RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 HRCT1Q6UXD1 115 aa13.22□□□□□ -0.29
SYNGAP1-227ENST00000638142 SNURFQ9Y675 71 aa13.21□□□□□ -0.29
SYNGAP1-227ENST00000638142 SCXQ7RTU7 201 aa13.21□□□□□ -0.29
SYNGAP1-227ENST00000638142 RMI2Q96E14 147 aa13.21□□□□□ -0.29
SYNGAP1-227ENST00000638142 SYCNQ0VAF6 134 aa13.2□□□□□ -0.3
SYNGAP1-227ENST00000638142 IGKV2D-24A0A075B6R9 120 aa13.2□□□□□ -0.3
SYNGAP1-227ENST00000638142 TRRAPQ9Y4A5 3859 aa13.2□□□□□ -0.3
SYNGAP1-227ENST00000638142 NDUFC1O43677 76 aa13.19□□□□□ -0.3
SYNGAP1-227ENST00000638142 KCNQ1DNQ9H478 68 aa13.19□□□□□ -0.3
SYNGAP1-227ENST00000638142 TM2D3Q9BRN9 247 aa13.18□□□□□ -0.3
SYNGAP1-227ENST00000638142 F8WEM9 126 aa13.17□□□□□ -0.3
SYNGAP1-227ENST00000638142 NKAPP1Q8N9T2 125 aa13.17□□□□□ -0.3
SYNGAP1-227ENST00000638142 OXLD1Q5BKU9 147 aa13.16□□□□□ -0.3
SYNGAP1-227ENST00000638142 KRTAP10-11P60412 298 aa13.15□□□□□ -0.3
SYNGAP1-227ENST00000638142 NREPQ16612 68 aa13.14□□□□□ -0.31
SYNGAP1-227ENST00000638142 ERC2-IT1O76042 136 aa13.13□□□□□ -0.31
SYNGAP1-227ENST00000638142 C7orf33Q8WU49 177 aa13.13□□□□□ -0.31
SYNGAP1-227ENST00000638142 DEFB131BA0A096LNP1 70 aa13.13□□□□□ -0.31
SYNGAP1-227ENST00000638142 BPY2O14599 106 aa13.13□□□□□ -0.31
SYNGAP1-227ENST00000638142 SERTAD4-AS1Q5TG53 156 aa13.12□□□□□ -0.31
SYNGAP1-227ENST00000638142 ATP5EP56381 51 aaPredicted RBP13.12□□□□□ -0.31
SYNGAP1-227ENST00000638142 TLX1NBP0CAT3 122 aa13.11□□□□□ -0.31
SYNGAP1-227ENST00000638142 Q8N377 158 aa13.1□□□□□ -0.31
SYNGAP1-227ENST00000638142 PLA2G2DQ9UNK4 145 aa13.1□□□□□ -0.31
SYNGAP1-227ENST00000638142 DNAH10OSP0CZ25 163 aa13.1□□□□□ -0.31
SYNGAP1-227ENST00000638142 IGLV5-48A0A075B6I7 105 aa13.09□□□□□ -0.31
SYNGAP1-227ENST00000638142 SMIM26A0A096LP01 95 aa13.09□□□□□ -0.31
SYNGAP1-227ENST00000638142 IGKV4-1P06312 121 aa13.08□□□□□ -0.31
SYNGAP1-227ENST00000638142 C11orf45Q8TAV5 145 aa13.08□□□□□ -0.32
SYNGAP1-227ENST00000638142 TMEM254Q8TBM7 123 aa13.08□□□□□ -0.32
SYNGAP1-227ENST00000638142 DHRS4-AS1Q9P1J3 65 aa13.08□□□□□ -0.32
SYNGAP1-227ENST00000638142 DEFB105AQ8NG35 78 aa13.07□□□□□ -0.32
SYNGAP1-227ENST00000638142 Q6ZRX8 168 aa13.05□□□□□ -0.32
SYNGAP1-227ENST00000638142 Q8N9L7 120 aa13.05□□□□□ -0.32
SYNGAP1-227ENST00000638142 A0A1B0GW54 56 aa13.05□□□□□ -0.32
SYNGAP1-227ENST00000638142 C3orf84H3BNL1 204 aa13.05□□□□□ -0.32
SYNGAP1-227ENST00000638142 PRYO14603 147 aa13.04□□□□□ -0.32
SYNGAP1-227ENST00000638142 IGLV5-37A0A075B6J1 123 aa13.04□□□□□ -0.32
SYNGAP1-227ENST00000638142 FP248Q71RG6 208 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-227ENST00000638142 OCR1Q9BZK8 76 aa13.03□□□□□ -0.32
SYNGAP1-227ENST00000638142 KRTAP4-16G5E9R7 235 aaPredicted RBP13.03□□□□□ -0.32
SYNGAP1-227ENST00000638142 MRAPQ8TCY5 172 aa13.02□□□□□ -0.32
SYNGAP1-227ENST00000638142 PKD1L1Q8TDX9 2849 aa13.02□□□□□ -0.32
SYNGAP1-227ENST00000638142 FUSP35637 526 aaKnown RBP eCLIP13.02□□□□□ -0.33
SYNGAP1-227ENST00000638142 IGLV1-50A0A075B6I6 118 aa13.01□□□□□ -0.33
SYNGAP1-227ENST00000638142 SPRR1AP35321 89 aa13.01□□□□□ -0.33
SYNGAP1-227ENST00000638142 Q9BRP9 147 aa13□□□□□ -0.33
SYNGAP1-227ENST00000638142 A0A0U1RQV1 116 aa12.99□□□□□ -0.33
SYNGAP1-227ENST00000638142 ETDCA0A1B0GVM5 59 aa12.99□□□□□ -0.33
SYNGAP1-227ENST00000638142 RPL37AP8A6NKH3 93 aa12.99□□□□□ -0.33
SYNGAP1-227ENST00000638142 TNP2Q05952 138 aa12.98□□□□□ -0.33
SYNGAP1-227ENST00000638142 FAM168BA1KXE4 195 aa12.97□□□□□ -0.33
SYNGAP1-227ENST00000638142 TENM3Q9P273 2699 aa12.96□□□□□ -0.33
SYNGAP1-227ENST00000638142 A0A1W2PNM2 257 aa12.96□□□□□ -0.34
SYNGAP1-227ENST00000638142 LINC00336Q6ZUF6 198 aa12.96□□□□□ -0.34
SYNGAP1-227ENST00000638142 C1orf137Q5JT78 98 aa12.95□□□□□ -0.34
SYNGAP1-227ENST00000638142 LINC00588Q9Y4M8 146 aa12.95□□□□□ -0.34
SYNGAP1-227ENST00000638142 PRO0628Q9UI54 55 aa12.94□□□□□ -0.34
SYNGAP1-227ENST00000638142 Q8NBF4 154 aa12.93□□□□□ -0.34
SYNGAP1-227ENST00000638142 CASC10Q5T4H9 136 aa12.93□□□□□ -0.34
SYNGAP1-227ENST00000638142 KRTAP7-1Q8IUC3 87 aa12.93□□□□□ -0.34
SYNGAP1-227ENST00000638142 ST20-AS1Q8NBB2 130 aa12.92□□□□□ -0.34
SYNGAP1-227ENST00000638142 LINC00474Q9P2X8 69 aa12.92□□□□□ -0.34
SYNGAP1-227ENST00000638142 ANK2Q01484 3957 aa12.92□□□□□ -0.34
SYNGAP1-227ENST00000638142 MRPL55Q7Z7F7 128 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-227ENST00000638142 SPRR4Q96PI1 79 aa12.9□□□□□ -0.34
SYNGAP1-227ENST00000638142 HIGD2AQ9BW72 106 aa12.86□□□□□ -0.35
SYNGAP1-227ENST00000638142 UBE2BP63146 152 aa12.86□□□□□ -0.35
SYNGAP1-227ENST00000638142 KRTAP24-1Q3LI83 254 aa12.86□□□□□ -0.35
SYNGAP1-227ENST00000638142 SMIM29Q86T20 159 aa12.85□□□□□ -0.35
SYNGAP1-227ENST00000638142 LCE6AA0A183 80 aa12.84□□□□□ -0.35
SYNGAP1-227ENST00000638142 REG3GQ6UW15 175 aa12.84□□□□□ -0.35
SYNGAP1-227ENST00000638142 FAM229BQ4G0N7 80 aa12.83□□□□□ -0.36
SYNGAP1-227ENST00000638142 FAM30AQ9NZY2 134 aa12.81□□□□□ -0.36
SYNGAP1-227ENST00000638142 CMYA5Q8N3K9 4069 aa12.8□□□□□ -0.36
SYNGAP1-227ENST00000638142 DSCR10P59022 87 aa12.8□□□□□ -0.36
SYNGAP1-227ENST00000638142 DNAH3Q8TD57 4116 aa12.79□□□□□ -0.36
SYNGAP1-227ENST00000638142 DNAH1Q9P2D7 4330 aa12.79□□□□□ -0.36
SYNGAP1-227ENST00000638142 LINC00476Q8WZB0 136 aa12.77□□□□□ -0.37
SYNGAP1-227ENST00000638142 K7EQZ3 153 aa12.76□□□□□ -0.37
SYNGAP1-227ENST00000638142 MPLKIPQ8TAP9 179 aa12.73□□□□□ -0.37
SYNGAP1-227ENST00000638142 ZCCHC13Q8WW36 166 aaKnown RBP12.73□□□□□ -0.37
SYNGAP1-227ENST00000638142 STAB1Q9NY15 2570 aa12.72□□□□□ -0.37
SYNGAP1-227ENST00000638142 IGFL1Q6UW32 110 aa12.71□□□□□ -0.37
SYNGAP1-227ENST00000638142 C16orf90A8MZG2 172 aa12.7□□□□□ -0.38
SYNGAP1-227ENST00000638142 COL6A5A8TX70 2615 aa12.7□□□□□ -0.38
SYNGAP1-227ENST00000638142 FBN1P35555 2871 aaKnown RBP12.7□□□□□ -0.38
SYNGAP1-227ENST00000638142 IGLV8-61A0A075B6I0 122 aa12.69□□□□□ -0.38
SYNGAP1-227ENST00000638142 A0A096LNI7 61 aa12.69□□□□□ -0.38
SYNGAP1-227ENST00000638142 hDV103S1A0JD37 113 aa12.69□□□□□ -0.38
SYNGAP1-227ENST00000638142 HCG22E2RYF7 251 aa12.69□□□□□ -0.38
SYNGAP1-227ENST00000638142 PSCAO43653 123 aa12.68□□□□□ -0.38
SYNGAP1-227ENST00000638142 CNBPP62633 177 aaKnown RBP12.68□□□□□ -0.38
SYNGAP1-227ENST00000638142 BRK1Q8WUW1 75 aa12.68□□□□□ -0.38
SYNGAP1-227ENST00000638142 PRB2P02812 416 aaPredicted RBP12.67□□□□□ -0.38
SYNGAP1-227ENST00000638142 PRLHP81277 87 aa12.67□□□□□ -0.38
SYNGAP1-227ENST00000638142 IGKV2-24A0A0C4DH68 120 aa12.65□□□□□ -0.38
SYNGAP1-227ENST00000638142 A0A1W2PNN7 141 aa12.65□□□□□ -0.38
SYNGAP1-227ENST00000638142 NOTCH1P46531 2555 aa12.64□□□□□ -0.39
SYNGAP1-227ENST00000638142 A0A0G2JQZ4 141 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 169.2 ms