RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 IGKV2-29A2NJV5 120 aaPredicted RBP4.33□□□□□ -1.72
SCARB2-224ENST00000640880 FAM236CP0DP71 79 aa4.33□□□□□ -1.72
SCARB2-224ENST00000640880 COX6A2Q02221 97 aa4.33□□□□□ -1.72
SCARB2-224ENST00000640880 C4orf26Q17RF5 130 aa4.33□□□□□ -1.72
SCARB2-224ENST00000640880 DEFB136Q30KP8 78 aa4.33□□□□□ -1.72
SCARB2-224ENST00000640880 RNASE13Q5GAN3 156 aaKnown RBP4.33□□□□□ -1.72
SCARB2-224ENST00000640880 HRCT1Q6UXD1 115 aa4.33□□□□□ -1.72
SCARB2-224ENST00000640880 LINC00167Q96N53 147 aa4.33□□□□□ -1.72
SCARB2-224ENST00000640880 C14orf132Q9NPU4 83 aa4.33□□□□□ -1.72
SCARB2-224ENST00000640880 C8orf17Q9NRJ1 99 aa4.33□□□□□ -1.72
SCARB2-224ENST00000640880 IGKV3-7A0A075B6H7 116 aa4.32□□□□□ -1.72
SCARB2-224ENST00000640880 TRBV10-1A0A0K0K1A3 114 aa4.32□□□□□ -1.72
SCARB2-224ENST00000640880 BPY2O14599 106 aa4.32□□□□□ -1.72
SCARB2-224ENST00000640880 ATP5EP56381 51 aaPredicted RBP4.32□□□□□ -1.72
SCARB2-224ENST00000640880 SPINK13Q1W4C9 94 aa4.32□□□□□ -1.72
SCARB2-224ENST00000640880 SMIM11BQ8TCY0 68 aa4.32□□□□□ -1.72
SCARB2-224ENST00000640880 SND1-IT1Q9HBX3 110 aa4.32□□□□□ -1.72
SCARB2-224ENST00000640880 ORMDL1Q9P0S3 153 aa4.32□□□□□ -1.72
SCARB2-224ENST00000640880 WNK1Q9H4A3 2382 aa4.32□□□□□ -1.72
SCARB2-224ENST00000640880 IGKV2-28A0A075B6P5 120 aa4.31□□□□□ -1.72
SCARB2-224ENST00000640880 TRAV7A0A075B6U4 112 aa4.31□□□□□ -1.72
SCARB2-224ENST00000640880 IBA57-AS1B1ANH7 110 aa4.31□□□□□ -1.72
SCARB2-224ENST00000640880 NDUFC1O43677 76 aa4.31□□□□□ -1.72
SCARB2-224ENST00000640880 IGKV2D-28P01615 120 aa4.31□□□□□ -1.72
SCARB2-224ENST00000640880 XCL1P47992 114 aa4.31□□□□□ -1.72
SCARB2-224ENST00000640880 DEFB116Q30KQ4 102 aa4.31□□□□□ -1.72
SCARB2-224ENST00000640880 LINC00337Q8N6G1 96 aa4.31□□□□□ -1.72
SCARB2-224ENST00000640880 DYNLRB2Q8TF09 96 aa4.31□□□□□ -1.72
SCARB2-224ENST00000640880 COL6A5A8TX70 2615 aa4.3□□□□□ -1.72
SCARB2-224ENST00000640880 FBN1P35555 2871 aaKnown RBP4.3□□□□□ -1.72
SCARB2-224ENST00000640880 A0A087WVE0 104 aa4.3□□□□□ -1.72
SCARB2-224ENST00000640880 IGHV3-73A0A0B4J1V6 119 aa4.3□□□□□ -1.72
SCARB2-224ENST00000640880 H3BQ85 93 aa4.3□□□□□ -1.72
SCARB2-224ENST00000640880 KLKP1Q107X0 134 aa4.3□□□□□ -1.72
SCARB2-224ENST00000640880 COX7B2Q8TF08 81 aa4.3□□□□□ -1.72
SCARB2-224ENST00000640880 CDC42SE2Q9NRR3 84 aa4.3□□□□□ -1.72
SCARB2-224ENST00000640880 KNCNA6PVL3 124 aa4.29□□□□□ -1.72
SCARB2-224ENST00000640880 TMEM256-PLSCR3K7ERE1 68 aa4.29□□□□□ -1.72
SCARB2-224ENST00000640880 LECT2O14960 151 aa4.29□□□□□ -1.72
SCARB2-224ENST00000640880 MIR7-3HGQ8N6C7 128 aa4.29□□□□□ -1.72
SCARB2-224ENST00000640880 WFDC9Q8NEX5 89 aa4.29□□□□□ -1.72
SCARB2-224ENST00000640880 UBL5Q9BZL1 73 aa4.29□□□□□ -1.72
SCARB2-224ENST00000640880 TRBV6-4A0A1B0GX49 114 aa4.28□□□□□ -1.72
SCARB2-224ENST00000640880 H7BZZ5 65 aa4.28□□□□□ -1.72
SCARB2-224ENST00000640880 KRTAP1-4P0C5Y4 121 aa4.28□□□□□ -1.72
SCARB2-224ENST00000640880 CCL18P55774 89 aa4.28□□□□□ -1.72
SCARB2-224ENST00000640880 LOC110117498A0A087WWA1 95 aa4.27□□□□□ -1.73
SCARB2-224ENST00000640880 NCR3O14931 201 aa4.27□□□□□ -1.73
SCARB2-224ENST00000640880 LINC00158P58513 81 aa4.27□□□□□ -1.73
SCARB2-224ENST00000640880 SS18Q15532 418 aa4.27□□□□□ -1.73
SCARB2-224ENST00000640880 C20orf197Q8N268 126 aa4.27□□□□□ -1.73
SCARB2-224ENST00000640880 CIRBP-AS1Q8TBR5 109 aa4.27□□□□□ -1.73
SCARB2-224ENST00000640880 STAB1Q9NY15 2570 aa4.27□□□□□ -1.73
SCARB2-224ENST00000640880 TRAV23DV6A0A075B6W5 121 aa4.26□□□□□ -1.73
SCARB2-224ENST00000640880 PDE6GP18545 87 aa4.26□□□□□ -1.73
SCARB2-224ENST00000640880 ENHOQ6UWT2 76 aa4.26□□□□□ -1.73
SCARB2-224ENST00000640880 Q8N814 137 aa4.26□□□□□ -1.73
SCARB2-224ENST00000640880 UBE2L6O14933 153 aa4.25□□□□□ -1.73
SCARB2-224ENST00000640880 ERC2-IT1O76042 136 aa4.25□□□□□ -1.73
SCARB2-224ENST00000640880 CELA1Q9UNI1 258 aa4.25□□□□□ -1.73
SCARB2-224ENST00000640880 IGLV1-51P01701 117 aa4.24□□□□□ -1.73
SCARB2-224ENST00000640880 DEFB131AP59861 70 aa4.24□□□□□ -1.73
SCARB2-224ENST00000640880 HTN1P15515 57 aa4.23□□□□□ -1.73
SCARB2-224ENST00000640880 CMC4P56277 68 aaPredicted RBP4.23□□□□□ -1.73
SCARB2-224ENST00000640880 COX17Q14061 63 aa4.23□□□□□ -1.73
SCARB2-224ENST00000640880 KPRPQ5T749 579 aaPredicted RBP4.23□□□□□ -1.73
SCARB2-224ENST00000640880 Q6ZQT0 140 aa4.23□□□□□ -1.73
SCARB2-224ENST00000640880 FP248Q71RG6 208 aaPredicted RBP4.23□□□□□ -1.73
SCARB2-224ENST00000640880 MUC7Q8TAX7 377 aa4.23□□□□□ -1.73
SCARB2-224ENST00000640880 RBM12B-AS1Q9P1G2 102 aa4.23□□□□□ -1.73
SCARB2-224ENST00000640880 SORL1Q92673 2214 aa4.23□□□□□ -1.73
SCARB2-224ENST00000640880 TRBV7-6A0A0J9YX20 115 aa4.22□□□□□ -1.73
SCARB2-224ENST00000640880 RBM3P98179 157 aaKnown RBP4.22□□□□□ -1.73
SCARB2-224ENST00000640880 DEFB114Q30KQ6 69 aa4.22□□□□□ -1.73
SCARB2-224ENST00000640880 Q8IZM0 81 aa4.22□□□□□ -1.73
SCARB2-224ENST00000640880 ANAPC11Q9NYG5 84 aa4.22□□□□□ -1.73
SCARB2-224ENST00000640880 LAMTOR3Q9UHA4 124 aa4.22□□□□□ -1.73
SCARB2-224ENST00000640880 TENM1Q9UKZ4 2725 aa4.21□□□□□ -1.74
SCARB2-224ENST00000640880 PRB2P02812 416 aaPredicted RBP4.21□□□□□ -1.74
SCARB2-224ENST00000640880 TOMM7Q9P0U1 55 aa4.21□□□□□ -1.74
SCARB2-224ENST00000640880 NACAE9PAV3 2078 aa4.2□□□□□ -1.74
SCARB2-224ENST00000640880 TRGV1A0A0A0MS02 117 aa4.2□□□□□ -1.74
SCARB2-224ENST00000640880 F8WEM9 126 aa4.2□□□□□ -1.74
SCARB2-224ENST00000640880 MIFP14174 115 aa4.2□□□□□ -1.74
SCARB2-224ENST00000640880 Q5W150 140 aa4.2□□□□□ -1.74
SCARB2-224ENST00000640880 LINC00575Q6W349 94 aa4.2□□□□□ -1.74
SCARB2-224ENST00000640880 TRBV7-4A0A0J9YYF1 115 aa4.19□□□□□ -1.74
SCARB2-224ENST00000640880 K7EIL1 84 aa4.19□□□□□ -1.74
SCARB2-224ENST00000640880 KRTAP10-7P60409 375 aaPredicted RBP4.19□□□□□ -1.74
SCARB2-224ENST00000640880 KRTAP10-12P60413 245 aa4.19□□□□□ -1.74
SCARB2-224ENST00000640880 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
SCARB2-224ENST00000640880 C1orf195Q5TG92 126 aa4.19□□□□□ -1.74
SCARB2-224ENST00000640880 C1orf158Q8N1D5 194 aa4.19□□□□□ -1.74
SCARB2-224ENST00000640880 TRBV6-8A0A0A6YYG3 113 aa4.18□□□□□ -1.74
SCARB2-224ENST00000640880 TRAV10A0A0B4J240 114 aa4.18□□□□□ -1.74
SCARB2-224ENST00000640880 LINC00959A0A1B0GUT2 108 aa4.18□□□□□ -1.74
SCARB2-224ENST00000640880 NREPQ16612 68 aa4.18□□□□□ -1.74
SCARB2-224ENST00000640880 RMI2Q96E14 147 aa4.18□□□□□ -1.74
SCARB2-224ENST00000640880 NOTCH3Q9UM47 2321 aa4.18□□□□□ -1.74
SCARB2-224ENST00000640880 PRM2P04554 102 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 210 ms