RNA–Protein interactions for RNA: ENST00000627490.2

PBX1-222, Transcript of PBX homeobox 1, humanhuman

TSL 2 BASIC

Gene PBX1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-222ENST00000627490 Q6ZVQ6 151 aa13.31□□□□□ -0.28
PBX1-222ENST00000627490 TENM3Q9P273 2699 aa13.3□□□□□ -0.28
PBX1-222ENST00000627490 LINC01547P58512 204 aaPredicted RBP13.3□□□□□ -0.28
PBX1-222ENST00000627490 ESRGQ1W209 222 aa13.29□□□□□ -0.28
PBX1-222ENST00000627490 LINC00528Q8N1L1 170 aa13.29□□□□□ -0.28
PBX1-222ENST00000627490 TRAV10A0A0B4J240 114 aa13.26□□□□□ -0.29
PBX1-222ENST00000627490 DEFB131BA0A096LNP1 70 aa13.25□□□□□ -0.29
PBX1-222ENST00000627490 TRAV7A0A075B6U4 112 aa13.25□□□□□ -0.29
PBX1-222ENST00000627490 HAMPP81172 84 aa13.25□□□□□ -0.29
PBX1-222ENST00000627490 SYCNQ0VAF6 134 aa13.25□□□□□ -0.29
PBX1-222ENST00000627490 M0R2N4 97 aa13.24□□□□□ -0.29
PBX1-222ENST00000627490 LOC107984640A0A0U1RRK4 108 aa13.22□□□□□ -0.29
PBX1-222ENST00000627490 CYSTM1Q9H1C7 97 aa13.22□□□□□ -0.29
PBX1-222ENST00000627490 IGKV2D-24A0A075B6R9 120 aa13.21□□□□□ -0.29
PBX1-222ENST00000627490 TLX1NBP0CAT3 122 aa13.21□□□□□ -0.29
PBX1-222ENST00000627490 KCNQ1DNQ9H478 68 aa13.21□□□□□ -0.29
PBX1-222ENST00000627490 PLA2G2DQ9UNK4 145 aa13.21□□□□□ -0.29
PBX1-222ENST00000627490 DNAH10OSP0CZ25 163 aa13.2□□□□□ -0.3
PBX1-222ENST00000627490 Q6ZRP5 223 aa13.2□□□□□ -0.3
PBX1-222ENST00000627490 PRKDCP78527 4128 aaKnown RBP13.19□□□□□ -0.3
PBX1-222ENST00000627490 MEGF8Q7Z7M0 2845 aa13.18□□□□□ -0.3
PBX1-222ENST00000627490 NKAPP1Q8N9T2 125 aa13.18□□□□□ -0.3
PBX1-222ENST00000627490 DPH3Q96FX2 82 aa13.17□□□□□ -0.3
PBX1-222ENST00000627490 COL7A1Q02388 2944 aa13.16□□□□□ -0.3
PBX1-222ENST00000627490 IGLV5-37A0A075B6J1 123 aa13.15□□□□□ -0.31
PBX1-222ENST00000627490 A0A1B0GW54 56 aa13.14□□□□□ -0.31
PBX1-222ENST00000627490 DHRS4-AS1Q9P1J3 65 aa13.13□□□□□ -0.31
PBX1-222ENST00000627490 C7orf33Q8WU49 177 aa13.12□□□□□ -0.31
PBX1-222ENST00000627490 PRYO14603 147 aa13.11□□□□□ -0.31
PBX1-222ENST00000627490 C20orf197Q8N268 126 aa13.11□□□□□ -0.31
PBX1-222ENST00000627490 RMI2Q96E14 147 aa13.1□□□□□ -0.31
PBX1-222ENST00000627490 KLKP1Q107X0 134 aa13.09□□□□□ -0.31
PBX1-222ENST00000627490 IGLV5-48A0A075B6I7 105 aa13.07□□□□□ -0.32
PBX1-222ENST00000627490 SERTAD4-AS1Q5TG53 156 aa13.07□□□□□ -0.32
PBX1-222ENST00000627490 NUPR2A6NF83 97 aa13.07□□□□□ -0.32
PBX1-222ENST00000627490 STAB2Q8WWQ8 2551 aa13.06□□□□□ -0.32
PBX1-222ENST00000627490 FAM19A5Q7Z5A7 132 aaPredicted RBP13.06□□□□□ -0.32
PBX1-222ENST00000627490 NREPQ16612 68 aa13.05□□□□□ -0.32
PBX1-222ENST00000627490 SPRR1AP35321 89 aa13.04□□□□□ -0.32
PBX1-222ENST00000627490 Q8N377 158 aa13.04□□□□□ -0.32
PBX1-222ENST00000627490 Q6ZRX8 168 aa13.04□□□□□ -0.32
PBX1-222ENST00000627490 IGLV1-50A0A075B6I6 118 aa13.03□□□□□ -0.32
PBX1-222ENST00000627490 NDUFC1O43677 76 aa13.03□□□□□ -0.32
PBX1-222ENST00000627490 ERC2-IT1O76042 136 aa13.03□□□□□ -0.32
PBX1-222ENST00000627490 KRTAP4-16G5E9R7 235 aaPredicted RBP13.02□□□□□ -0.32
PBX1-222ENST00000627490 FAM236DA0A1B0GTK5 79 aa13.02□□□□□ -0.33
PBX1-222ENST00000627490 FAM236CP0DP71 79 aa13.02□□□□□ -0.33
PBX1-222ENST00000627490 H7BZZ5 65 aa13.01□□□□□ -0.33
PBX1-222ENST00000627490 APLNQ9ULZ1 77 aa13.01□□□□□ -0.33
PBX1-222ENST00000627490 LINC00588Q9Y4M8 146 aa13.01□□□□□ -0.33
PBX1-222ENST00000627490 FBN3Q75N90 2809 aa13.01□□□□□ -0.33
PBX1-222ENST00000627490 DYNC2H1Q8NCM8 4307 aaKnown RBP13.01□□□□□ -0.33
PBX1-222ENST00000627490 ETDCA0A1B0GVM5 59 aa13□□□□□ -0.33
PBX1-222ENST00000627490 SCXQ7RTU7 201 aa13□□□□□ -0.33
PBX1-222ENST00000627490 FUSP35637 526 aaKnown RBP eCLIP12.99□□□□□ -0.33
PBX1-222ENST00000627490 IGKV4-1P06312 121 aa12.98□□□□□ -0.33
PBX1-222ENST00000627490 BPY2O14599 106 aa12.97□□□□□ -0.33
PBX1-222ENST00000627490 DEFB105AQ8NG35 78 aa12.97□□□□□ -0.33
PBX1-222ENST00000627490 DNAH7Q8WXX0 4024 aa12.96□□□□□ -0.33
PBX1-222ENST00000627490 SERP1Q9Y6X1 66 aa12.96□□□□□ -0.34
PBX1-222ENST00000627490 TNP2Q05952 138 aa12.95□□□□□ -0.34
PBX1-222ENST00000627490 Q9BRP9 147 aa12.94□□□□□ -0.34
PBX1-222ENST00000627490 ATP5EP56381 51 aaPredicted RBP12.94□□□□□ -0.34
PBX1-222ENST00000627490 WWC2-AS2Q96NR7 200 aa12.94□□□□□ -0.34
PBX1-222ENST00000627490 EPM2AB3EWF7 344 aa12.93□□□□□ -0.34
PBX1-222ENST00000627490 MRPL55Q7Z7F7 128 aaKnown RBP12.93□□□□□ -0.34
PBX1-222ENST00000627490 OXTP01178 125 aa12.92□□□□□ -0.34
PBX1-222ENST00000627490 RPL37AP8A6NKH3 93 aa12.92□□□□□ -0.34
PBX1-222ENST00000627490 C1orf137Q5JT78 98 aa12.9□□□□□ -0.34
PBX1-222ENST00000627490 Q8NBF4 154 aa12.9□□□□□ -0.34
PBX1-222ENST00000627490 FAM168BA1KXE4 195 aa12.89□□□□□ -0.35
PBX1-222ENST00000627490 CASC10Q5T4H9 136 aa12.89□□□□□ -0.35
PBX1-222ENST00000627490 SPRR4Q96PI1 79 aa12.89□□□□□ -0.35
PBX1-222ENST00000627490 C3orf84H3BNL1 204 aa12.89□□□□□ -0.35
PBX1-222ENST00000627490 KRTAP7-1Q8IUC3 87 aa12.89□□□□□ -0.35
PBX1-222ENST00000627490 A0A1W2PNM2 257 aa12.88□□□□□ -0.35
PBX1-222ENST00000627490 C5orf47Q569G3 176 aa12.88□□□□□ -0.35
PBX1-222ENST00000627490 SNURFQ9Y675 71 aa12.88□□□□□ -0.35
PBX1-222ENST00000627490 OCR1Q9BZK8 76 aa12.87□□□□□ -0.35
PBX1-222ENST00000627490 F8WEM9 126 aa12.86□□□□□ -0.35
PBX1-222ENST00000627490 TMEM254Q8TBM7 123 aa12.86□□□□□ -0.35
PBX1-222ENST00000627490 REG3GQ6UW15 175 aa12.86□□□□□ -0.35
PBX1-222ENST00000627490 CSMD3Q7Z407 3707 aa12.86□□□□□ -0.35
PBX1-222ENST00000627490 UBE2DNLQ8IWF7 75 aa12.84□□□□□ -0.35
PBX1-222ENST00000627490 Q8N9L7 120 aa12.84□□□□□ -0.35
PBX1-222ENST00000627490 UBE2BP63146 152 aa12.83□□□□□ -0.36
PBX1-222ENST00000627490 ST20-AS1Q8NBB2 130 aa12.83□□□□□ -0.36
PBX1-222ENST00000627490 STARD9Q9P2P6 4700 aa12.82□□□□□ -0.36
PBX1-222ENST00000627490 PLECQ15149 4684 aaKnown RBP12.81□□□□□ -0.36
PBX1-222ENST00000627490 A0A0U1RQV1 116 aa12.8□□□□□ -0.36
PBX1-222ENST00000627490 Q5XG85 94 aa12.8□□□□□ -0.36
PBX1-222ENST00000627490 CNBPP62633 177 aaKnown RBP12.79□□□□□ -0.36
PBX1-222ENST00000627490 C16orf90A8MZG2 172 aa12.78□□□□□ -0.36
PBX1-222ENST00000627490 SMIM29Q86T20 159 aa12.76□□□□□ -0.37
PBX1-222ENST00000627490 IGLV8-61A0A075B6I0 122 aa12.75□□□□□ -0.37
PBX1-222ENST00000627490 SMIM26A0A096LP01 95 aa12.74□□□□□ -0.37
PBX1-222ENST00000627490 C14orf177Q52M58 125 aa12.74□□□□□ -0.37
PBX1-222ENST00000627490 LCE6AA0A183 80 aa12.74□□□□□ -0.37
PBX1-222ENST00000627490 LINC00476Q8WZB0 136 aa12.72□□□□□ -0.37
PBX1-222ENST00000627490 DSCR10P59022 87 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms