RNA–Protein interactions for RNA: ENST00000623478.1

PCDHB4-202, Transcript of protocadherin beta 4, humanhuman

TSL 1 (best)

Gene PCDHB4, Length 1,206 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4-202ENST00000623478 PPDPFQ9H3Y8 114 aa12.1□□□□□ -0.47
PCDHB4-202ENST00000623478 IGLV6-57P01721 117 aa12.09□□□□□ -0.47
PCDHB4-202ENST00000623478 S100A7L2Q5SY68 101 aa12.09□□□□□ -0.47
PCDHB4-202ENST00000623478 ERC2-IT1O76042 136 aa12.08□□□□□ -0.48
PCDHB4-202ENST00000623478 LITAFQ99732 161 aa12.08□□□□□ -0.48
PCDHB4-202ENST00000623478 KRTDAPP60985 99 aa12.07□□□□□ -0.48
PCDHB4-202ENST00000623478 Q9BRP9 147 aa12.07□□□□□ -0.48
PCDHB4-202ENST00000623478 TTTY13Q9BZ97 58 aa12.07□□□□□ -0.48
PCDHB4-202ENST00000623478 Q6ZRX8 168 aa12.06□□□□□ -0.48
PCDHB4-202ENST00000623478 TMA7Q9Y2S6 64 aaKnown RBP12.06□□□□□ -0.48
PCDHB4-202ENST00000623478 MUC2Q02817 5179 aa12.06□□□□□ -0.48
PCDHB4-202ENST00000623478 TRAV23DV6A0A075B6W5 121 aa12.05□□□□□ -0.48
PCDHB4-202ENST00000623478 ZNF815PA8K554 130 aa12.05□□□□□ -0.48
PCDHB4-202ENST00000623478 LINC00483Q53H64 154 aa12.04□□□□□ -0.48
PCDHB4-202ENST00000623478 GAGE2AQ6NT46 116 aa12.04□□□□□ -0.48
PCDHB4-202ENST00000623478 LINC00308Q8TCZ7 52 aa12.04□□□□□ -0.48
PCDHB4-202ENST00000623478 TIMM17BO60830 172 aa12.02□□□□□ -0.49
PCDHB4-202ENST00000623478 S100A2P29034 98 aa12.02□□□□□ -0.49
PCDHB4-202ENST00000623478 Q8NBF4 154 aa12.02□□□□□ -0.49
PCDHB4-202ENST00000623478 ZNF73O43830 326 aaPredicted RBP12.01□□□□□ -0.49
PCDHB4-202ENST00000623478 SPANXCQ9NY87 97 aa12□□□□□ -0.49
PCDHB4-202ENST00000623478 CTAG1AP78358 180 aa11.99□□□□□ -0.49
PCDHB4-202ENST00000623478 SPAG11AQ6PDA7 123 aa11.99□□□□□ -0.49
PCDHB4-202ENST00000623478 C20orf202A1L168 122 aa11.97□□□□□ -0.49
PCDHB4-202ENST00000623478 ANKRD39Q53RE8 183 aa11.97□□□□□ -0.49
PCDHB4-202ENST00000623478 ATOH7Q8N100 152 aa11.97□□□□□ -0.49
PCDHB4-202ENST00000623478 IGLV9-49A0A0B4J1Y8 123 aa11.96□□□□□ -0.49
PCDHB4-202ENST00000623478 MOBPQ13875 183 aa11.96□□□□□ -0.49
PCDHB4-202ENST00000623478 JOSD1Q15040 202 aaPredicted RBP11.96□□□□□ -0.49
PCDHB4-202ENST00000623478 C4orf48Q5BLP8 95 aa11.96□□□□□ -0.49
PCDHB4-202ENST00000623478 OR13C6PQ8NH95 151 aa11.96□□□□□ -0.49
PCDHB4-202ENST00000623478 IGLV7-46A0A075B6I9 117 aa11.95□□□□□ -0.5
PCDHB4-202ENST00000623478 ST20-AS1Q8NBB2 130 aa11.93□□□□□ -0.5
PCDHB4-202ENST00000623478 TPRXLQ17RH7 258 aa11.92□□□□□ -0.5
PCDHB4-202ENST00000623478 SCGB1D4Q6XE38 83 aa11.92□□□□□ -0.5
PCDHB4-202ENST00000623478 SPANXDQ9BXN6 97 aa11.92□□□□□ -0.5
PCDHB4-202ENST00000623478 CBY1Q9Y3M2 126 aa11.91□□□□□ -0.5
PCDHB4-202ENST00000623478 MUC17Q685J3 4493 aa11.9□□□□□ -0.5
PCDHB4-202ENST00000623478 HINT1P49773 126 aaPredicted RBP11.89□□□□□ -0.51
PCDHB4-202ENST00000623478 PCP2Q8IVA1 136 aa11.89□□□□□ -0.51
PCDHB4-202ENST00000623478 SPINK1P00995 79 aa11.88□□□□□ -0.51
PCDHB4-202ENST00000623478 CDIP1Q9H305 208 aa11.88□□□□□ -0.51
PCDHB4-202ENST00000623478 SSBP3-AS1Q7Z2R9 100 aa11.86□□□□□ -0.51
PCDHB4-202ENST00000623478 LINC00518Q8N0U6 118 aa11.86□□□□□ -0.51
PCDHB4-202ENST00000623478 C6orf99Q4VX62 202 aa11.85□□□□□ -0.51
PCDHB4-202ENST00000623478 C9orf153Q5TBE3 101 aa11.85□□□□□ -0.51
PCDHB4-202ENST00000623478 FP248Q71RG6 208 aaPredicted RBP11.84□□□□□ -0.51
PCDHB4-202ENST00000623478 AKR1D1P51857 326 aa11.83□□□□□ -0.52
PCDHB4-202ENST00000623478 DHRS4-AS1Q9P1J3 65 aa11.83□□□□□ -0.52
PCDHB4-202ENST00000623478 IFITM1P13164 125 aa11.82□□□□□ -0.52
PCDHB4-202ENST00000623478 COX7BP24311 80 aa11.82□□□□□ -0.52
PCDHB4-202ENST00000623478 ELOF1P60002 83 aaKnown RBP11.82□□□□□ -0.52
PCDHB4-202ENST00000623478 LOC105371267A0A1B0GV96 52 aa11.81□□□□□ -0.52
PCDHB4-202ENST00000623478 PYY3Q5JQD4 70 aa11.81□□□□□ -0.52
PCDHB4-202ENST00000623478 MUSTN1Q8IVN3 82 aa11.81□□□□□ -0.52
PCDHB4-202ENST00000623478 COPS9Q8WXC6 57 aa11.81□□□□□ -0.52
PCDHB4-202ENST00000623478 SCGB1D1O95968 90 aa11.8□□□□□ -0.52
PCDHB4-202ENST00000623478 Q8N377 158 aa11.8□□□□□ -0.52
PCDHB4-202ENST00000623478 SPRR1BP22528 89 aa11.79□□□□□ -0.52
PCDHB4-202ENST00000623478 RPS29P62273 56 aaKnown RBP11.79□□□□□ -0.52
PCDHB4-202ENST00000623478 Q6ZVH6 145 aa11.79□□□□□ -0.52
PCDHB4-202ENST00000623478 A6NDN8 102 aa11.78□□□□□ -0.52
PCDHB4-202ENST00000623478 KRTAP13-3Q3SY46 172 aa11.77□□□□□ -0.53
PCDHB4-202ENST00000623478 FAT4Q6V0I7 4981 aa11.76□□□□□ -0.53
PCDHB4-202ENST00000623478 TRBV7-6A0A0J9YX20 115 aa11.74□□□□□ -0.53
PCDHB4-202ENST00000623478 SLC25A20O43772 301 aa11.73□□□□□ -0.53
PCDHB4-202ENST00000623478 SLC25A34Q6PIV7 304 aa11.73□□□□□ -0.53
PCDHB4-202ENST00000623478 DEFB105AQ8NG35 78 aa11.73□□□□□ -0.53
PCDHB4-202ENST00000623478 A0A1B0GWB2 263 aa11.72□□□□□ -0.53
PCDHB4-202ENST00000623478 HSBP1L1C9JCN9 74 aa11.72□□□□□ -0.53
PCDHB4-202ENST00000623478 TAL2Q16559 108 aa11.71□□□□□ -0.53
PCDHB4-202ENST00000623478 LAMTOR3Q9UHA4 124 aa11.71□□□□□ -0.53
PCDHB4-202ENST00000623478 Q1RN00 199 aa11.7□□□□□ -0.54
PCDHB4-202ENST00000623478 TRAV13-2A0A0B4J235 113 aa11.69□□□□□ -0.54
PCDHB4-202ENST00000623478 A0A0U1RQV1 116 aa11.69□□□□□ -0.54
PCDHB4-202ENST00000623478 HRCT1Q6UXD1 115 aa11.69□□□□□ -0.54
PCDHB4-202ENST00000623478 SMIM11BQ8TCY0 68 aa11.69□□□□□ -0.54
PCDHB4-202ENST00000623478 TEX49A0A1B0GTD5 131 aa11.67□□□□□ -0.54
PCDHB4-202ENST00000623478 LINC01547P58512 204 aaPredicted RBP11.66□□□□□ -0.54
PCDHB4-202ENST00000623478 SMIM29Q86T20 159 aa11.64□□□□□ -0.55
PCDHB4-202ENST00000623478 VAMP8Q9BV40 100 aa11.64□□□□□ -0.55
PCDHB4-202ENST00000623478 PAM16Q9Y3D7 125 aa11.64□□□□□ -0.55
PCDHB4-202ENST00000623478 IGLV5-48A0A075B6I7 105 aa11.63□□□□□ -0.55
PCDHB4-202ENST00000623478 A4D1N5 150 aa11.63□□□□□ -0.55
PCDHB4-202ENST00000623478 SPATA45Q537H7 98 aa11.63□□□□□ -0.55
PCDHB4-202ENST00000623478 SMIM6P0DI80 62 aa11.62□□□□□ -0.55
PCDHB4-202ENST00000623478 COX8AP10176 69 aa11.61□□□□□ -0.55
PCDHB4-202ENST00000623478 LIMD2Q9BT23 127 aa11.61□□□□□ -0.55
PCDHB4-202ENST00000623478 PRO1933Q9H354 126 aa11.6□□□□□ -0.55
PCDHB4-202ENST00000623478 DLEU1O43261 78 aa11.59□□□□□ -0.55
PCDHB4-202ENST00000623478 ASB16-AS1Q495Z4 193 aa11.59□□□□□ -0.55
PCDHB4-202ENST00000623478 NHP2Q9NX24 153 aaKnown RBP11.59□□□□□ -0.55
PCDHB4-202ENST00000623478 A0A0G2JQZ4 141 aa11.58□□□□□ -0.56
PCDHB4-202ENST00000623478 C12orf57Q99622 126 aa11.58□□□□□ -0.56
PCDHB4-202ENST00000623478 C14orf144Q96I85 54 aa11.57□□□□□ -0.56
PCDHB4-202ENST00000623478 H7C2G1 150 aa11.56□□□□□ -0.56
PCDHB4-202ENST00000623478 CD164Q04900 197 aa11.56□□□□□ -0.56
PCDHB4-202ENST00000623478 HIST1H4GQ99525 98 aa11.55□□□□□ -0.56
PCDHB4-202ENST00000623478 VAMP3Q15836 100 aa11.54□□□□□ -0.56
PCDHB4-202ENST00000623478 XP32Q5T750 250 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms