGDH-223ENST00000641597 UBE2DNLQ8IWF7 75 aa10.58□□□□□ -0.72
PHGDH-223ENST00000641597 DSCR10P59022 87 aa10.57□□□□□ -0.72
PHGDH-223ENST00000641597 K7EQZ3 153 aa10.57□□□□□ -0.72
PHGDH-223ENST00000641597 C16orf90A8MZG2 172 aa10.56□□□□□ -0.72
PHGDH-223ENST00000641597 Q5XG85 94 aa10.56□□□□□ -0.72
PHGDH-223ENST00000641597 IGFL1Q6UW32 110 aa10.55□□□□□ -0.72
PHGDH-223ENST00000641597 SPRR4Q96PI1 79 aa10.54□□□□□ -0.72
PHGDH-223ENST00000641597 APLNQ9ULZ1 77 aa10.53□□□□□ -0.72
PHGDH-223ENST00000641597 EPM2AB3EWF7 344 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms