RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 DEFB105AQ8NG35 78 aa12.33□□□□□ -0.44
MECP2-218ENST00000629277 EGFEM1PQ0D2K5 195 aa12.32□□□□□ -0.44
MECP2-218ENST00000629277 SERP1Q9Y6X1 66 aa12.32□□□□□ -0.44
MECP2-218ENST00000629277 BPY2O14599 106 aa12.32□□□□□ -0.44
MECP2-218ENST00000629277 KPRPQ5T749 579 aaPredicted RBP12.32□□□□□ -0.44
MECP2-218ENST00000629277 EPM2AB3EWF7 344 aa12.31□□□□□ -0.44
MECP2-218ENST00000629277 NREPQ16612 68 aa12.31□□□□□ -0.44
MECP2-218ENST00000629277 LINC00336Q6ZUF6 198 aa12.31□□□□□ -0.44
MECP2-218ENST00000629277 INAFM1C9JVW0 142 aa12.3□□□□□ -0.44
MECP2-218ENST00000629277 PKIGQ9Y2B9 76 aa12.29□□□□□ -0.44
MECP2-218ENST00000629277 TENM3Q9P273 2699 aa12.29□□□□□ -0.44
MECP2-218ENST00000629277 IGKV4-1P06312 121 aa12.27□□□□□ -0.44
MECP2-218ENST00000629277 Q6ZTC4 211 aa12.27□□□□□ -0.44
MECP2-218ENST00000629277 SERTAD4-AS1Q5TG53 156 aa12.26□□□□□ -0.45
MECP2-218ENST00000629277 ESRGQ1W209 222 aa12.25□□□□□ -0.45
MECP2-218ENST00000629277 TMEM254Q8TBM7 123 aa12.25□□□□□ -0.45
MECP2-218ENST00000629277 FP248Q71RG6 208 aaPredicted RBP12.25□□□□□ -0.45
MECP2-218ENST00000629277 IGKV2D-24A0A075B6R9 120 aa12.25□□□□□ -0.45
MECP2-218ENST00000629277 C1orf195Q5TG92 126 aa12.25□□□□□ -0.45
MECP2-218ENST00000629277 LINC00474Q9P2X8 69 aa12.24□□□□□ -0.45
MECP2-218ENST00000629277 Q8N377 158 aa12.23□□□□□ -0.45
MECP2-218ENST00000629277 RPL37AP8A6NKH3 93 aa12.21□□□□□ -0.45
MECP2-218ENST00000629277 C7orf33Q8WU49 177 aa12.21□□□□□ -0.45
MECP2-218ENST00000629277 SYCNQ0VAF6 134 aa12.19□□□□□ -0.46
MECP2-218ENST00000629277 NKAPP1Q8N9T2 125 aa12.19□□□□□ -0.46
MECP2-218ENST00000629277 OCR1Q9BZK8 76 aa12.19□□□□□ -0.46
MECP2-218ENST00000629277 FAM168BA1KXE4 195 aa12.19□□□□□ -0.46
MECP2-218ENST00000629277 OXLD1Q5BKU9 147 aa12.19□□□□□ -0.46
MECP2-218ENST00000629277 KCNQ1DNQ9H478 68 aa12.18□□□□□ -0.46
MECP2-218ENST00000629277 NDUFC1O43677 76 aa12.17□□□□□ -0.46
MECP2-218ENST00000629277 FAM229BQ4G0N7 80 aa12.16□□□□□ -0.46
MECP2-218ENST00000629277 ST20-AS1Q8NBB2 130 aa12.16□□□□□ -0.46
MECP2-218ENST00000629277 HIGD2AQ9BW72 106 aa12.16□□□□□ -0.46
MECP2-218ENST00000629277 SMIM26A0A096LP01 95 aa12.15□□□□□ -0.47
MECP2-218ENST00000629277 Q9BRP9 147 aa12.15□□□□□ -0.47
MECP2-218ENST00000629277 BAHCC1Q9P281 2608 aa12.15□□□□□ -0.47
MECP2-218ENST00000629277 A0A1W2PNM2 257 aa12.13□□□□□ -0.47
MECP2-218ENST00000629277 IGLV5-48A0A075B6I7 105 aa12.13□□□□□ -0.47
MECP2-218ENST00000629277 A0A0U1RQV1 116 aa12.13□□□□□ -0.47
MECP2-218ENST00000629277 J3QKU1 62 aa12.13□□□□□ -0.47
MECP2-218ENST00000629277 KRTAP10-11P60412 298 aa12.13□□□□□ -0.47
MECP2-218ENST00000629277 FAM30AQ9NZY2 134 aa12.13□□□□□ -0.47
MECP2-218ENST00000629277 H3BNG1 76 aa12.12□□□□□ -0.47
MECP2-218ENST00000629277 PRYO14603 147 aa12.12□□□□□ -0.47
MECP2-218ENST00000629277 SMIM29Q86T20 159 aa12.12□□□□□ -0.47
MECP2-218ENST00000629277 CASC10Q5T4H9 136 aa12.11□□□□□ -0.47
MECP2-218ENST00000629277 F8P00451 2351 aa12.1□□□□□ -0.47
MECP2-218ENST00000629277 FLNBO75369 2602 aaKnown RBP12.1□□□□□ -0.47
MECP2-218ENST00000629277 LINC01556Q5JQF7 62 aa12.1□□□□□ -0.47
MECP2-218ENST00000629277 ERC2-IT1O76042 136 aa12.1□□□□□ -0.47
MECP2-218ENST00000629277 Q6ZRX8 168 aa12.1□□□□□ -0.47
MECP2-218ENST00000629277 KRTAP7-1Q8IUC3 87 aa12.08□□□□□ -0.48
MECP2-218ENST00000629277 DEFB131BA0A096LNP1 70 aa12.08□□□□□ -0.48
MECP2-218ENST00000629277 FUSP35637 526 aaKnown RBP eCLIP12.08□□□□□ -0.48
MECP2-218ENST00000629277 C1orf137Q5JT78 98 aa12.08□□□□□ -0.48
MECP2-218ENST00000629277 MPLKIPQ8TAP9 179 aa12.07□□□□□ -0.48
MECP2-218ENST00000629277 KRTAP4-16G5E9R7 235 aaPredicted RBP12.07□□□□□ -0.48
MECP2-218ENST00000629277 A0A0G2JQZ4 141 aa12.06□□□□□ -0.48
MECP2-218ENST00000629277 A0A1W2PNN7 141 aa12.06□□□□□ -0.48
MECP2-218ENST00000629277 MAST4O15021 2626 aa12.06□□□□□ -0.48
MECP2-218ENST00000629277 FBN1P35555 2871 aaKnown RBP12.05□□□□□ -0.48
MECP2-218ENST00000629277 IGLV1-50A0A075B6I6 118 aa12.05□□□□□ -0.48
MECP2-218ENST00000629277 ETDCA0A1B0GVM5 59 aa12.04□□□□□ -0.48
MECP2-218ENST00000629277 ATP5EP56381 51 aaPredicted RBP12.04□□□□□ -0.48
MECP2-218ENST00000629277 TNP2Q05952 138 aa12.04□□□□□ -0.48
MECP2-218ENST00000629277 DHRS4-AS1Q9P1J3 65 aa12.04□□□□□ -0.48
MECP2-218ENST00000629277 NOTCH1P46531 2555 aa12.01□□□□□ -0.49
MECP2-218ENST00000629277 DNAH1Q9P2D7 4330 aa12.01□□□□□ -0.49
MECP2-218ENST00000629277 C11orf45Q8TAV5 145 aa12.01□□□□□ -0.49
MECP2-218ENST00000629277 BRK1Q8WUW1 75 aa12.01□□□□□ -0.49
MECP2-218ENST00000629277 K7EQZ3 153 aa12□□□□□ -0.49
MECP2-218ENST00000629277 DSCR10P59022 87 aa12□□□□□ -0.49
MECP2-218ENST00000629277 Q8NBF4 154 aa12□□□□□ -0.49
MECP2-218ENST00000629277 STAB1Q9NY15 2570 aa12□□□□□ -0.49
MECP2-218ENST00000629277 SPRR1AP35321 89 aa11.99□□□□□ -0.49
MECP2-218ENST00000629277 CMYA5Q8N3K9 4069 aa11.98□□□□□ -0.49
MECP2-218ENST00000629277 TLX1NBP0CAT3 122 aa11.98□□□□□ -0.49
MECP2-218ENST00000629277 DNAH10OSP0CZ25 163 aa11.98□□□□□ -0.49
MECP2-218ENST00000629277 UBE2BP63146 152 aa11.98□□□□□ -0.49
MECP2-218ENST00000629277 LYSTQ99698 3801 aa11.97□□□□□ -0.49
MECP2-218ENST00000629277 KMT2BQ9UMN6 2715 aaPredicted RBP11.97□□□□□ -0.49
MECP2-218ENST00000629277 LRCOL1A6NCL2 159 aa11.97□□□□□ -0.49
MECP2-218ENST00000629277 DEFB116Q30KQ4 102 aa11.97□□□□□ -0.49
MECP2-218ENST00000629277 DNAH10Q8IVF4 4471 aa11.96□□□□□ -0.5
MECP2-218ENST00000629277 CSMD3Q7Z407 3707 aa11.96□□□□□ -0.5
MECP2-218ENST00000629277 MRPL55Q7Z7F7 128 aaKnown RBP11.95□□□□□ -0.5
MECP2-218ENST00000629277 PLA2G2DQ9UNK4 145 aa11.95□□□□□ -0.5
MECP2-218ENST00000629277 SRRM2Q9UQ35 2752 aaKnown RBP11.95□□□□□ -0.5
MECP2-218ENST00000629277 SPRR4Q96PI1 79 aa11.95□□□□□ -0.5
MECP2-218ENST00000629277 LINC00588Q9Y4M8 146 aa11.95□□□□□ -0.5
MECP2-218ENST00000629277 IGLV5-37A0A075B6J1 123 aa11.92□□□□□ -0.5
MECP2-218ENST00000629277 PMAIP1Q13794 54 aa11.91□□□□□ -0.5
MECP2-218ENST00000629277 LINC00476Q8WZB0 136 aa11.91□□□□□ -0.5
MECP2-218ENST00000629277 LCE6AA0A183 80 aa11.9□□□□□ -0.5
MECP2-218ENST00000629277 PRR4Q16378 134 aa11.89□□□□□ -0.51
MECP2-218ENST00000629277 A0A1B0GW54 56 aa11.89□□□□□ -0.51
MECP2-218ENST00000629277 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.88□□□□□ -0.51
MECP2-218ENST00000629277 REG3GQ6UW15 175 aa11.87□□□□□ -0.51
MECP2-218ENST00000629277 PRLHP81277 87 aa11.87□□□□□ -0.51
MECP2-218ENST00000629277 PSCAO43653 123 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms