RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 PLA2G2DQ9UNK4 145 aa10.66□□□□□ -0.7
PHGDH-216ENST00000641375 VPS13DQ5THJ4 4388 aa10.65□□□□□ -0.7
PHGDH-216ENST00000641375 TRAV23DV6A0A075B6W5 121 aa10.65□□□□□ -0.71
PHGDH-216ENST00000641375 SERP2Q8N6R1 65 aa10.65□□□□□ -0.71
PHGDH-216ENST00000641375 DNAH10Q8IVF4 4471 aa10.64□□□□□ -0.71
PHGDH-216ENST00000641375 NKAPP1Q8N9T2 125 aa10.64□□□□□ -0.71
PHGDH-216ENST00000641375 Q6ZRN7 208 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-216ENST00000641375 Q5XG85 94 aa10.63□□□□□ -0.71
PHGDH-216ENST00000641375 WWC2-AS2Q96NR7 200 aa10.63□□□□□ -0.71
PHGDH-216ENST00000641375 BAALC-AS2P0C853 105 aa10.62□□□□□ -0.71
PHGDH-216ENST00000641375 DIRC1Q969H9 104 aa10.62□□□□□ -0.71
PHGDH-216ENST00000641375 CYSTM1Q9H1C7 97 aa10.62□□□□□ -0.71
PHGDH-216ENST00000641375 LRCOL1A6NCL2 159 aa10.61□□□□□ -0.71
PHGDH-216ENST00000641375 M0R2N4 97 aa10.61□□□□□ -0.71
PHGDH-216ENST00000641375 ZNF73O43830 326 aaPredicted RBP10.6□□□□□ -0.71
PHGDH-216ENST00000641375 OXTP01178 125 aa10.6□□□□□ -0.71
PHGDH-216ENST00000641375 SERTAD4-AS1Q5TG53 156 aa10.6□□□□□ -0.71
PHGDH-216ENST00000641375 IGLV5-37A0A075B6J1 123 aa10.6□□□□□ -0.71
PHGDH-216ENST00000641375 C4orf26Q17RF5 130 aa10.6□□□□□ -0.71
PHGDH-216ENST00000641375 Q8N814 137 aa10.6□□□□□ -0.71
PHGDH-216ENST00000641375 TRBV7-6A0A0J9YX20 115 aa10.59□□□□□ -0.71
PHGDH-216ENST00000641375 Q6JHZ5 121 aa10.59□□□□□ -0.71
PHGDH-216ENST00000641375 C22orf24Q9Y442 160 aa10.59□□□□□ -0.71
PHGDH-216ENST00000641375 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-216ENST00000641375 TGP01266 2768 aa10.59□□□□□ -0.71
PHGDH-216ENST00000641375 LINC00575Q6W349 94 aa10.58□□□□□ -0.72
PHGDH-216ENST00000641375 C16orf90A8MZG2 172 aa10.58□□□□□ -0.72
PHGDH-216ENST00000641375 HRCT1Q6UXD1 115 aa10.58□□□□□ -0.72
PHGDH-216ENST00000641375 Q6ZR54 194 aa10.58□□□□□ -0.72
PHGDH-216ENST00000641375 LINC00167Q96N53 147 aa10.58□□□□□ -0.72
PHGDH-216ENST00000641375 DSCR8Q96T75 97 aa10.58□□□□□ -0.72
PHGDH-216ENST00000641375 ORMDL1Q9P0S3 153 aa10.58□□□□□ -0.72
PHGDH-216ENST00000641375 PKIGQ9Y2B9 76 aa10.58□□□□□ -0.72
PHGDH-216ENST00000641375 C7orf33Q8WU49 177 aa10.56□□□□□ -0.72
PHGDH-216ENST00000641375 FAM168BA1KXE4 195 aa10.55□□□□□ -0.72
PHGDH-216ENST00000641375 KCNQ1DNQ9H478 68 aa10.55□□□□□ -0.72
PHGDH-216ENST00000641375 COX7BP24311 80 aa10.55□□□□□ -0.72
PHGDH-216ENST00000641375 ELOF1P60002 83 aaKnown RBP10.55□□□□□ -0.72
PHGDH-216ENST00000641375 C9orf163Q8N9P6 203 aa10.54□□□□□ -0.72
PHGDH-216ENST00000641375 A0A096LNI7 61 aa10.53□□□□□ -0.72
PHGDH-216ENST00000641375 LY6G6CO95867 125 aa10.53□□□□□ -0.72
PHGDH-216ENST00000641375 MRPL55Q7Z7F7 128 aaKnown RBP10.52□□□□□ -0.72
PHGDH-216ENST00000641375 TMEM256-PLSCR3K7ERE1 68 aa10.52□□□□□ -0.73
PHGDH-216ENST00000641375 KRTAP7-1Q8IUC3 87 aa10.52□□□□□ -0.73
PHGDH-216ENST00000641375 IGLV1-50A0A075B6I6 118 aa10.51□□□□□ -0.73
PHGDH-216ENST00000641375 IGKV2-24A0A0C4DH68 120 aa10.51□□□□□ -0.73
PHGDH-216ENST00000641375 A0A087WTM6 91 aa10.5□□□□□ -0.73
PHGDH-216ENST00000641375 C3orf84H3BNL1 204 aa10.5□□□□□ -0.73
PHGDH-216ENST00000641375 LINC00476Q8WZB0 136 aa10.5□□□□□ -0.73
PHGDH-216ENST00000641375 PRO0628Q9UI54 55 aa10.5□□□□□ -0.73
PHGDH-216ENST00000641375 KMT2AQ03164 3969 aa10.5□□□□□ -0.73
PHGDH-216ENST00000641375 PRYO14603 147 aa10.5□□□□□ -0.73
PHGDH-216ENST00000641375 C1orf134Q5TEV5 83 aa10.5□□□□□ -0.73
PHGDH-216ENST00000641375 OBSCN-AS1Q96MR7 158 aa10.49□□□□□ -0.73
PHGDH-216ENST00000641375 H3BQ85 93 aa10.49□□□□□ -0.73
PHGDH-216ENST00000641375 RPL37AP8A6NKH3 93 aa10.48□□□□□ -0.73
PHGDH-216ENST00000641375 EPM2AB3EWF7 344 aa10.48□□□□□ -0.73
PHGDH-216ENST00000641375 LINC00528Q8N1L1 170 aa10.48□□□□□ -0.73
PHGDH-216ENST00000641375 LINC00474Q9P2X8 69 aa10.48□□□□□ -0.73
PHGDH-216ENST00000641375 IGKV3D-7A0A0C4DH55 119 aa10.48□□□□□ -0.73
PHGDH-216ENST00000641375 GHRHP01286 108 aa10.47□□□□□ -0.73
PHGDH-216ENST00000641375 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.46□□□□□ -0.73
PHGDH-216ENST00000641375 Q6ZQY7 126 aa10.46□□□□□ -0.73
PHGDH-216ENST00000641375 LINC00846Q9NV44 126 aa10.45□□□□□ -0.74
PHGDH-216ENST00000641375 SPRR1AP35321 89 aa10.45□□□□□ -0.74
PHGDH-216ENST00000641375 A0A087WVE0 104 aa10.44□□□□□ -0.74
PHGDH-216ENST00000641375 A0A1W2PNN7 141 aa10.44□□□□□ -0.74
PHGDH-216ENST00000641375 JMJD7-PLA2G4BH0Y9G9 81 aa10.43□□□□□ -0.74
PHGDH-216ENST00000641375 ETDCA0A1B0GVM5 59 aa10.43□□□□□ -0.74
PHGDH-216ENST00000641375 KRTAP4-16G5E9R7 235 aaPredicted RBP10.43□□□□□ -0.74
PHGDH-216ENST00000641375 ATP5EP2Q5VTU8 51 aa10.43□□□□□ -0.74
PHGDH-216ENST00000641375 SERP1Q9Y6X1 66 aa10.43□□□□□ -0.74
PHGDH-216ENST00000641375 DNAH6Q9C0G6 4158 aa10.43□□□□□ -0.74
PHGDH-216ENST00000641375 CHTF8P0CG12 524 aa10.42□□□□□ -0.74
PHGDH-216ENST00000641375 Q6ZRX8 168 aa10.42□□□□□ -0.74
PHGDH-216ENST00000641375 C14orf132Q9NPU4 83 aa10.42□□□□□ -0.74
PHGDH-216ENST00000641375 DNAH2Q9P225 4427 aa10.41□□□□□ -0.74
PHGDH-216ENST00000641375 FAM236DA0A1B0GTK5 79 aa10.41□□□□□ -0.74
PHGDH-216ENST00000641375 FAM236CP0DP71 79 aa10.41□□□□□ -0.74
PHGDH-216ENST00000641375 REG3GQ6UW15 175 aa10.41□□□□□ -0.74
PHGDH-216ENST00000641375 DHRS4-AS1Q9P1J3 65 aa10.41□□□□□ -0.74
PHGDH-216ENST00000641375 RTL8CO15255 209 aa10.39□□□□□ -0.75
PHGDH-216ENST00000641375 ALMS1Q8TCU4 4167 aa10.39□□□□□ -0.75
PHGDH-216ENST00000641375 BCE1O60756 84 aa10.38□□□□□ -0.75
PHGDH-216ENST00000641375 LINC00336Q6ZUF6 198 aa10.38□□□□□ -0.75
PHGDH-216ENST00000641375 LAMTOR3Q9UHA4 124 aa10.38□□□□□ -0.75
PHGDH-216ENST00000641375 SPACA4Q8TDM5 124 aa10.36□□□□□ -0.75
PHGDH-216ENST00000641375 HECTD4Q9Y4D8 3996 aa10.35□□□□□ -0.75
PHGDH-216ENST00000641375 IGLV5-52A0A0A0MRZ9 124 aa10.35□□□□□ -0.75
PHGDH-216ENST00000641375 CCKP06307 115 aa10.35□□□□□ -0.75
PHGDH-216ENST00000641375 UBE2BP63146 152 aa10.35□□□□□ -0.75
PHGDH-216ENST00000641375 PHF5AQ7RTV0 110 aaKnown RBP10.35□□□□□ -0.75
PHGDH-216ENST00000641375 Q9BRP9 147 aa10.35□□□□□ -0.75
PHGDH-216ENST00000641375 RBM3P98179 157 aaKnown RBP10.34□□□□□ -0.75
PHGDH-216ENST00000641375 PANO1I0J062 215 aa10.33□□□□□ -0.76
PHGDH-216ENST00000641375 SMIM26A0A096LP01 95 aa10.32□□□□□ -0.76
PHGDH-216ENST00000641375 TNP2Q05952 138 aa10.32□□□□□ -0.76
PHGDH-216ENST00000641375 C20orf197Q8N268 126 aa10.32□□□□□ -0.76
PHGDH-216ENST00000641375 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.32□□□□□ -0.76
PHGDH-216ENST00000641375 H7BZZ5 65 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms