RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 SERP2Q8N6R1 65 aa7.78□□□□□ -1.16
TP53-227ENST00000622645 SVIPQ8NHG7 77 aa7.77□□□□□ -1.16
TP53-227ENST00000622645 ATP5EP2Q5VTU8 51 aa7.77□□□□□ -1.17
TP53-227ENST00000622645 KCNQ1DNQ9H478 68 aa7.77□□□□□ -1.17
TP53-227ENST00000622645 TRBV7-4A0A0J9YYF1 115 aa7.76□□□□□ -1.17
TP53-227ENST00000622645 RPL37AP8A6NKH3 93 aa7.76□□□□□ -1.17
TP53-227ENST00000622645 GHRHP01286 108 aa7.75□□□□□ -1.17
TP53-227ENST00000622645 TLX1NBP0CAT3 122 aa7.75□□□□□ -1.17
TP53-227ENST00000622645 PDE6GP18545 87 aa7.75□□□□□ -1.17
TP53-227ENST00000622645 Q6ZVQ6 151 aa7.75□□□□□ -1.17
TP53-227ENST00000622645 HAMPP81172 84 aa7.75□□□□□ -1.17
TP53-227ENST00000622645 UPK3BQ9BT76 320 aa7.75□□□□□ -1.17
TP53-227ENST00000622645 LINC01547P58512 204 aaPredicted RBP7.74□□□□□ -1.17
TP53-227ENST00000622645 KRTAP7-1Q8IUC3 87 aa7.74□□□□□ -1.17
TP53-227ENST00000622645 DEFB105AQ8NG35 78 aa7.74□□□□□ -1.17
TP53-227ENST00000622645 STAB2Q8WWQ8 2551 aa7.73□□□□□ -1.17
TP53-227ENST00000622645 DNAH1Q9P2D7 4330 aa7.73□□□□□ -1.17
TP53-227ENST00000622645 RMI2Q96E14 147 aa7.73□□□□□ -1.17
TP53-227ENST00000622645 LOC107984640A0A0U1RRK4 108 aa7.72□□□□□ -1.17
TP53-227ENST00000622645 PLA2G2DQ9UNK4 145 aa7.72□□□□□ -1.17
TP53-227ENST00000622645 IGLV1-50A0A075B6I6 118 aa7.71□□□□□ -1.18
TP53-227ENST00000622645 FAM19A5Q7Z5A7 132 aaPredicted RBP7.71□□□□□ -1.18
TP53-227ENST00000622645 LYSTQ99698 3801 aa7.71□□□□□ -1.18
TP53-227ENST00000622645 KRTAP1-5Q9BYS1 174 aa7.71□□□□□ -1.18
TP53-227ENST00000622645 COL7A1Q02388 2944 aa7.7□□□□□ -1.18
TP53-227ENST00000622645 Q8N377 158 aa7.7□□□□□ -1.18
TP53-227ENST00000622645 KRTAP4-16G5E9R7 235 aaPredicted RBP7.69□□□□□ -1.18
TP53-227ENST00000622645 Q6ZRX8 168 aa7.69□□□□□ -1.18
TP53-227ENST00000622645 Q9BRP9 147 aa7.69□□□□□ -1.18
TP53-227ENST00000622645 SCXQ7RTU7 201 aa7.69□□□□□ -1.18
TP53-227ENST00000622645 IGLV5-37A0A075B6J1 123 aa7.68□□□□□ -1.18
TP53-227ENST00000622645 ETDCA0A1B0GVM5 59 aa7.67□□□□□ -1.18
TP53-227ENST00000622645 MRPL55Q7Z7F7 128 aaKnown RBP7.67□□□□□ -1.18
TP53-227ENST00000622645 SPRR1AP35321 89 aa7.67□□□□□ -1.18
TP53-227ENST00000622645 J3KT08 172 aa7.66□□□□□ -1.18
TP53-227ENST00000622645 PRYO14603 147 aa7.66□□□□□ -1.18
TP53-227ENST00000622645 ST20-AS1Q8NBB2 130 aa7.66□□□□□ -1.18
TP53-227ENST00000622645 DNAH10Q8IVF4 4471 aa7.66□□□□□ -1.18
TP53-227ENST00000622645 TMEM258P61165 79 aa7.66□□□□□ -1.18
TP53-227ENST00000622645 CXCL6P80162 114 aa7.66□□□□□ -1.18
TP53-227ENST00000622645 DHRS4-AS1Q9P1J3 65 aa7.66□□□□□ -1.18
TP53-227ENST00000622645 ERC2-IT1O76042 136 aa7.65□□□□□ -1.19
TP53-227ENST00000622645 C3orf84H3BNL1 204 aa7.64□□□□□ -1.19
TP53-227ENST00000622645 C20orf197Q8N268 126 aa7.64□□□□□ -1.19
TP53-227ENST00000622645 IGKV2-24A0A0C4DH68 120 aa7.64□□□□□ -1.19
TP53-227ENST00000622645 IGLV5-48A0A075B6I7 105 aa7.63□□□□□ -1.19
TP53-227ENST00000622645 PSCAO43653 123 aa7.63□□□□□ -1.19
TP53-227ENST00000622645 UBE2DNLQ8IWF7 75 aa7.63□□□□□ -1.19
TP53-227ENST00000622645 DPH3Q96FX2 82 aa7.63□□□□□ -1.19
TP53-227ENST00000622645 DNAH9Q9NYC9 4486 aa7.63□□□□□ -1.19
TP53-227ENST00000622645 A0A096LNI7 61 aa7.63□□□□□ -1.19
TP53-227ENST00000622645 MDFIQ99750 246 aa7.63□□□□□ -1.19
TP53-227ENST00000622645 TENM2Q9NT68 2774 aa7.62□□□□□ -1.19
TP53-227ENST00000622645 UBE2BP63146 152 aa7.62□□□□□ -1.19
TP53-227ENST00000622645 APLNQ9ULZ1 77 aa7.62□□□□□ -1.19
TP53-227ENST00000622645 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.62□□□□□ -1.19
TP53-227ENST00000622645 Q8N9L7 120 aa7.61□□□□□ -1.19
TP53-227ENST00000622645 RPS28P62857 69 aaKnown RBP7.61□□□□□ -1.19
TP53-227ENST00000622645 NREPQ16612 68 aa7.61□□□□□ -1.19
TP53-227ENST00000622645 REG3GQ6UW15 175 aa7.61□□□□□ -1.19
TP53-227ENST00000622645 A0A1W2PNN7 141 aa7.6□□□□□ -1.19
TP53-227ENST00000622645 TRAV7A0A075B6U4 112 aa7.6□□□□□ -1.19
TP53-227ENST00000622645 C16orf90A8MZG2 172 aa7.59□□□□□ -1.19
TP53-227ENST00000622645 OXTP01178 125 aa7.59□□□□□ -1.19
TP53-227ENST00000622645 A0A1W2PNM2 257 aa7.59□□□□□ -1.19
TP53-227ENST00000622645 CNBPP62633 177 aaKnown RBP7.59□□□□□ -1.19
TP53-227ENST00000622645 TNP2Q05952 138 aa7.59□□□□□ -1.19
TP53-227ENST00000622645 CSMD3Q7Z407 3707 aa7.59□□□□□ -1.19
TP53-227ENST00000622645 C1orf137Q5JT78 98 aa7.58□□□□□ -1.2
TP53-227ENST00000622645 BCE1O60756 84 aa7.58□□□□□ -1.2
TP53-227ENST00000622645 PRLHP81277 87 aa7.57□□□□□ -1.2
TP53-227ENST00000622645 DNAH7Q8WXX0 4024 aa7.56□□□□□ -1.2
TP53-227ENST00000622645 CHTF8P0CG12 524 aa7.56□□□□□ -1.2
TP53-227ENST00000622645 FUSP35637 526 aaKnown RBP eCLIP7.56□□□□□ -1.2
TP53-227ENST00000622645 B9D2Q9BPU9 175 aa7.56□□□□□ -1.2
TP53-227ENST00000622645 BPY2O14599 106 aa7.55□□□□□ -1.2
TP53-227ENST00000622645 SNURFQ9Y675 71 aa7.55□□□□□ -1.2
TP53-227ENST00000622645 IGKV4-1P06312 121 aa7.55□□□□□ -1.2
TP53-227ENST00000622645 SMIM29Q86T20 159 aa7.55□□□□□ -1.2
TP53-227ENST00000622645 A0A0G2JQZ4 141 aa7.54□□□□□ -1.2
TP53-227ENST00000622645 H7BZZ5 65 aa7.54□□□□□ -1.2
TP53-227ENST00000622645 KRTAP11-1Q8IUC1 163 aa7.54□□□□□ -1.2
TP53-227ENST00000622645 Q8NBF4 154 aa7.54□□□□□ -1.2
TP53-227ENST00000622645 HIGD2AQ9BW72 106 aa7.53□□□□□ -1.2
TP53-227ENST00000622645 FAM236DA0A1B0GTK5 79 aa7.53□□□□□ -1.2
TP53-227ENST00000622645 FAM236CP0DP71 79 aa7.53□□□□□ -1.2
TP53-227ENST00000622645 PHF5AQ7RTV0 110 aaKnown RBP7.53□□□□□ -1.2
TP53-227ENST00000622645 PLECQ15149 4684 aaKnown RBP7.52□□□□□ -1.21
TP53-227ENST00000622645 KLKP1Q107X0 134 aa7.52□□□□□ -1.21
TP53-227ENST00000622645 C14orf177Q52M58 125 aa7.51□□□□□ -1.21
TP53-227ENST00000622645 LRCOL1A6NCL2 159 aa7.51□□□□□ -1.21
TP53-227ENST00000622645 LINC00476Q8WZB0 136 aa7.51□□□□□ -1.21
TP53-227ENST00000622645 SPRR4Q96PI1 79 aa7.51□□□□□ -1.21
TP53-227ENST00000622645 NBDYA0A0U1RRE5 68 aa7.5□□□□□ -1.21
TP53-227ENST00000622645 A0A1B0GW54 56 aa7.49□□□□□ -1.21
TP53-227ENST00000622645 C9orf163Q8N9P6 203 aa7.49□□□□□ -1.21
TP53-227ENST00000622645 SRRM2Q9UQ35 2752 aaKnown RBP7.49□□□□□ -1.21
TP53-227ENST00000622645 F8WEM9 126 aa7.48□□□□□ -1.21
TP53-227ENST00000622645 IGFL1Q6UW32 110 aa7.48□□□□□ -1.21
TP53-227ENST00000622645 DYNC2H1Q8NCM8 4307 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms