RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 KRTAP24-1Q3LI83 254 aa11.79□□□□□ -0.52
CACNA1A-225ENST00000636389 LINC00483Q53H64 154 aa11.78□□□□□ -0.52
CACNA1A-225ENST00000636389 CENPFP49454 3210 aa11.77□□□□□ -0.52
CACNA1A-225ENST00000636389 IGLV5-45A0A087WSX0 123 aa11.76□□□□□ -0.53
CACNA1A-225ENST00000636389 KTN1-AS1Q86SY8 53 aa11.76□□□□□ -0.53
CACNA1A-225ENST00000636389 DNAH10OSP0CZ25 163 aa11.75□□□□□ -0.53
CACNA1A-225ENST00000636389 FASNP49327 2511 aaKnown RBP11.75□□□□□ -0.53
CACNA1A-225ENST00000636389 CAMK2N1Q7Z7J9 78 aa11.74□□□□□ -0.53
CACNA1A-225ENST00000636389 Q8N1X5 172 aa11.73□□□□□ -0.53
CACNA1A-225ENST00000636389 ANAPC11Q9NYG5 84 aa11.72□□□□□ -0.53
CACNA1A-225ENST00000636389 LCA10Q71F78 164 aa11.72□□□□□ -0.53
CACNA1A-225ENST00000636389 Q8NAQ8 132 aa11.72□□□□□ -0.53
CACNA1A-225ENST00000636389 C8orf17Q9NRJ1 99 aa11.71□□□□□ -0.53
CACNA1A-225ENST00000636389 A0A1B0GVX0 72 aa11.71□□□□□ -0.54
CACNA1A-225ENST00000636389 IGFL1Q6UW32 110 aa11.69□□□□□ -0.54
CACNA1A-225ENST00000636389 ZNF861PO60384 105 aa11.69□□□□□ -0.54
CACNA1A-225ENST00000636389 PRRC2CQ9Y520 2896 aaKnown RBP11.68□□□□□ -0.54
CACNA1A-225ENST00000636389 PRR15Q8IV56 129 aa11.68□□□□□ -0.54
CACNA1A-225ENST00000636389 LINC00336Q6ZUF6 198 aa11.66□□□□□ -0.54
CACNA1A-225ENST00000636389 LINC01546A6NGU7 62 aa11.65□□□□□ -0.54
CACNA1A-225ENST00000636389 SMCPP49901 116 aaPredicted RBP11.65□□□□□ -0.54
CACNA1A-225ENST00000636389 IGLV1-50A0A075B6I6 118 aa11.64□□□□□ -0.55
CACNA1A-225ENST00000636389 COL4A2P08572 1712 aa11.64□□□□□ -0.55
CACNA1A-225ENST00000636389 A0A0G2JQZ4 141 aa11.64□□□□□ -0.55
CACNA1A-225ENST00000636389 A0A1W2PNN7 141 aa11.64□□□□□ -0.55
CACNA1A-225ENST00000636389 Q6ZSA8 131 aa11.63□□□□□ -0.55
CACNA1A-225ENST00000636389 FAM104AQ969W3 186 aa11.61□□□□□ -0.55
CACNA1A-225ENST00000636389 C15orf56Q8N910 161 aa11.6□□□□□ -0.55
CACNA1A-225ENST00000636389 CEP295Q9C0D2 2601 aa11.59□□□□□ -0.55
CACNA1A-225ENST00000636389 KCNQ1DNQ9H478 68 aa11.53□□□□□ -0.56
CACNA1A-225ENST00000636389 A0A087WTM6 91 aa11.52□□□□□ -0.56
CACNA1A-225ENST00000636389 PRO0461Q9UI25 63 aa11.52□□□□□ -0.57
CACNA1A-225ENST00000636389 WIPF1O43516 503 aa11.52□□□□□ -0.57
CACNA1A-225ENST00000636389 IGLV7-43P04211 117 aa11.52□□□□□ -0.57
CACNA1A-225ENST00000636389 LINC00528Q8N1L1 170 aa11.51□□□□□ -0.57
CACNA1A-225ENST00000636389 KRTAP10-11P60412 298 aa11.5□□□□□ -0.57
CACNA1A-225ENST00000636389 Q1T7F1 81 aa11.49□□□□□ -0.57
CACNA1A-225ENST00000636389 K7EIL1 84 aa11.48□□□□□ -0.57
CACNA1A-225ENST00000636389 Q8N377 158 aa11.48□□□□□ -0.57
CACNA1A-225ENST00000636389 PSORS1C2Q9UIG4 136 aa11.48□□□□□ -0.57
CACNA1A-225ENST00000636389 TLX1NBP0CAT3 122 aa11.47□□□□□ -0.57
CACNA1A-225ENST00000636389 A0A0A0MQY5 61 aa11.47□□□□□ -0.57
CACNA1A-225ENST00000636389 GOLGB1Q14789 3259 aaKnown RBP11.46□□□□□ -0.58
CACNA1A-225ENST00000636389 PRR26Q8N8Z3 221 aa11.44□□□□□ -0.58
CACNA1A-225ENST00000636389 H3BS24 57 aa11.42□□□□□ -0.58
CACNA1A-225ENST00000636389 IGLV7-46A0A075B6I9 117 aa11.39□□□□□ -0.59
CACNA1A-225ENST00000636389 HRES1P13985 223 aa11.39□□□□□ -0.59
CACNA1A-225ENST00000636389 PLA2G2DQ9UNK4 145 aa11.39□□□□□ -0.59
CACNA1A-225ENST00000636389 EPG5Q9HCE0 2579 aa11.38□□□□□ -0.59
CACNA1A-225ENST00000636389 C9orf163Q8N9P6 203 aa11.36□□□□□ -0.59
CACNA1A-225ENST00000636389 KLKP1Q107X0 134 aa11.34□□□□□ -0.59
CACNA1A-225ENST00000636389 A0A1B0GU33 70 aa11.34□□□□□ -0.59
CACNA1A-225ENST00000636389 SPRR4Q96PI1 79 aa11.34□□□□□ -0.59
CACNA1A-225ENST00000636389 S4R3F8 94 aa11.33□□□□□ -0.6
CACNA1A-225ENST00000636389 EP400Q96L91 3159 aa11.32□□□□□ -0.6
CACNA1A-225ENST00000636389 LITAFQ99732 161 aa11.31□□□□□ -0.6
CACNA1A-225ENST00000636389 LINC00612Q8N6U2 182 aa11.27□□□□□ -0.61
CACNA1A-225ENST00000636389 H7BZZ5 65 aa11.26□□□□□ -0.61
CACNA1A-225ENST00000636389 SPANXA2-OT1Q8N9U9 137 aa11.25□□□□□ -0.61
CACNA1A-225ENST00000636389 C10orf142B7Z368 130 aa11.23□□□□□ -0.61
CACNA1A-225ENST00000636389 AKAP13Q12802 2813 aa11.23□□□□□ -0.61
CACNA1A-225ENST00000636389 HECTD1Q9ULT8 2610 aa11.23□□□□□ -0.61
CACNA1A-225ENST00000636389 MGAM2Q2M2H8 2515 aa11.21□□□□□ -0.61
CACNA1A-225ENST00000636389 PRR34Q9NV39 138 aa11.2□□□□□ -0.62
CACNA1A-225ENST00000636389 CASC10Q5T4H9 136 aa11.19□□□□□ -0.62
CACNA1A-225ENST00000636389 R4GN34 69 aa11.19□□□□□ -0.62
CACNA1A-225ENST00000636389 SPINK7P58062 85 aa11.19□□□□□ -0.62
CACNA1A-225ENST00000636389 CSAG1Q6PB30 78 aa11.18□□□□□ -0.62
CACNA1A-225ENST00000636389 C19orf73Q9NVV2 129 aa11.18□□□□□ -0.62
CACNA1A-225ENST00000636389 MAST4O15021 2626 aa11.17□□□□□ -0.62
CACNA1A-225ENST00000636389 EIF4EBP3O60516 100 aaPredicted RBP11.15□□□□□ -0.62
CACNA1A-225ENST00000636389 H1FX-AS1Q4G0G2 97 aa11.15□□□□□ -0.63
CACNA1A-225ENST00000636389 DMAC1Q96GE9 116 aa11.13□□□□□ -0.63
CACNA1A-225ENST00000636389 CEP350Q5VT06 3117 aa11.13□□□□□ -0.63
CACNA1A-225ENST00000636389 TNP2Q05952 138 aa11.12□□□□□ -0.63
CACNA1A-225ENST00000636389 ATRQ13535 2644 aa11.11□□□□□ -0.63
CACNA1A-225ENST00000636389 CNBPP62633 177 aaKnown RBP11.11□□□□□ -0.63
CACNA1A-225ENST00000636389 KRTAP10-3P60369 221 aa11.11□□□□□ -0.63
CACNA1A-225ENST00000636389 PLAC4Q8WY50 150 aa11.1□□□□□ -0.63
CACNA1A-225ENST00000636389 CFAP46Q8IYW2 2715 aa11.08□□□□□ -0.64
CACNA1A-225ENST00000636389 A0A1W2PNM2 257 aa11.08□□□□□ -0.64
CACNA1A-225ENST00000636389 GIG44P09565 113 aaPredicted RBP11.07□□□□□ -0.64
CACNA1A-225ENST00000636389 DNAH12Q6ZR08 3092 aa11.06□□□□□ -0.64
CACNA1A-225ENST00000636389 FLNBO75369 2602 aaKnown RBP11.02□□□□□ -0.64
CACNA1A-225ENST00000636389 UTRNP46939 3433 aa11.02□□□□□ -0.65
CACNA1A-225ENST00000636389 Q5VSD8 79 aa11.01□□□□□ -0.65
CACNA1A-225ENST00000636389 FLNAP21333 2647 aaKnown RBP10.99□□□□□ -0.65
CACNA1A-225ENST00000636389 C5orf42Q9H799 3197 aa10.99□□□□□ -0.65
CACNA1A-225ENST00000636389 ZCCHC13Q8WW36 166 aaKnown RBP10.99□□□□□ -0.65
CACNA1A-225ENST00000636389 SEC61BP60468 96 aaKnown RBP10.96□□□□□ -0.65
CACNA1A-225ENST00000636389 Q75L30 129 aa10.96□□□□□ -0.66
CACNA1A-225ENST00000636389 KLK9Q2XQG4 91 aa10.96□□□□□ -0.66
CACNA1A-225ENST00000636389 PRAC1Q96KF2 57 aa10.95□□□□□ -0.66
CACNA1A-225ENST00000636389 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.95□□□□□ -0.66
CACNA1A-225ENST00000636389 M0QZ58 72 aa10.93□□□□□ -0.66
CACNA1A-225ENST00000636389 NBEAL1Q6ZS30 2694 aa10.93□□□□□ -0.66
CACNA1A-225ENST00000636389 ITPR3Q14573 2671 aa10.92□□□□□ -0.66
CACNA1A-225ENST00000636389 STAB1Q9NY15 2570 aa10.91□□□□□ -0.66
CACNA1A-225ENST00000636389 CENPEQ02224 2701 aa10.9□□□□□ -0.66
CACNA1A-225ENST00000636389 OCR1Q9BZK8 76 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms