RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 LINC00528Q8N1L1 170 aa9.83□□□□□ -0.84
SCN8A-214ENST00000637709 SDIM1Q6ZPB5 146 aa9.83□□□□□ -0.84
SCN8A-214ENST00000637709 DNAH2Q9P225 4427 aa9.83□□□□□ -0.84
SCN8A-214ENST00000637709 ACYP1P07311 99 aa9.82□□□□□ -0.84
SCN8A-214ENST00000637709 C3orf22Q8N5N4 141 aa9.82□□□□□ -0.84
SCN8A-214ENST00000637709 VPS13DQ5THJ4 4388 aa9.82□□□□□ -0.84
SCN8A-214ENST00000637709 F8WDY8 70 aa9.81□□□□□ -0.84
SCN8A-214ENST00000637709 LOC107984640A0A0U1RRK4 108 aa9.81□□□□□ -0.84
SCN8A-214ENST00000637709 A0A1W2PNN7 141 aa9.8□□□□□ -0.84
SCN8A-214ENST00000637709 NUPR2A6NF83 97 aa9.8□□□□□ -0.84
SCN8A-214ENST00000637709 CCKP06307 115 aa9.8□□□□□ -0.84
SCN8A-214ENST00000637709 RBM3P98179 157 aaKnown RBP9.8□□□□□ -0.84
SCN8A-214ENST00000637709 KCNQ1DNQ9H478 68 aa9.8□□□□□ -0.84
SCN8A-214ENST00000637709 NBDYA0A0U1RRE5 68 aa9.8□□□□□ -0.84
SCN8A-214ENST00000637709 JMJD7-PLA2G4BH0Y9G9 81 aa9.8□□□□□ -0.84
SCN8A-214ENST00000637709 MRPL55Q7Z7F7 128 aaKnown RBP9.8□□□□□ -0.84
SCN8A-214ENST00000637709 IGLV1-50A0A075B6I6 118 aa9.79□□□□□ -0.84
SCN8A-214ENST00000637709 ST20-AS1Q8NBB2 130 aa9.78□□□□□ -0.84
SCN8A-214ENST00000637709 Q9BRP9 147 aa9.78□□□□□ -0.84
SCN8A-214ENST00000637709 LINC00643Q86TS7 51 aa9.78□□□□□ -0.84
SCN8A-214ENST00000637709 ANAPC13Q9BS18 74 aa9.78□□□□□ -0.84
SCN8A-214ENST00000637709 NHLRC4P0CG21 123 aaPredicted RBP9.77□□□□□ -0.85
SCN8A-214ENST00000637709 NDUFV3P56181 108 aaKnown RBP9.77□□□□□ -0.85
SCN8A-214ENST00000637709 HECTD4Q9Y4D8 3996 aa9.76□□□□□ -0.85
SCN8A-214ENST00000637709 A0A087WVE0 104 aa9.76□□□□□ -0.85
SCN8A-214ENST00000637709 ERC2-IT1O76042 136 aa9.76□□□□□ -0.85
SCN8A-214ENST00000637709 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.76□□□□□ -0.85
SCN8A-214ENST00000637709 Q6ZQT0 140 aa9.76□□□□□ -0.85
SCN8A-214ENST00000637709 FAM236AA0A1B0GUQ0 79 aa9.75□□□□□ -0.85
SCN8A-214ENST00000637709 FAM236BA0A1B0GV22 79 aa9.75□□□□□ -0.85
SCN8A-214ENST00000637709 ETDCA0A1B0GVM5 59 aa9.75□□□□□ -0.85
SCN8A-214ENST00000637709 PANO1I0J062 215 aa9.75□□□□□ -0.85
SCN8A-214ENST00000637709 DSCR8Q96T75 97 aa9.75□□□□□ -0.85
SCN8A-214ENST00000637709 LRCOL1A6NCL2 159 aa9.74□□□□□ -0.85
SCN8A-214ENST00000637709 KRTAP11-1Q8IUC1 163 aa9.74□□□□□ -0.85
SCN8A-214ENST00000637709 TRBV7-6A0A0J9YX20 115 aa9.74□□□□□ -0.85
SCN8A-214ENST00000637709 B5MCH6 92 aa9.74□□□□□ -0.85
SCN8A-214ENST00000637709 PRLHP81277 87 aa9.74□□□□□ -0.85
SCN8A-214ENST00000637709 Q6ZRX8 168 aa9.74□□□□□ -0.85
SCN8A-214ENST00000637709 TRBV7-7A0A0K0K1E9 115 aa9.73□□□□□ -0.85
SCN8A-214ENST00000637709 KRTAP4-16G5E9R7 235 aaPredicted RBP9.73□□□□□ -0.85
SCN8A-214ENST00000637709 PLA2G2DQ9UNK4 145 aa9.73□□□□□ -0.85
SCN8A-214ENST00000637709 C16orf90A8MZG2 172 aa9.73□□□□□ -0.85
SCN8A-214ENST00000637709 CNBPP62633 177 aaKnown RBP9.73□□□□□ -0.85
SCN8A-214ENST00000637709 UBE2BP63146 152 aa9.73□□□□□ -0.85
SCN8A-214ENST00000637709 Q6ZRN7 208 aaPredicted RBP9.73□□□□□ -0.85
SCN8A-214ENST00000637709 PHF5AQ7RTV0 110 aaKnown RBP9.72□□□□□ -0.85
SCN8A-214ENST00000637709 Q8N377 158 aa9.72□□□□□ -0.85
SCN8A-214ENST00000637709 FRAS1Q86XX4 4008 aa9.7□□□□□ -0.86
