RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 GNG13Q9P2W3 67 aa1.07□□□□□ -2.24
CPNE3-211ENST00000621526 LAMTOR2Q9Y2Q5 125 aa1.07□□□□□ -2.24
CPNE3-211ENST00000621526 CBY1Q9Y3M2 126 aa1.07□□□□□ -2.24
CPNE3-211ENST00000621526 TEX49A0A1B0GTD5 131 aa1.06□□□□□ -2.24
CPNE3-211ENST00000621526 D6R8Y8 96 aa1.06□□□□□ -2.24
CPNE3-211ENST00000621526 TMEM250H0YL14 139 aa1.06□□□□□ -2.24
CPNE3-211ENST00000621526 ATP6V1G1O75348 118 aa1.06□□□□□ -2.24
CPNE3-211ENST00000621526 NPYP01303 97 aa1.06□□□□□ -2.24
CPNE3-211ENST00000621526 SPINK8P0C7L1 97 aa1.06□□□□□ -2.24
CPNE3-211ENST00000621526 DDTP30046 118 aa1.06□□□□□ -2.24
CPNE3-211ENST00000621526 PMVKQ15126 192 aa1.06□□□□□ -2.24
CPNE3-211ENST00000621526 TAL2Q16559 108 aa1.06□□□□□ -2.24
CPNE3-211ENST00000621526 KRTAP8-1Q8IUC2 63 aa1.06□□□□□ -2.24
CPNE3-211ENST00000621526 ORMDL3Q8N138 153 aa1.06□□□□□ -2.24
CPNE3-211ENST00000621526 Q8N8P6 123 aa1.06□□□□□ -2.24
CPNE3-211ENST00000621526 FAM218AQ96MZ4 157 aa1.06□□□□□ -2.24
CPNE3-211ENST00000621526 SPRR2GQ9BYE4 73 aa1.06□□□□□ -2.24
CPNE3-211ENST00000621526 CST9LQ9H4G1 147 aa1.06□□□□□ -2.24
CPNE3-211ENST00000621526 DHRS4-AS1Q9P1J3 65 aa1.06□□□□□ -2.24
CPNE3-211ENST00000621526 NAT8BQ9UHF3 227 aa1.06□□□□□ -2.24
CPNE3-211ENST00000621526 A0A1B0GV50 99 aa1.05□□□□□ -2.24
CPNE3-211ENST00000621526 ZNF815PA8K554 130 aa1.05□□□□□ -2.24
CPNE3-211ENST00000621526 ZNF73O43830 326 aaPredicted RBP1.05□□□□□ -2.24
CPNE3-211ENST00000621526 NDUFC2O95298 119 aa1.05□□□□□ -2.24
CPNE3-211ENST00000621526 GIPP09681 153 aaPredicted RBP1.05□□□□□ -2.24
CPNE3-211ENST00000621526 RPL23P62829 140 aaKnown RBP1.05□□□□□ -2.24
CPNE3-211ENST00000621526 FAM74A3Q4VXF1 159 aa1.05□□□□□ -2.24
CPNE3-211ENST00000621526 TOMM6Q96B49 74 aa1.05□□□□□ -2.24
CPNE3-211ENST00000621526 PRELID3AQ96N28 172 aa1.05□□□□□ -2.24
CPNE3-211ENST00000621526 SMIM27A0A1W2PRY6 76 aa1.04□□□□□ -2.24
CPNE3-211ENST00000621526 HERV-K104P63124 156 aa1.04□□□□□ -2.24
CPNE3-211ENST00000621526 S100A7L2Q5SY68 101 aa1.04□□□□□ -2.24
CPNE3-211ENST00000621526 LCE1DQ5T752 114 aa1.04□□□□□ -2.24
CPNE3-211ENST00000621526 SCGB3A1Q96QR1 104 aa1.04□□□□□ -2.24
CPNE3-211ENST00000621526 MAP1LC3CQ9BXW4 147 aa1.04□□□□□ -2.24
CPNE3-211ENST00000621526 MAP1LC3AQ9H492 121 aa1.04□□□□□ -2.24
CPNE3-211ENST00000621526 NXT2Q9NPJ8 142 aaKnown RBP1.04□□□□□ -2.24
CPNE3-211ENST00000621526 V9GYV3 84 aa1.04□□□□□ -2.24
CPNE3-211ENST00000621526 AHNAKQ09666 5890 aaKnown RBP1.04□□□□□ -2.24
CPNE3-211ENST00000621526 IGLV5-48A0A075B6I7 105 aa1.03□□□□□ -2.24
CPNE3-211ENST00000621526 TRAV23DV6A0A075B6W5 121 aa1.03□□□□□ -2.24
CPNE3-211ENST00000621526 A0A1B0GXF2 115 aa1.03□□□□□ -2.24
CPNE3-211ENST00000621526 LST1O00453 97 aa1.03□□□□□ -2.24
CPNE3-211ENST00000621526 NCR3O14931 201 aa1.03□□□□□ -2.24
CPNE3-211ENST00000621526 SMIM13P0DJ93 91 aa1.03□□□□□ -2.24
CPNE3-211ENST00000621526 IGLC3P0DOY3 106 aa1.03□□□□□ -2.24
CPNE3-211ENST00000621526 SMCPP49901 116 aaPredicted RBP1.03□□□□□ -2.24
CPNE3-211ENST00000621526 CEBPGP53567 150 aa1.03□□□□□ -2.24
CPNE3-211ENST00000621526 KRTAP12-2P59991 146 aa1.03□□□□□ -2.24
CPNE3-211ENST00000621526 ZNF345Q14585 488 aa1.03□□□□□ -2.24
CPNE3-211ENST00000621526 RGS21Q2M5E4 152 aa1.03□□□□□ -2.24
CPNE3-211ENST00000621526 MEIG1Q5JSS6 88 aa1.03□□□□□ -2.24
CPNE3-211ENST00000621526 MIR7-3HGQ8N6C7 128 aa1.03□□□□□ -2.24
CPNE3-211ENST00000621526 SPANXB1Q9NS25 103 aaPredicted RBP1.03□□□□□ -2.24
CPNE3-211ENST00000621526 TRBV7-6A0A0J9YX20 115 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 TRBV7-7A0A0K0K1E9 115 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 A0A0U1RRA0 63 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 SPRR5A0A1B0GTR4 108 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 A0A1W2PNM2 257 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 LINC01546A6NGU7 62 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 ARPC5O15511 151 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 ZNF22P17026 224 aaPredicted RBP1.02□□□□□ -2.25
CPNE3-211ENST00000621526 ADCYAP1P18509 176 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 SPINK7P58062 85 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 LINC00313P59037 77 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 IFITM3Q01628 133 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 IFITM2Q01629 132 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 H1FX-AS1Q4G0G2 97 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 LCE4AQ5TA78 99 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 Q6JHZ5 121 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 KRTAP5-3Q6L8H2 238 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 ATP5L2Q7Z4Y8 100 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 DEFB105AQ8NG35 78 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 IMUPQ9GZP8 106 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 PRO2289Q9P1D8 64 aa1.02□□□□□ -2.25
CPNE3-211ENST00000621526 KANTRA0A1W2PQU2 76 aa1.01□□□□□ -2.25
CPNE3-211ENST00000621526 RHEBQ15382 184 aa1.01□□□□□ -2.25
CPNE3-211ENST00000621526 MRPL54Q6P161 138 aaKnown RBP1.01□□□□□ -2.25
CPNE3-211ENST00000621526 SMIM7Q9BQ49 75 aa1.01□□□□□ -2.25
CPNE3-211ENST00000621526 MYMXA0A1B0GTQ4 84 aa1□□□□□ -2.25
CPNE3-211ENST00000621526 A4D1N5 150 aa1□□□□□ -2.25
CPNE3-211ENST00000621526 COX7BP24311 80 aa1□□□□□ -2.25
CPNE3-211ENST00000621526 ELOF1P60002 83 aaKnown RBP1□□□□□ -2.25
CPNE3-211ENST00000621526 BLOC1S1P78537 153 aa1□□□□□ -2.25
CPNE3-211ENST00000621526 OCIAD2Q56VL3 154 aa1□□□□□ -2.25
CPNE3-211ENST00000621526 TMEM170BQ5T4T1 132 aa1□□□□□ -2.25
CPNE3-211ENST00000621526 SOSTDC1Q6X4U4 206 aa1□□□□□ -2.25
CPNE3-211ENST00000621526 SLC51BQ86UW2 128 aa1□□□□□ -2.25
CPNE3-211ENST00000621526 COMMD7Q86VX2 200 aa1□□□□□ -2.25
CPNE3-211ENST00000621526 BAGE3Q86Y29 109 aa1□□□□□ -2.25
CPNE3-211ENST00000621526 TCTE3Q8IZS6 198 aa1□□□□□ -2.25
CPNE3-211ENST00000621526 ANAPC16Q96DE5 110 aa1□□□□□ -2.25
CPNE3-211ENST00000621526 SS18L2Q9UHA2 77 aa1□□□□□ -2.25
CPNE3-211ENST00000621526 TRAV13-2A0A0B4J235 113 aa0.99□□□□□ -2.25
CPNE3-211ENST00000621526 KRTAP4-8A0A0G2JLE6 195 aa0.99□□□□□ -2.25
CPNE3-211ENST00000621526 A0A1B0GWB2 263 aa0.99□□□□□ -2.25
CPNE3-211ENST00000621526 TMEM223A0PJW6 202 aa0.99□□□□□ -2.25
CPNE3-211ENST00000621526 C11orf86A6NJI1 115 aa0.99□□□□□ -2.25
CPNE3-211ENST00000621526 SMLR1H3BR10 107 aa0.99□□□□□ -2.25
CPNE3-211ENST00000621526 C3orf79P0CE67 100 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms