RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 KRTAP8-1Q8IUC2 63 aa-3.63□□□□□ -2.99
SCN1A-215ENST00000637285 CDC42BPGQ6DT37 1551 aa-3.63□□□□□ -2.99
SCN1A-215ENST00000637285 PHLPP1O60346 1717 aa-3.64□□□□□ -2.99
SCN1A-215ENST00000637285 GRIN2AQ12879 1464 aa-3.64□□□□□ -2.99
SCN1A-215ENST00000637285 UBE2L5PA0A1B0GUS4 154 aa-3.64□□□□□ -2.99
SCN1A-215ENST00000637285 PRO3102Q9H379 93 aa-3.64□□□□□ -2.99
SCN1A-215ENST00000637285 KIF20BQ96Q89 1820 aa-3.65□□□□□ -2.99
SCN1A-215ENST00000637285 C3orf79P0CE67 100 aa-3.65□□□□□ -2.99
SCN1A-215ENST00000637285 LINC00158P58513 81 aa-3.65□□□□□ -2.99
SCN1A-215ENST00000637285 PLXNC1O60486 1568 aa-3.65□□□□□ -2.99
SCN1A-215ENST00000637285 ROBO1Q9Y6N7 1651 aa-3.65□□□□□ -2.99
SCN1A-215ENST00000637285 SAMD9Q5K651 1589 aa-3.66□□□□□ -3
SCN1A-215ENST00000637285 K7EP13 123 aa-3.66□□□□□ -3
SCN1A-215ENST00000637285 APOC2P02655 101 aa-3.66□□□□□ -3
SCN1A-215ENST00000637285 DR1Q01658 176 aa-3.66□□□□□ -3
SCN1A-215ENST00000637285 ATMQ13315 3056 aa-3.67□□□□□ -3
SCN1A-215ENST00000637285 SPENQ96T58 3664 aaKnown RBP-3.67□□□□□ -3
SCN1A-215ENST00000637285 SHPRHQ149N8 1683 aa-3.67□□□□□ -3
SCN1A-215ENST00000637285 PFDN5Q99471 154 aa-3.67□□□□□ -3
SCN1A-215ENST00000637285 RGPD8O14715 1765 aaPredicted RBP-3.67□□□□□ -3
SCN1A-215ENST00000637285 RGPD5Q99666 1765 aa-3.67□□□□□ -3
SCN1A-215ENST00000637285 TNP1P09430 55 aa-3.68□□□□□ -3
SCN1A-215ENST00000637285 MON2Q7Z3U7 1717 aa-3.68□□□□□ -3
SCN1A-215ENST00000637285 TIAM2Q8IVF5 1701 aa-3.68□□□□□ -3
SCN1A-215ENST00000637285 MAGI2Q86UL8 1455 aa-3.68□□□□□ -3
SCN1A-215ENST00000637285 GNG14A0A1W2PPG7 69 aa-3.69□□□□□ -3
SCN1A-215ENST00000637285 ASIPP42127 132 aa-3.69□□□□□ -3
SCN1A-215ENST00000637285 MEIG1Q5JSS6 88 aa-3.69□□□□□ -3
SCN1A-215ENST00000637285 ABCC10Q5T3U5 1492 aa-3.69□□□□□ -3
SCN1A-215ENST00000637285 TNRC6CQ9HCJ0 1690 aaKnown RBP-3.69□□□□□ -3
SCN1A-215ENST00000637285 MGAQ8IWI9 3026 aa-3.7□□□□□ -3
SCN1A-215ENST00000637285 SCAPERQ9BY12 1400 aa-3.7□□□□□ -3
SCN1A-215ENST00000637285 NAP1L6A6NFF2 107 aa-3.71□□□□□ -3
SCN1A-215ENST00000637285 TMEM262E9PQX1 116 aa-3.71□□□□□ -3
SCN1A-215ENST00000637285 COX7BP24311 80 aa-3.71□□□□□ -3
SCN1A-215ENST00000637285 ARPC4P59998 168 aa-3.71□□□□□ -3
SCN1A-215ENST00000637285 RPL38P63173 70 aaKnown RBP-3.71□□□□□ -3
SCN1A-215ENST00000637285 ANP32BQ92688 251 aaKnown RBP-3.71□□□□□ -3
SCN1A-215ENST00000637285 UBR3Q6ZT12 1888 aa-3.71□□□□□ -3
SCN1A-215ENST00000637285 C5P01031 1676 aa-3.71□□□□□ -3
SCN1A-215ENST00000637285 TOPAZ1Q8N9V7 1692 aa-3.71□□□□□ -3
SCN1A-215ENST00000637285 USP32Q8NFA0 1604 aa-3.72□□□□□ -3
SCN1A-215ENST00000637285 CRYM-AS1A6NIL9 109 aa-3.72□□□□□ -3
SCN1A-215ENST00000637285 OOSP1A8MZH6 123 aa-3.72□□□□□ -3
SCN1A-215ENST00000637285 IGLC2P0DOY2 106 aa-3.72□□□□□ -3
SCN1A-215ENST00000637285 IGLC3P0DOY3 106 aa-3.72□□□□□ -3
SCN1A-215ENST00000637285 CUL7Q14999 1698 aa-3.73□□□□□ -3.01
SCN1A-215ENST00000637285 DPH3P1Q9H4G8 78 aa-3.73□□□□□ -3.01
SCN1A-215ENST00000637285 QSER1Q2KHR3 1735 aa-3.73□□□□□ -3.01
SCN1A-215ENST00000637285 LRRC9Q6ZRR7 1453 aa-3.73□□□□□ -3.01
SCN1A-215ENST00000637285 MMP24-AS1A0A0U1RRL7 71 aa-3.74□□□□□ -3.01
SCN1A-215ENST00000637285 ATP5EP56381 51 aaPredicted RBP-3.74□□□□□ -3.01
SCN1A-215ENST00000637285 SERP2Q8N6R1 65 aa-3.74□□□□□ -3.01
SCN1A-215ENST00000637285 LZICQ8WZA0 190 aa-3.74□□□□□ -3.01
SCN1A-215ENST00000637285 C1orf54Q8WWF1 131 aa-3.75□□□□□ -3.01
SCN1A-215ENST00000637285 CGREF1Q99674 301 aa-3.75□□□□□ -3.01
SCN1A-215ENST00000637285 FAM135AQ9P2D6 1515 aa-3.75□□□□□ -3.01
SCN1A-215ENST00000637285 DEFB130BP0DP73 79 aa-3.76□□□□□ -3.01
SCN1A-215ENST00000637285 DEFB130AP0DP74 79 aa-3.76□□□□□ -3.01
SCN1A-215ENST00000637285 WFDC9Q8NEX5 89 aa-3.76□□□□□ -3.01
SCN1A-215ENST00000637285 FAM25AB3EWG3 89 aa-3.77□□□□□ -3.01
SCN1A-215ENST00000637285 FAM25CB3EWG5 89 aa-3.77□□□□□ -3.01
SCN1A-215ENST00000637285 FAM25GB3EWG6 89 aa-3.77□□□□□ -3.01
SCN1A-215ENST00000637285 MAGI3Q5TCQ9 1506 aa-3.79□□□□□ -3.02
SCN1A-215ENST00000637285 CEP170BQ9Y4F5 1589 aaPredicted RBP-3.8□□□□□ -3.02
SCN1A-215ENST00000637285 RGPD3A6NKT7 1758 aaPredicted RBP-3.8□□□□□ -3.02
SCN1A-215ENST00000637285 RGPD4Q7Z3J3 1758 aa-3.8□□□□□ -3.02
SCN1A-215ENST00000637285 FAM24AA6NFZ4 105 aa-3.8□□□□□ -3.02
SCN1A-215ENST00000637285 KTN1Q86UP2 1357 aaKnown RBP-3.8□□□□□ -3.02
SCN1A-215ENST00000637285 WIZO95785 1651 aa-3.81□□□□□ -3.02
SCN1A-215ENST00000637285 TMEM218A2RU14 115 aa-3.81□□□□□ -3.02
SCN1A-215ENST00000637285 IAPPP10997 89 aa-3.81□□□□□ -3.02
SCN1A-215ENST00000637285 PMCHL1Q16048 86 aa-3.82□□□□□ -3.02
SCN1A-215ENST00000637285 DEPDC5O75140 1603 aa-3.82□□□□□ -3.02
SCN1A-215ENST00000637285 BOD1L1Q8NFC6 3051 aa-3.82□□□□□ -3.02
SCN1A-215ENST00000637285 ATP7BP35670 1465 aa-3.83□□□□□ -3.02
SCN1A-215ENST00000637285 TRBV25-1A0A075B6N4 114 aa-3.83□□□□□ -3.02
SCN1A-215ENST00000637285 ZNF436-AS1Q8NC38 126 aaPredicted RBP-3.83□□□□□ -3.02
SCN1A-215ENST00000637285 CACFD1Q9UGQ2 172 aa-3.83□□□□□ -3.02
SCN1A-215ENST00000637285 IFI6P09912 130 aa-3.84□□□□□ -3.02
SCN1A-215ENST00000637285 TIMM8BQ9Y5J9 83 aaPredicted RBP-3.84□□□□□ -3.02
SCN1A-215ENST00000637285 ZNF831Q5JPB2 1677 aa-3.84□□□□□ -3.02
SCN1A-215ENST00000637285 F8WEM9 126 aa-3.85□□□□□ -3.03
SCN1A-215ENST00000637285 ANKRD36CQ5JPF3 1778 aa-3.86□□□□□ -3.03
SCN1A-215ENST00000637285 LYNX1G3V0Z9 82 aa-3.86□□□□□ -3.03
SCN1A-215ENST00000637285 CSMD2Q7Z408 3487 aa-3.86□□□□□ -3.03
SCN1A-215ENST00000637285 NAIPQ13075 1403 aa-3.87□□□□□ -3.03
SCN1A-215ENST00000637285 KRTDAPP60985 99 aa-3.87□□□□□ -3.03
SCN1A-215ENST00000637285 PKD1L3Q7Z443 1732 aa-3.87□□□□□ -3.03
SCN1A-215ENST00000637285 GNG7O60262 68 aa-3.88□□□□□ -3.03
SCN1A-215ENST00000637285 LRRC7Q96NW7 1537 aa-3.89□□□□□ -3.03
SCN1A-215ENST00000637285 FYCO1Q9BQS8 1478 aa-3.89□□□□□ -3.03
SCN1A-215ENST00000637285 D6R8Y8 96 aa-3.89□□□□□ -3.03
SCN1A-215ENST00000637285 MUSTN1Q8IVN3 82 aa-3.89□□□□□ -3.03
SCN1A-215ENST00000637285 GAFA1Q96PS6 74 aa-3.89□□□□□ -3.03
SCN1A-215ENST00000637285 TRGV9Q99603 122 aa-3.89□□□□□ -3.03
SCN1A-215ENST00000637285 LINC00470Q9BZP3 86 aa-3.89□□□□□ -3.03
SCN1A-215ENST00000637285 IGLV5-48A0A075B6I7 105 aa-3.9□□□□□ -3.03
SCN1A-215ENST00000637285 DEFB4AO15263 64 aa-3.9□□□□□ -3.03
SCN1A-215ENST00000637285 SELENOWP63302 87 aa-3.9□□□□□ -3.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms