RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 CTAG1AP78358 180 aa6.42□□□□□ -1.38
CPNE3-210ENST00000621245 MOBPQ13875 183 aa6.42□□□□□ -1.38
CPNE3-210ENST00000621245 GAGE2AQ6NT46 116 aa6.42□□□□□ -1.38
CPNE3-210ENST00000621245 IGLV9-49A0A0B4J1Y8 123 aa6.41□□□□□ -1.38
CPNE3-210ENST00000621245 SERF1AO75920 110 aa6.41□□□□□ -1.38
CPNE3-210ENST00000621245 TRGC2P03986 189 aa6.41□□□□□ -1.38
CPNE3-210ENST00000621245 SOSTDC1Q6X4U4 206 aa6.41□□□□□ -1.38
CPNE3-210ENST00000621245 FP248Q71RG6 208 aaPredicted RBP6.41□□□□□ -1.38
CPNE3-210ENST00000621245 MYMXA0A1B0GTQ4 84 aa6.4□□□□□ -1.38
CPNE3-210ENST00000621245 LEPROTO15243 131 aa6.4□□□□□ -1.38
CPNE3-210ENST00000621245 NDUFA5Q16718 116 aa6.4□□□□□ -1.38
CPNE3-210ENST00000621245 LOC107984156A0A0G2JMH3 177 aa6.39□□□□□ -1.39
CPNE3-210ENST00000621245 DDTP30046 118 aa6.39□□□□□ -1.39
CPNE3-210ENST00000621245 NPC2P61916 151 aa6.39□□□□□ -1.39
CPNE3-210ENST00000621245 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
CPNE3-210ENST00000621245 ARL17AQ8IVW1 177 aa6.39□□□□□ -1.39
CPNE3-210ENST00000621245 Q8N377 158 aa6.39□□□□□ -1.39
CPNE3-210ENST00000621245 J3QQQ9 107 aa6.38□□□□□ -1.39
CPNE3-210ENST00000621245 LEPROTL1O95214 131 aa6.38□□□□□ -1.39
CPNE3-210ENST00000621245 Q75L30 129 aa6.38□□□□□ -1.39
CPNE3-210ENST00000621245 FLGP20930 4061 aaPredicted RBP6.37□□□□□ -1.39
CPNE3-210ENST00000621245 SPINK1P00995 79 aa6.37□□□□□ -1.39
CPNE3-210ENST00000621245 IGLV6-57P01721 117 aa6.37□□□□□ -1.39
CPNE3-210ENST00000621245 FABP4P15090 132 aa6.37□□□□□ -1.39
CPNE3-210ENST00000621245 ASB16-AS1Q495Z4 193 aa6.37□□□□□ -1.39
CPNE3-210ENST00000621245 ADAMTSL4-AS1Q5T5F5 129 aa6.37□□□□□ -1.39
CPNE3-210ENST00000621245 Q6ZRX8 168 aa6.37□□□□□ -1.39
CPNE3-210ENST00000621245 ST20-AS1Q8NBB2 130 aa6.37□□□□□ -1.39
CPNE3-210ENST00000621245 TRBV10-2A0A0K0K1G8 114 aa6.36□□□□□ -1.39
CPNE3-210ENST00000621245 DPM2O94777 84 aa6.36□□□□□ -1.39
CPNE3-210ENST00000621245 MAP1LC3CQ9BXW4 147 aa6.36□□□□□ -1.39
CPNE3-210ENST00000621245 SPANXB1Q9NS25 103 aaPredicted RBP6.36□□□□□ -1.39
CPNE3-210ENST00000621245 PLNP26678 52 aa6.35□□□□□ -1.39
CPNE3-210ENST00000621245 TRAV23DV6A0A075B6W5 121 aa6.34□□□□□ -1.39
CPNE3-210ENST00000621245 A0A0J9YXY3 114 aa6.34□□□□□ -1.39
CPNE3-210ENST00000621245 LINC00587B1AMM8 73 aa6.34□□□□□ -1.39
CPNE3-210ENST00000621245 IGKCP01834 107 aa6.34□□□□□ -1.39
CPNE3-210ENST00000621245 C5orf52A6NGY3 159 aa6.33□□□□□ -1.4
CPNE3-210ENST00000621245 LGALS3P17931 250 aaKnown RBP6.33□□□□□ -1.4
CPNE3-210ENST00000621245 FSIP2Q5CZC0 6907 aa6.32□□□□□ -1.4
CPNE3-210ENST00000621245 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.32□□□□□ -1.4
CPNE3-210ENST00000621245 NDUFC2O95298 119 aa6.32□□□□□ -1.4
CPNE3-210ENST00000621245 NMUP48645 174 aa6.32□□□□□ -1.4
CPNE3-210ENST00000621245 S100A7L2Q5SY68 101 aa6.32□□□□□ -1.4
CPNE3-210ENST00000621245 C9orf153Q5TBE3 101 aa6.32□□□□□ -1.4
CPNE3-210ENST00000621245 SSBP3-AS1Q7Z2R9 100 aa6.32□□□□□ -1.4
CPNE3-210ENST00000621245 LITAFQ99732 161 aa6.32□□□□□ -1.4
CPNE3-210ENST00000621245 HSPB8Q9UJY1 196 aa6.32□□□□□ -1.4
CPNE3-210ENST00000621245 COLCA2A8K830 154 aa6.31□□□□□ -1.4
CPNE3-210ENST00000621245 HERVK_113P61574 105 aa6.31□□□□□ -1.4
CPNE3-210ENST00000621245 SLC7A5P1Q8MH63 180 aa6.31□□□□□ -1.4
CPNE3-210ENST00000621245 MIEN1Q9BRT3 115 aa6.31□□□□□ -1.4
CPNE3-210ENST00000621245 CRCT1Q9UGL9 99 aa6.31□□□□□ -1.4
CPNE3-210ENST00000621245 ZNF73O43830 326 aaPredicted RBP6.3□□□□□ -1.4
CPNE3-210ENST00000621245 RPS29P62273 56 aaKnown RBP6.3□□□□□ -1.4
CPNE3-210ENST00000621245 S100A12P80511 92 aa6.3□□□□□ -1.4
CPNE3-210ENST00000621245 E9PLD3 99 aa6.29□□□□□ -1.4
CPNE3-210ENST00000621245 SLC25A20O43772 301 aa6.29□□□□□ -1.4
CPNE3-210ENST00000621245 TTTY13Q9BZ97 58 aa6.29□□□□□ -1.4
CPNE3-210ENST00000621245 KRTAP19-2Q3LHN2 52 aa6.28□□□□□ -1.4
CPNE3-210ENST00000621245 KRTAP9-4Q9BYQ2 154 aa6.28□□□□□ -1.4
CPNE3-210ENST00000621245 HRCT1Q6UXD1 115 aa6.27□□□□□ -1.41
CPNE3-210ENST00000621245 LINC00308Q8TCZ7 52 aa6.27□□□□□ -1.41
CPNE3-210ENST00000621245 LCE3BQ5TA77 95 aa6.26□□□□□ -1.41
CPNE3-210ENST00000621245 KRTAP9-9Q9BYP9 154 aa6.26□□□□□ -1.41
CPNE3-210ENST00000621245 SYS1-DBNDD2H3BUS1 97 aa6.25□□□□□ -1.41
CPNE3-210ENST00000621245 LINC01547P58512 204 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-210ENST00000621245 JOSD1Q15040 202 aaPredicted RBP6.25□□□□□ -1.41
CPNE3-210ENST00000621245 C9orf92A6NGG3 77 aa6.24□□□□□ -1.41
CPNE3-210ENST00000621245 HIST1H2BKO60814 126 aa6.24□□□□□ -1.41
CPNE3-210ENST00000621245 HIST1H2BJP06899 126 aa6.24□□□□□ -1.41
CPNE3-210ENST00000621245 SPRR1BP22528 89 aa6.24□□□□□ -1.41
CPNE3-210ENST00000621245 HIST1H2BOP23527 126 aa6.24□□□□□ -1.41
CPNE3-210ENST00000621245 HIST1H2BBP33778 126 aa6.24□□□□□ -1.41
CPNE3-210ENST00000621245 HIST1H2BDP58876 126 aa6.24□□□□□ -1.41
CPNE3-210ENST00000621245 HIST1H2BCP62807 126 aa6.24□□□□□ -1.41
CPNE3-210ENST00000621245 HIST2H2BEQ16778 126 aa6.24□□□□□ -1.41
CPNE3-210ENST00000621245 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.24□□□□□ -1.41
CPNE3-210ENST00000621245 OR13C6PQ8NH95 151 aa6.24□□□□□ -1.41
CPNE3-210ENST00000621245 HIST1H2BHQ93079 126 aa6.24□□□□□ -1.41
CPNE3-210ENST00000621245 HIST1H2BNQ99877 126 aa6.24□□□□□ -1.41
CPNE3-210ENST00000621245 HIST1H2BMQ99879 126 aa6.24□□□□□ -1.41
CPNE3-210ENST00000621245 SPANXCQ9NY87 97 aa6.24□□□□□ -1.41
CPNE3-210ENST00000621245 LINC01545Q5VT33 79 aa6.23□□□□□ -1.41
CPNE3-210ENST00000621245 A0A0G2JQZ4 141 aa6.22□□□□□ -1.41
CPNE3-210ENST00000621245 ZNF815PA8K554 130 aa6.22□□□□□ -1.41
CPNE3-210ENST00000621245 TIMM17BO60830 172 aa6.21□□□□□ -1.42
CPNE3-210ENST00000621245 ELOF1P60002 83 aaKnown RBP6.21□□□□□ -1.42
CPNE3-210ENST00000621245 Q1RN00 199 aa6.21□□□□□ -1.42
CPNE3-210ENST00000621245 C6orf99Q4VX62 202 aa6.21□□□□□ -1.42
CPNE3-210ENST00000621245 PCOTHQ58A44 107 aa6.21□□□□□ -1.42
CPNE3-210ENST00000621245 H7C2G1 150 aa6.2□□□□□ -1.42
CPNE3-210ENST00000621245 MT1HP80294 61 aa6.2□□□□□ -1.42
CPNE3-210ENST00000621245 SPANXDQ9BXN6 97 aa6.2□□□□□ -1.42
CPNE3-210ENST00000621245 C3orf79P0CE67 100 aa6.19□□□□□ -1.42
CPNE3-210ENST00000621245 COX7BP24311 80 aa6.19□□□□□ -1.42
CPNE3-210ENST00000621245 SMIM29Q86T20 159 aa6.19□□□□□ -1.42
CPNE3-210ENST00000621245 DEFB105AQ8NG35 78 aa6.19□□□□□ -1.42
CPNE3-210ENST00000621245 KRTAP9-3Q9BYQ3 159 aa6.19□□□□□ -1.42
CPNE3-210ENST00000621245 DHRS4-AS1Q9P1J3 65 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms