RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 ERG28Q9UKR5 140 aa0.93□□□□□ -2.26
SCARNA4.1-201ENST00000628597 TRBV7-7A0A0K0K1E9 115 aa0.92□□□□□ -2.26
SCARNA4.1-201ENST00000628597 A0A1W2PRE2 83 aa0.92□□□□□ -2.26
SCARNA4.1-201ENST00000628597 COLCA2A8K830 154 aa0.92□□□□□ -2.26
SCARNA4.1-201ENST00000628597 INMT-MINDY4F8WBC2 141 aa0.92□□□□□ -2.26
SCARNA4.1-201ENST00000628597 TCAPO15273 167 aa0.92□□□□□ -2.26
SCARNA4.1-201ENST00000628597 GCHFRP30047 84 aa0.92□□□□□ -2.26
SCARNA4.1-201ENST00000628597 HERVK_113P63121 156 aa0.92□□□□□ -2.26
SCARNA4.1-201ENST00000628597 PDZD11Q5EBL8 140 aa0.92□□□□□ -2.26
SCARNA4.1-201ENST00000628597 LCE3AQ5TA76 89 aa0.92□□□□□ -2.26
SCARNA4.1-201ENST00000628597 BOD1L2Q8IYS8 172 aa0.92□□□□□ -2.26
SCARNA4.1-201ENST00000628597 SCGB1C1Q8TD33 95 aa0.92□□□□□ -2.26
SCARNA4.1-201ENST00000628597 MT1LQ93083 61 aa0.92□□□□□ -2.26
SCARNA4.1-201ENST00000628597 TMEM141Q96I45 108 aa0.92□□□□□ -2.26
SCARNA4.1-201ENST00000628597 SMIM2Q9BVW6 85 aa0.92□□□□□ -2.26
SCARNA4.1-201ENST00000628597 KRTAP4-4Q9BYR3 166 aa0.92□□□□□ -2.26
SCARNA4.1-201ENST00000628597 WDR61Q9GZS3 305 aaKnown RBP0.92□□□□□ -2.26
SCARNA4.1-201ENST00000628597 CDKN2A-AS1Q9UH64 79 aa0.92□□□□□ -2.26
SCARNA4.1-201ENST00000628597 TPRKBQ9Y3C4 175 aa0.92□□□□□ -2.26
SCARNA4.1-201ENST00000628597 ZNF815PA8K554 130 aa0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 FAM25AB3EWG3 89 aa0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 FAM25CB3EWG5 89 aa0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 FAM25GB3EWG6 89 aa0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 E9PLD3 99 aa0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 PPP1R17O96001 155 aa0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 APOA1P02647 267 aa0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 C3orf79P0CE67 100 aa0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 DDTP30046 118 aa0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 AKR1C3P42330 323 aa0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 CDC34P49427 236 aaPredicted RBP0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 LYRM7Q5U5X0 104 aa0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 C1orf146Q5VVC0 180 aa0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 BAGE2Q86Y30 109 aa0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 Q8N9L7 120 aa0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 FAM104AQ969W3 186 aa0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 VCXQ9H320 206 aa0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 VCX2Q9H322 139 aa0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 NXT2Q9NPJ8 142 aaKnown RBP0.91□□□□□ -2.26
SCARNA4.1-201ENST00000628597 A0A087WXM4 84 aa0.9□□□□□ -2.27
SCARNA4.1-201ENST00000628597 SIX6O95475 246 aa0.9□□□□□ -2.27
SCARNA4.1-201ENST00000628597 CXorf1O96002 111 aa0.9□□□□□ -2.27
SCARNA4.1-201ENST00000628597 PPBPP02775 128 aa0.9□□□□□ -2.27
SCARNA4.1-201ENST00000628597 S100A9P06702 114 aaKnown RBP0.9□□□□□ -2.27
SCARNA4.1-201ENST00000628597 STAG3L2P0CL84 134 aa0.9□□□□□ -2.27
SCARNA4.1-201ENST00000628597 STAG3L3P0CL85 134 aa0.9□□□□□ -2.27
SCARNA4.1-201ENST00000628597 LINC00158P58513 81 aa0.9□□□□□ -2.27
SCARNA4.1-201ENST00000628597 SSBP1Q04837 148 aaKnown RBP0.9□□□□□ -2.27
SCARNA4.1-201ENST00000628597 MCFD2Q8NI22 146 aa0.9□□□□□ -2.27
SCARNA4.1-201ENST00000628597 STOML3Q8TAV4 291 aa0.9□□□□□ -2.27
SCARNA4.1-201ENST00000628597 PSMG3Q9BT73 122 aaPredicted RBP0.9□□□□□ -2.27
SCARNA4.1-201ENST00000628597 NHP2Q9NX24 153 aaKnown RBP0.9□□□□□ -2.27
SCARNA4.1-201ENST00000628597 TRBV20OR9-2A0A075B6H5 130 aa0.89□□□□□ -2.27
SCARNA4.1-201ENST00000628597 HERVK_113P61574 105 aa0.89□□□□□ -2.27
SCARNA4.1-201ENST00000628597 PMVKQ15126 192 aa0.89□□□□□ -2.27
SCARNA4.1-201ENST00000628597 KRTAP6-2Q3LI66 62 aa0.89□□□□□ -2.27
SCARNA4.1-201ENST00000628597 KRTAP19-5Q3LI72 72 aa0.89□□□□□ -2.27
SCARNA4.1-201ENST00000628597 Q5BKY6 102 aa0.89□□□□□ -2.27
SCARNA4.1-201ENST00000628597 S100A7L2Q5SY68 101 aa0.89□□□□□ -2.27
SCARNA4.1-201ENST00000628597 C9orf62Q8N4C0 152 aa0.89□□□□□ -2.27
SCARNA4.1-201ENST00000628597 SS18L2Q9UHA2 77 aa0.89□□□□□ -2.27
SCARNA4.1-201ENST00000628597 S4R3F8 94 aa0.89□□□□□ -2.27
SCARNA4.1-201ENST00000628597 A0A0J9YXY3 114 aa0.88□□□□□ -2.27
SCARNA4.1-201ENST00000628597 A0A0U1RRA0 63 aa0.88□□□□□ -2.27
SCARNA4.1-201ENST00000628597 LOC389332A0A1B0GUA5 103 aa0.88□□□□□ -2.27
SCARNA4.1-201ENST00000628597 SNAPINO95295 136 aa0.88□□□□□ -2.27
SCARNA4.1-201ENST00000628597 GIPP09681 153 aaPredicted RBP0.88□□□□□ -2.27
SCARNA4.1-201ENST00000628597 P0C880 135 aa0.88□□□□□ -2.27
SCARNA4.1-201ENST00000628597 SIGMAR1Q99720 223 aa0.88□□□□□ -2.27
SCARNA4.1-201ENST00000628597 CST9LQ9H4G1 147 aa0.88□□□□□ -2.27
SCARNA4.1-201ENST00000628597 TRAV23DV6A0A075B6W5 121 aa0.87□□□□□ -2.27
SCARNA4.1-201ENST00000628597 ATP6V1G2O95670 118 aa0.87□□□□□ -2.27
SCARNA4.1-201ENST00000628597 LCE1BQ5T7P3 118 aa0.87□□□□□ -2.27
SCARNA4.1-201ENST00000628597 CEND1Q8N111 149 aa0.87□□□□□ -2.27
SCARNA4.1-201ENST00000628597 TCEAL7Q9BRU2 100 aa0.87□□□□□ -2.27
SCARNA4.1-201ENST00000628597 SPINK8P0C7L1 97 aa0.86□□□□□ -2.27
SCARNA4.1-201ENST00000628597 MRPS10P82664 201 aaKnown RBP0.86□□□□□ -2.27
SCARNA4.1-201ENST00000628597 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
SCARNA4.1-201ENST00000628597 Q6JHZ5 121 aa0.86□□□□□ -2.27
SCARNA4.1-201ENST00000628597 CAMK2N1Q7Z7J9 78 aa0.86□□□□□ -2.27
SCARNA4.1-201ENST00000628597 ENKURQ8TC29 256 aa0.86□□□□□ -2.27
SCARNA4.1-201ENST00000628597 HIST1H4GQ99525 98 aa0.86□□□□□ -2.27
SCARNA4.1-201ENST00000628597 CNFNQ9BYD5 112 aa0.86□□□□□ -2.27
SCARNA4.1-201ENST00000628597 CBY1Q9Y3M2 126 aa0.86□□□□□ -2.27
SCARNA4.1-201ENST00000628597 BORCS7-ASMTA0A0B4J1R7 106 aa0.85□□□□□ -2.27
SCARNA4.1-201ENST00000628597 IGKV3D-7A0A0C4DH55 119 aa0.85□□□□□ -2.27
SCARNA4.1-201ENST00000628597 FAM74A7A6NL05 159 aa0.85□□□□□ -2.27
SCARNA4.1-201ENST00000628597 H3BRM9 83 aa0.85□□□□□ -2.27
SCARNA4.1-201ENST00000628597 FAUP35544 74 aaKnown RBP0.85□□□□□ -2.27
SCARNA4.1-201ENST00000628597 LCE1CQ5T751 118 aa0.85□□□□□ -2.27
SCARNA4.1-201ENST00000628597 AMN1Q8IY45 258 aa0.85□□□□□ -2.27
SCARNA4.1-201ENST00000628597 CLEC2BQ92478 149 aa0.85□□□□□ -2.27
SCARNA4.1-201ENST00000628597 BORCS7Q96B45 105 aa0.85□□□□□ -2.27
SCARNA4.1-201ENST00000628597 ACTR3CQ9C0K3 210 aaPredicted RBP0.85□□□□□ -2.27
SCARNA4.1-201ENST00000628597 TRBV10-2A0A0K0K1G8 114 aa0.84□□□□□ -2.27
SCARNA4.1-201ENST00000628597 SMKR1H3BMG3 65 aa0.84□□□□□ -2.27
SCARNA4.1-201ENST00000628597 TEX46H3BTG2 121 aa0.84□□□□□ -2.27
SCARNA4.1-201ENST00000628597 K7EQZ3 153 aa0.84□□□□□ -2.27
SCARNA4.1-201ENST00000628597 MBP02144 154 aa0.84□□□□□ -2.27
SCARNA4.1-201ENST00000628597 RAB4AP20338 218 aa0.84□□□□□ -2.27
SCARNA4.1-201ENST00000628597 ZNF726P1Q15940 193 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms