RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 SDIM1Q6ZPB5 146 aa8.19□□□□□ -1.1
SYNGAP1-207ENST00000628646 Q8NDZ9 215 aa8.18□□□□□ -1.1
SYNGAP1-207ENST00000628646 IMUPQ9GZP8 106 aa8.18□□□□□ -1.1
SYNGAP1-207ENST00000628646 LINC00474Q9P2X8 69 aa8.18□□□□□ -1.1
SYNGAP1-207ENST00000628646 C6orf48Q9UBA6 75 aa8.18□□□□□ -1.1
SYNGAP1-207ENST00000628646 TRBV10-3A0A0K0K1G6 114 aa8.17□□□□□ -1.1
SYNGAP1-207ENST00000628646 HIST1H4AP62805 103 aaKnown RBP8.17□□□□□ -1.1
SYNGAP1-207ENST00000628646 C9orf129Q5T035 196 aaKnown RBP8.17□□□□□ -1.1
SYNGAP1-207ENST00000628646 C15orf56Q8N910 161 aa8.17□□□□□ -1.1
SYNGAP1-207ENST00000628646 C7orf33Q8WU49 177 aa8.17□□□□□ -1.1
SYNGAP1-207ENST00000628646 C5orf47Q569G3 176 aa8.16□□□□□ -1.1
SYNGAP1-207ENST00000628646 Q6Q795 121 aa8.16□□□□□ -1.1
SYNGAP1-207ENST00000628646 LINC00575Q6W349 94 aa8.15□□□□□ -1.1
SYNGAP1-207ENST00000628646 Q6ZQY7 126 aa8.15□□□□□ -1.1
SYNGAP1-207ENST00000628646 SMCR5Q8TEV8 140 aa8.15□□□□□ -1.11
SYNGAP1-207ENST00000628646 CHTF8P0CG12 524 aa8.14□□□□□ -1.11
SYNGAP1-207ENST00000628646 OBSCN-AS1Q96MR7 158 aa8.14□□□□□ -1.11
SYNGAP1-207ENST00000628646 DHRS4-AS1Q9P1J3 65 aa8.13□□□□□ -1.11
SYNGAP1-207ENST00000628646 TRBV7-6A0A0J9YX20 115 aa8.13□□□□□ -1.11
SYNGAP1-207ENST00000628646 UBE2AP49459 152 aa8.13□□□□□ -1.11
SYNGAP1-207ENST00000628646 RPL37AP8A6NKH3 93 aa8.13□□□□□ -1.11
SYNGAP1-207ENST00000628646 ATP5EP2Q5VTU8 51 aa8.13□□□□□ -1.11
SYNGAP1-207ENST00000628646 Q6ZR54 194 aa8.13□□□□□ -1.11
SYNGAP1-207ENST00000628646 HAMPP81172 84 aa8.12□□□□□ -1.11
SYNGAP1-207ENST00000628646 HUWE1Q7Z6Z7 4374 aaKnown RBP8.12□□□□□ -1.11
SYNGAP1-207ENST00000628646 LRCOL1A6NCL2 159 aa8.12□□□□□ -1.11
SYNGAP1-207ENST00000628646 CCKP06307 115 aa8.11□□□□□ -1.11
SYNGAP1-207ENST00000628646 DEFB105AQ8NG35 78 aa8.11□□□□□ -1.11
SYNGAP1-207ENST00000628646 LINC00167Q96N53 147 aa8.11□□□□□ -1.11
SYNGAP1-207ENST00000628646 A0A0U1RQV1 116 aa8.09□□□□□ -1.11
SYNGAP1-207ENST00000628646 LYSTQ99698 3801 aa8.09□□□□□ -1.11
SYNGAP1-207ENST00000628646 IGKV3D-7A0A0C4DH55 119 aa8.09□□□□□ -1.11
SYNGAP1-207ENST00000628646 TRBV7-7A0A0K0K1E9 115 aa8.09□□□□□ -1.11
SYNGAP1-207ENST00000628646 ATOX1O00244 68 aa8.09□□□□□ -1.11
SYNGAP1-207ENST00000628646 NDUFV3P56181 108 aaKnown RBP8.09□□□□□ -1.11
SYNGAP1-207ENST00000628646 KRTAP26-1Q6PEX3 210 aa8.09□□□□□ -1.11
SYNGAP1-207ENST00000628646 IGLV6-57P01721 117 aa8.09□□□□□ -1.12
SYNGAP1-207ENST00000628646 C9orf163Q8N9P6 203 aa8.09□□□□□ -1.12
SYNGAP1-207ENST00000628646 A0A096LNI7 61 aa8.08□□□□□ -1.12
SYNGAP1-207ENST00000628646 FAM236AA0A1B0GUQ0 79 aa8.08□□□□□ -1.12
SYNGAP1-207ENST00000628646 FAM236BA0A1B0GV22 79 aa8.08□□□□□ -1.12
SYNGAP1-207ENST00000628646 HIGD2AQ9BW72 106 aa8.08□□□□□ -1.12
SYNGAP1-207ENST00000628646 PRYO14603 147 aa8.08□□□□□ -1.12
SYNGAP1-207ENST00000628646 FAM19A1Q7Z5A9 133 aa8.07□□□□□ -1.12
SYNGAP1-207ENST00000628646 Q6JHZ5 121 aa8.07□□□□□ -1.12
SYNGAP1-207ENST00000628646 Q6ZRP5 223 aa8.07□□□□□ -1.12
SYNGAP1-207ENST00000628646 C9orf153Q5TBE3 101 aa8.06□□□□□ -1.12
SYNGAP1-207ENST00000628646 VPREB1P12018 145 aa8.06□□□□□ -1.12
SYNGAP1-207ENST00000628646 NREPQ16612 68 aa8.05□□□□□ -1.12
SYNGAP1-207ENST00000628646 HRCT1Q6UXD1 115 aa8.05□□□□□ -1.12
SYNGAP1-207ENST00000628646 CNBPP62633 177 aaKnown RBP8.03□□□□□ -1.12
SYNGAP1-207ENST00000628646 MRPL55Q7Z7F7 128 aaKnown RBP8.03□□□□□ -1.12
SYNGAP1-207ENST00000628646 ELOF1P60002 83 aaKnown RBP8.03□□□□□ -1.12
SYNGAP1-207ENST00000628646 COL7A1Q02388 2944 aa8.02□□□□□ -1.12
SYNGAP1-207ENST00000628646 TLX1NBP0CAT3 122 aa8.02□□□□□ -1.13
SYNGAP1-207ENST00000628646 SMR3BP02814 79 aaPredicted RBP8.02□□□□□ -1.13
SYNGAP1-207ENST00000628646 C1orf137Q5JT78 98 aa8.02□□□□□ -1.13
SYNGAP1-207ENST00000628646 PHF5AQ7RTV0 110 aaKnown RBP8.02□□□□□ -1.13
SYNGAP1-207ENST00000628646 FAM168BA1KXE4 195 aa8.01□□□□□ -1.13
SYNGAP1-207ENST00000628646 KRTAP10-2P60368 255 aa8.01□□□□□ -1.13
SYNGAP1-207ENST00000628646 DNAH9Q9NYC9 4486 aa8.01□□□□□ -1.13
SYNGAP1-207ENST00000628646 DNAH10Q8IVF4 4471 aa8.01□□□□□ -1.13
SYNGAP1-207ENST00000628646 PLA2G2DQ9UNK4 145 aa8□□□□□ -1.13
SYNGAP1-207ENST00000628646 DYNC2H1Q8NCM8 4307 aaKnown RBP7.99□□□□□ -1.13
SYNGAP1-207ENST00000628646 REG3GQ6UW15 175 aa7.99□□□□□ -1.13
SYNGAP1-207ENST00000628646 Q6ZRN7 208 aaPredicted RBP7.99□□□□□ -1.13
SYNGAP1-207ENST00000628646 LINC00846Q9NV44 126 aa7.98□□□□□ -1.13
SYNGAP1-207ENST00000628646 FAM229AH3BQW9 127 aa7.98□□□□□ -1.13
SYNGAP1-207ENST00000628646 SEC61GP60059 68 aa7.98□□□□□ -1.13
SYNGAP1-207ENST00000628646 PRKDCP78527 4128 aaKnown RBP7.97□□□□□ -1.13
SYNGAP1-207ENST00000628646 KCNQ1DNQ9H478 68 aa7.97□□□□□ -1.13
SYNGAP1-207ENST00000628646 LOC110117498A0A087WWA1 95 aa7.97□□□□□ -1.13
SYNGAP1-207ENST00000628646 DNAH7Q8WXX0 4024 aa7.96□□□□□ -1.13
SYNGAP1-207ENST00000628646 SERTAD4-AS1Q5TG53 156 aa7.96□□□□□ -1.14
SYNGAP1-207ENST00000628646 CSMD3Q7Z407 3707 aa7.95□□□□□ -1.14
SYNGAP1-207ENST00000628646 UQCRQO14949 82 aa7.95□□□□□ -1.14
SYNGAP1-207ENST00000628646 BPY2O14599 106 aa7.95□□□□□ -1.14
SYNGAP1-207ENST00000628646 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.95□□□□□ -1.14
SYNGAP1-207ENST00000628646 LINC00528Q8N1L1 170 aa7.94□□□□□ -1.14
SYNGAP1-207ENST00000628646 A0A1W2PNN7 141 aa7.94□□□□□ -1.14
SYNGAP1-207ENST00000628646 A0A1B0GW54 56 aa7.93□□□□□ -1.14
SYNGAP1-207ENST00000628646 PRLHP81277 87 aa7.93□□□□□ -1.14
SYNGAP1-207ENST00000628646 SCXQ7RTU7 201 aa7.93□□□□□ -1.14
SYNGAP1-207ENST00000628646 FLG2Q5D862 2391 aaPredicted RBP7.93□□□□□ -1.14
SYNGAP1-207ENST00000628646 J3KT08 172 aa7.92□□□□□ -1.14
SYNGAP1-207ENST00000628646 Q6ZQT0 140 aa7.92□□□□□ -1.14
SYNGAP1-207ENST00000628646 Q6ZRX8 168 aa7.92□□□□□ -1.14
SYNGAP1-207ENST00000628646 KRTAP10-1P60331 282 aa7.92□□□□□ -1.14
SYNGAP1-207ENST00000628646 C4orf26Q17RF5 130 aa7.92□□□□□ -1.14
SYNGAP1-207ENST00000628646 V9GYY9 64 aa7.92□□□□□ -1.14
SYNGAP1-207ENST00000628646 IGLV5-37A0A075B6J1 123 aa7.91□□□□□ -1.14
SYNGAP1-207ENST00000628646 C3orf22Q8N5N4 141 aa7.91□□□□□ -1.14
SYNGAP1-207ENST00000628646 IGLV1-50A0A075B6I6 118 aa7.9□□□□□ -1.14
SYNGAP1-207ENST00000628646 CIRBP-AS1Q8TBR5 109 aa7.9□□□□□ -1.14
SYNGAP1-207ENST00000628646 RPL37AP61513 92 aaKnown RBP7.9□□□□□ -1.15
SYNGAP1-207ENST00000628646 SERP2Q8N6R1 65 aa7.9□□□□□ -1.15
SYNGAP1-207ENST00000628646 Q6ZVQ6 151 aa7.89□□□□□ -1.15
SYNGAP1-207ENST00000628646 COX7CP15954 63 aa7.89□□□□□ -1.15
SYNGAP1-207ENST00000628646 BRK1Q8WUW1 75 aa7.88□□□□□ -1.15
SYNGAP1-207ENST00000628646 CDK2AP2O75956 126 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms