RNA–Protein interactions for RNA: ENST00000622098.4

CDK16-223, Transcript of cyclin dependent kinase 16, human

TSL 2 BASIC

Gene CDK16, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-223	ENST00000622098	C7orf33	Q8WU49	177 aa		11.58	□□□□□ -0.56
CDK16-223	ENST00000622098	KCNQ1DN	Q9H478	68 aa		11.58	□□□□□ -0.56
CDK16-223	ENST00000622098	FLNB	O75369	2602 aa	Known RBP	11.57	□□□□□ -0.56
CDK16-223	ENST00000622098	F8	P00451	2351 aa		11.57	□□□□□ -0.56
CDK16-223	ENST00000622098		F8WDY8	70 aa		11.56	□□□□□ -0.56
CDK16-223	ENST00000622098	SNURF	Q9Y675	71 aa		11.56	□□□□□ -0.56
CDK16-223	ENST00000622098		Q8N9L7	120 aa		11.55	□□□□□ -0.56
CDK16-223	ENST00000622098		H7BZZ5	65 aa		11.55	□□□□□ -0.56
CDK16-223	ENST00000622098	TM2D3	Q9BRN9	247 aa		11.55	□□□□□ -0.56
CDK16-223	ENST00000622098	NOTCH1	P46531	2555 aa		11.54	□□□□□ -0.56
CDK16-223	ENST00000622098	C3orf84	H3BNL1	204 aa		11.54	□□□□□ -0.56
CDK16-223	ENST00000622098	RPL37AP8	A6NKH3	93 aa		11.53	□□□□□ -0.56
CDK16-223	ENST00000622098	DNAH10OS	P0CZ25	163 aa		11.53	□□□□□ -0.56
CDK16-223	ENST00000622098	FAM236D	A0A1B0GTK5	79 aa		11.53	□□□□□ -0.56
CDK16-223	ENST00000622098	FAM236C	P0DP71	79 aa		11.53	□□□□□ -0.56
CDK16-223	ENST00000622098	KLKP1	Q107X0	134 aa		11.53	□□□□□ -0.56
CDK16-223	ENST00000622098		Q8N377	158 aa		11.53	□□□□□ -0.56
CDK16-223	ENST00000622098	MAST4	O15021	2626 aa		11.53	□□□□□ -0.56
CDK16-223	ENST00000622098	NREP	Q16612	68 aa		11.52	□□□□□ -0.57
CDK16-223	ENST00000622098	RMI2	Q96E14	147 aa		11.52	□□□□□ -0.57
CDK16-223	ENST00000622098	CMYA5	Q8N3K9	4069 aa		11.52	□□□□□ -0.57
CDK16-223	ENST00000622098	FAM168B	A1KXE4	195 aa		11.52	□□□□□ -0.57
CDK16-223	ENST00000622098	FBN1	P35555	2871 aa	Known RBP	11.5	□□□□□ -0.57
CDK16-223	ENST00000622098	CASC10	Q5T4H9	136 aa		11.5	□□□□□ -0.57
CDK16-223	ENST00000622098	BPY2	O14599	106 aa		11.49	□□□□□ -0.57
CDK16-223	ENST00000622098	TLX1NB	P0CAT3	122 aa		11.48	□□□□□ -0.57
CDK16-223	ENST00000622098		Q6ZRX8	168 aa		11.48	□□□□□ -0.57
CDK16-223	ENST00000622098	IGKV4-1	P06312	121 aa		11.47	□□□□□ -0.57
CDK16-223	ENST00000622098		Q9BRP9	147 aa		11.47	□□□□□ -0.57
CDK16-223	ENST00000622098	KRTAP24-1	Q3LI83	254 aa		11.47	□□□□□ -0.57
CDK16-223	ENST00000622098	MRAP	Q8TCY5	172 aa		11.47	□□□□□ -0.57
CDK16-223	ENST00000622098	LINC00588	Q9Y4M8	146 aa		11.47	□□□□□ -0.57
CDK16-223	ENST00000622098	IGLV5-48	A0A075B6I7	105 aa		11.46	□□□□□ -0.57
CDK16-223	ENST00000622098		F8WEM9	126 aa		11.46	□□□□□ -0.57
CDK16-223	ENST00000622098	DHRS4-AS1	Q9P1J3	65 aa		11.46	□□□□□ -0.57
CDK16-223	ENST00000622098	IGLV1-50	A0A075B6I6	118 aa		11.45	□□□□□ -0.58
CDK16-223	ENST00000622098	ETDC	A0A1B0GVM5	59 aa		11.45	□□□□□ -0.58
CDK16-223	ENST00000622098	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	11.44	□□□□□ -0.58
CDK16-223	ENST00000622098	PLA2G2D	Q9UNK4	145 aa		11.44	□□□□□ -0.58
CDK16-223	ENST00000622098	ST20-AS1	Q8NBB2	130 aa		11.44	□□□□□ -0.58
CDK16-223	ENST00000622098	KRTAP7-1	Q8IUC3	87 aa		11.43	□□□□□ -0.58
CDK16-223	ENST00000622098	PRY	O14603	147 aa		11.43	□□□□□ -0.58
CDK16-223	ENST00000622098	C4orf26	Q17RF5	130 aa		11.42	□□□□□ -0.58
CDK16-223	ENST00000622098	BAHCC1	Q9P281	2608 aa		11.42	□□□□□ -0.58
CDK16-223	ENST00000622098	FUS	P35637	526 aa	Known RBP eCLIP	11.42	□□□□□ -0.58
CDK16-223	ENST00000622098		Q5XG85	94 aa		11.42	□□□□□ -0.58
CDK16-223	ENST00000622098	PRB2	P02812	416 aa	Predicted RBP	11.41	□□□□□ -0.58
CDK16-223	ENST00000622098	DNAH3	Q8TD57	4116 aa		11.41	□□□□□ -0.58
CDK16-223	ENST00000622098	SPRR1A	P35321	89 aa		11.4	□□□□□ -0.58
CDK16-223	ENST00000622098	IGLV5-37	A0A075B6J1	123 aa		11.4	□□□□□ -0.58
CDK16-223	ENST00000622098		A0A1W2PNM2	257 aa		11.4	□□□□□ -0.58
CDK16-223	ENST00000622098	C5orf47	Q569G3	176 aa		11.4	□□□□□ -0.58
CDK16-223	ENST00000622098	TMEM254	Q8TBM7	123 aa		11.4	□□□□□ -0.58
CDK16-223	ENST00000622098	C1orf137	Q5JT78	98 aa		11.4	□□□□□ -0.59
CDK16-223	ENST00000622098	SERP1	Q9Y6X1	66 aa		11.4	□□□□□ -0.59
CDK16-223	ENST00000622098	MRPL55	Q7Z7F7	128 aa	Known RBP	11.39	□□□□□ -0.59
CDK16-223	ENST00000622098	ERC2-IT1	O76042	136 aa		11.38	□□□□□ -0.59
CDK16-223	ENST00000622098	NBEAL1	Q6ZS30	2694 aa		11.38	□□□□□ -0.59
CDK16-223	ENST00000622098	DNAH1	Q9P2D7	4330 aa		11.37	□□□□□ -0.59
CDK16-223	ENST00000622098	TNP2	Q05952	138 aa		11.37	□□□□□ -0.59
CDK16-223	ENST00000622098	NDUFC1	O43677	76 aa		11.37	□□□□□ -0.59
CDK16-223	ENST00000622098	OCR1	Q9BZK8	76 aa		11.37	□□□□□ -0.59
CDK16-223	ENST00000622098	UBE2B	P63146	152 aa		11.36	□□□□□ -0.59
CDK16-223	ENST00000622098	HRCT1	Q6UXD1	115 aa		11.35	□□□□□ -0.59
CDK16-223	ENST00000622098	EPM2A	B3EWF7	344 aa		11.35	□□□□□ -0.59
CDK16-223	ENST00000622098		Q8NBF4	154 aa		11.34	□□□□□ -0.59
CDK16-223	ENST00000622098	COL6A5	A8TX70	2615 aa		11.32	□□□□□ -0.6
CDK16-223	ENST00000622098		A0A1B0GW54	56 aa		11.32	□□□□□ -0.6
CDK16-223	ENST00000622098	REG3G	Q6UW15	175 aa		11.31	□□□□□ -0.6
CDK16-223	ENST00000622098	SMIM29	Q86T20	159 aa		11.31	□□□□□ -0.6
CDK16-223	ENST00000622098	SPRR4	Q96PI1	79 aa		11.29	□□□□□ -0.6
CDK16-223	ENST00000622098		A0A0U1RQV1	116 aa		11.28	□□□□□ -0.6
CDK16-223	ENST00000622098	HUWE1	Q7Z6Z7	4374 aa	Known RBP	11.28	□□□□□ -0.6
CDK16-223	ENST00000622098	LYST	Q99698	3801 aa		11.28	□□□□□ -0.6
CDK16-223	ENST00000622098	FAM30A	Q9NZY2	134 aa		11.28	□□□□□ -0.6
CDK16-223	ENST00000622098	HIGD2A	Q9BW72	106 aa		11.27	□□□□□ -0.61
CDK16-223	ENST00000622098	IGKV2-24	A0A0C4DH68	120 aa		11.26	□□□□□ -0.61
CDK16-223	ENST00000622098		A0A0G2JQZ4	141 aa		11.26	□□□□□ -0.61
CDK16-223	ENST00000622098		A0A1W2PNN7	141 aa		11.26	□□□□□ -0.61
CDK16-223	ENST00000622098	DNAH10	Q8IVF4	4471 aa		11.26	□□□□□ -0.61
CDK16-223	ENST00000622098	ATP5E	P56381	51 aa	Predicted RBP	11.25	□□□□□ -0.61
CDK16-223	ENST00000622098	DSCR10	P59022	87 aa		11.25	□□□□□ -0.61
CDK16-223	ENST00000622098	LINC00476	Q8WZB0	136 aa		11.25	□□□□□ -0.61
CDK16-223	ENST00000622098		A0A096LNI7	61 aa		11.23	□□□□□ -0.61
CDK16-223	ENST00000622098		K7EQZ3	153 aa		11.23	□□□□□ -0.61
CDK16-223	ENST00000622098	PRLH	P81277	87 aa		11.23	□□□□□ -0.61
CDK16-223	ENST00000622098		K7EIL1	84 aa		11.22	□□□□□ -0.61
CDK16-223	ENST00000622098	FP248	Q71RG6	208 aa	Predicted RBP	11.22	□□□□□ -0.61
CDK16-223	ENST00000622098	SMIM26	A0A096LP01	95 aa		11.22	□□□□□ -0.61
CDK16-223	ENST00000622098	KRTAP1-5	Q9BYS1	174 aa		11.22	□□□□□ -0.61
CDK16-223	ENST00000622098	STAB2	Q8WWQ8	2551 aa		11.2	□□□□□ -0.62
CDK16-223	ENST00000622098	MGAM2	Q2M2H8	2515 aa		11.19	□□□□□ -0.62
CDK16-223	ENST00000622098	LINC00474	Q9P2X8	69 aa		11.19	□□□□□ -0.62
CDK16-223	ENST00000622098	IGFL1	Q6UW32	110 aa		11.19	□□□□□ -0.62
CDK16-223	ENST00000622098	C16orf90	A8MZG2	172 aa		11.19	□□□□□ -0.62
CDK16-223	ENST00000622098	PSCA	O43653	123 aa		11.18	□□□□□ -0.62
CDK16-223	ENST00000622098	DEFB116	Q30KQ4	102 aa		11.17	□□□□□ -0.62
CDK16-223	ENST00000622098	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	11.16	□□□□□ -0.62
CDK16-223	ENST00000622098	CSMD3	Q7Z407	3707 aa		11.15	□□□□□ -0.62
CDK16-223	ENST00000622098	SRRM2	Q9UQ35	2752 aa	Known RBP	11.15	□□□□□ -0.62

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