SCN8A-214ENST00000637709 IGLV5-37A0A075B6J1 123 aa9.7□□□□□ -0.86
SCN8A-214ENST00000637709 DPH3Q96FX2 82 aa9.7□□□□□ -0.86
SCN8A-214ENST00000637709 Q6Q795 121 aa9.7□□□□□ -0.86
SCN8A-214ENST00000637709 REG3GQ6UW15 175 aa9.7□□□□□ -0.86
SCN8A-214ENST00000637709 A0A0G2JQZ4 141 aa9.69□□□□□ -0.86
SCN8A-214ENST00000637709 PRYO14603 147 aa9.69□□□□□ -0.86
SCN8A-214ENST00000637709 HIST1H4AP62805 103 aaKnown RBP9.69□□□□□ -0.86
SCN8A-214ENST00000637709 LINC01547P58512 204 aaPredicted RBP9.68□□□□□ -0.86
SCN8A-214ENST00000637709 SPRR1AP35321 89 aa9.67□□□□□ -0.86
SCN8A-214ENST00000637709 SCXQ7RTU7 201 aa9.67□□□□□ -0.86
SCN8A-214ENST00000637709 DNAH6Q9C0G6 4158 aa9.67□□□□□ -0.86
SCN8A-214ENST00000637709 LOC110117498A0A087WWA1 95 aa9.67□□□□□ -0.86
SCN8A-214ENST00000637709 FAM19A1Q7Z5A9 133 aa9.67□□□□□ -0.86
SCN8A-214ENST00000637709 CCDC179H3BU77 68 aa9.66□□□□□ -0.86
SCN8A-214ENST00000637709 HIGD2AQ9BW72 106 aa9.66□□□□□ -0.86
SCN8A-214ENST00000637709 HYDINQ4G0P3 5121 aa9.66□□□□□ -0.86
SCN8A-214ENST00000637709 TRBV7-4A0A0J9YYF1 115 aa9.66□□□□□ -0.86
SCN8A-214ENST00000637709 C3orf84H3BNL1 204 aa9.65□□□□□ -0.86
SCN8A-214ENST00000637709 LY6G6CO95867 125 aa9.65□□□□□ -0.86
SCN8A-214ENST00000637709 HAMPP81172 84 aa9.65□□□□□ -0.86
SCN8A-214ENST00000637709 C9orf163Q8N9P6 203 aa9.65□□□□□ -0.86
SCN8A-214ENST00000637709 C14orf177Q52M58 125 aa9.64□□□□□ -0.87
SCN8A-214ENST00000637709 Q6JHZ5 121 aa9.64□□□□□ -0.87
SCN8A-214ENST00000637709 UBL5Q9BZL1 73 aa9.64□□□□□ -0.87
SCN8A-214ENST00000637709 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.64□□□□□ -0.87
SCN8A-214ENST00000637709 DHRS4-AS1Q9P1J3 65 aa9.63□□□□□ -0.87
SCN8A-214ENST00000637709 Q6ZVQ6 151 aa9.62□□□□□ -0.87
SCN8A-214ENST00000637709 A0A087WTM6 91 aa9.61□□□□□ -0.87
SCN8A-214ENST00000637709 IMUPQ9GZP8 106 aa9.61□□□□□ -0.87
SCN8A-214ENST00000637709 DNAH8Q96JB1 4490 aa9.58□□□□□ -0.88
SCN8A-214ENST00000637709 Q8N9L7 120 aa9.58□□□□□ -0.88
SCN8A-214ENST00000637709 GHRHP01286 108 aa9.57□□□□□ -0.88
SCN8A-214ENST00000637709 DNAH17Q9UFH2 4485 aa9.57□□□□□ -0.88
SCN8A-214ENST00000637709 H3BQ85 93 aa9.57□□□□□ -0.88
SCN8A-214ENST00000637709 EPM2AB3EWF7 344 aa9.56□□□□□ -0.88
SCN8A-214ENST00000637709 Q6ZR54 194 aa9.56□□□□□ -0.88
SCN8A-214ENST00000637709 RTL8CO15255 209 aa9.55□□□□□ -0.88
SCN8A-214ENST00000637709 C1orf137Q5JT78 98 aa9.55□□□□□ -0.88
SCN8A-214ENST00000637709 IGLV5-48A0A075B6I7 105 aa9.54□□□□□ -0.88
SCN8A-214ENST00000637709 PDE6GP18545 87 aa9.54□□□□□ -0.88
SCN8A-214ENST00000637709 SMIM29Q86T20 159 aa9.54□□□□□ -0.88
SCN8A-214ENST00000637709 A0A1W2PNM2 257 aa9.54□□□□□ -0.88
SCN8A-214ENST00000637709 UBE2AP49459 152 aa9.51□□□□□ -0.89
SCN8A-214ENST00000637709 TNP2Q05952 138 aa9.51□□□□□ -0.89
SCN8A-214ENST00000637709 C1orf134Q5TEV5 83 aa9.51□□□□□ -0.89
SCN8A-214ENST00000637709 SPACA4Q8TDM5 124 aa9.51□□□□□ -0.89
SCN8A-214ENST00000637709 DNAH11Q96DT5 4516 aa9.51□□□□□ -0.89
SCN8A-214ENST00000637709 LINC00476Q8WZB0 136 aa9.5□□□□□ -0.89
SCN8A-214ENST00000637709 DNAH5Q8TE73 4624 aa9.5□□□□□ -0.89
SCN8A-214ENST00000637709 IGLV5-52A0A0A0MRZ9 124 aa9.48□□□□□ -0.89
SCN8A-214ENST00000637709 BPY2O14599 106 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms