RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 XAGE1AQ9HD64 81 aa12.92□□□□□ -0.34
LAPTM4B-204ENST00000619747 HUWE1Q7Z6Z7 4374 aaKnown RBP12.91□□□□□ -0.34
LAPTM4B-204ENST00000619747 IGKV2D-24A0A075B6R9 120 aa12.9□□□□□ -0.34
LAPTM4B-204ENST00000619747 COX17Q14061 63 aa12.9□□□□□ -0.34
LAPTM4B-204ENST00000619747 TM2D3Q9BRN9 247 aa12.9□□□□□ -0.34
LAPTM4B-204ENST00000619747 TENM2Q9NT68 2774 aa12.9□□□□□ -0.34
LAPTM4B-204ENST00000619747 ZNF561-AS1K7EIQ3 104 aa12.89□□□□□ -0.35
LAPTM4B-204ENST00000619747 C6orf48Q9UBA6 75 aa12.89□□□□□ -0.35
LAPTM4B-204ENST00000619747 LINC01547P58512 204 aaPredicted RBP12.88□□□□□ -0.35
LAPTM4B-204ENST00000619747 M0R2N4 97 aa12.87□□□□□ -0.35
LAPTM4B-204ENST00000619747 MDFIQ99750 246 aa12.87□□□□□ -0.35
LAPTM4B-204ENST00000619747 BCE1O60756 84 aa12.87□□□□□ -0.35
LAPTM4B-204ENST00000619747 LYSTQ99698 3801 aa12.87□□□□□ -0.35
LAPTM4B-204ENST00000619747 CAMK2N2Q96S95 79 aa12.86□□□□□ -0.35
LAPTM4B-204ENST00000619747 KRTAP26-1Q6PEX3 210 aa12.86□□□□□ -0.35
LAPTM4B-204ENST00000619747 TMEM256-PLSCR3K7ERE1 68 aa12.85□□□□□ -0.35
LAPTM4B-204ENST00000619747 Q8N814 137 aa12.85□□□□□ -0.35
LAPTM4B-204ENST00000619747 NDUFC1O43677 76 aa12.83□□□□□ -0.36
LAPTM4B-204ENST00000619747 Q6ZRU5 148 aa12.82□□□□□ -0.36
LAPTM4B-204ENST00000619747 C15orf56Q8N910 161 aa12.82□□□□□ -0.36
LAPTM4B-204ENST00000619747 PMAIP1Q13794 54 aa12.82□□□□□ -0.36
LAPTM4B-204ENST00000619747 LINC01556Q5JQF7 62 aa12.82□□□□□ -0.36
LAPTM4B-204ENST00000619747 LINC00588Q9Y4M8 146 aa12.82□□□□□ -0.36
LAPTM4B-204ENST00000619747 TRBV7-4A0A0J9YYF1 115 aa12.81□□□□□ -0.36
LAPTM4B-204ENST00000619747 C6orf99Q4VX62 202 aa12.81□□□□□ -0.36
LAPTM4B-204ENST00000619747 Q6ZVQ6 151 aa12.81□□□□□ -0.36
LAPTM4B-204ENST00000619747 LINC00167Q96N53 147 aa12.81□□□□□ -0.36
LAPTM4B-204ENST00000619747 ATP5EP56381 51 aaPredicted RBP12.8□□□□□ -0.36
LAPTM4B-204ENST00000619747 SCXQ7RTU7 201 aa12.8□□□□□ -0.36
LAPTM4B-204ENST00000619747 Q6ZQT0 140 aa12.79□□□□□ -0.36
LAPTM4B-204ENST00000619747 TMEM254Q8TBM7 123 aa12.77□□□□□ -0.36
LAPTM4B-204ENST00000619747 CASC10Q5T4H9 136 aa12.76□□□□□ -0.37
LAPTM4B-204ENST00000619747 NREPQ16612 68 aa12.75□□□□□ -0.37
LAPTM4B-204ENST00000619747 GVQW2A0A096LPI5 108 aaPredicted RBP12.74□□□□□ -0.37
LAPTM4B-204ENST00000619747 DNAH10OSP0CZ25 163 aa12.74□□□□□ -0.37
LAPTM4B-204ENST00000619747 LAMTOR3Q9UHA4 124 aa12.74□□□□□ -0.37
LAPTM4B-204ENST00000619747 LRCOL1A6NCL2 159 aa12.72□□□□□ -0.37
LAPTM4B-204ENST00000619747 Q6ZRP5 223 aa12.7□□□□□ -0.38
LAPTM4B-204ENST00000619747 CSMD3Q7Z407 3707 aa12.7□□□□□ -0.38
LAPTM4B-204ENST00000619747 PRR15Q8IV56 129 aa12.7□□□□□ -0.38
LAPTM4B-204ENST00000619747 CXCL6P80162 114 aa12.69□□□□□ -0.38
LAPTM4B-204ENST00000619747 SYCNQ0VAF6 134 aa12.69□□□□□ -0.38
LAPTM4B-204ENST00000619747 IGLV6-57P01721 117 aa12.68□□□□□ -0.38
LAPTM4B-204ENST00000619747 FUSP35637 526 aaKnown RBP eCLIP12.68□□□□□ -0.386e-9■□□□□ 10.6
LAPTM4B-204ENST00000619747 BPY2O14599 106 aa12.67□□□□□ -0.38
LAPTM4B-204ENST00000619747 DNAH9Q9NYC9 4486 aa12.67□□□□□ -0.38
LAPTM4B-204ENST00000619747 LOC110117498A0A087WWA1 95 aa12.66□□□□□ -0.38
LAPTM4B-204ENST00000619747 PRYO14603 147 aa12.65□□□□□ -0.38
LAPTM4B-204ENST00000619747 MUC7Q8TAX7 377 aa12.65□□□□□ -0.38
LAPTM4B-204ENST00000619747 DNAH10Q8IVF4 4471 aa12.65□□□□□ -0.38
LAPTM4B-204ENST00000619747 VPREB1P12018 145 aa12.64□□□□□ -0.39
LAPTM4B-204ENST00000619747 LINC00575Q6W349 94 aa12.64□□□□□ -0.39
LAPTM4B-204ENST00000619747 Q8N9L7 120 aa12.64□□□□□ -0.39
LAPTM4B-204ENST00000619747 DNAH7Q8WXX0 4024 aa12.61□□□□□ -0.39
LAPTM4B-204ENST00000619747 HIGD2AQ9BW72 106 aa12.61□□□□□ -0.39
LAPTM4B-204ENST00000619747 ZNF73O43830 326 aaPredicted RBP12.6□□□□□ -0.39
LAPTM4B-204ENST00000619747 DIRC1Q969H9 104 aa12.59□□□□□ -0.39
LAPTM4B-204ENST00000619747 PSPHP1O15172 72 aa12.59□□□□□ -0.39
LAPTM4B-204ENST00000619747 Q6ZQY7 126 aa12.59□□□□□ -0.39
LAPTM4B-204ENST00000619747 KRTAP1-5Q9BYS1 174 aa12.59□□□□□ -0.39
LAPTM4B-204ENST00000619747 SERTAD4-AS1Q5TG53 156 aa12.58□□□□□ -0.4
LAPTM4B-204ENST00000619747 FAM168BA1KXE4 195 aa12.57□□□□□ -0.4
LAPTM4B-204ENST00000619747 DNAH1Q9P2D7 4330 aa12.57□□□□□ -0.4
LAPTM4B-204ENST00000619747 M0R378 163 aa12.56□□□□□ -0.4
LAPTM4B-204ENST00000619747 ERC2-IT1O76042 136 aa12.56□□□□□ -0.4
LAPTM4B-204ENST00000619747 UBE2DNLQ8IWF7 75 aa12.56□□□□□ -0.4
LAPTM4B-204ENST00000619747 CD164Q04900 197 aa12.54□□□□□ -0.4
LAPTM4B-204ENST00000619747 RPL37AP8A6NKH3 93 aa12.53□□□□□ -0.4
LAPTM4B-204ENST00000619747 NKAPP1Q8N9T2 125 aa12.53□□□□□ -0.4
LAPTM4B-204ENST00000619747 OCR1Q9BZK8 76 aa12.53□□□□□ -0.4
LAPTM4B-204ENST00000619747 hDV103S1A0JD37 113 aa12.53□□□□□ -0.4
LAPTM4B-204ENST00000619747 COX7BP24311 80 aa12.53□□□□□ -0.4
LAPTM4B-204ENST00000619747 PRKDCP78527 4128 aaKnown RBP12.52□□□□□ -0.41
LAPTM4B-204ENST00000619747 A8MU10 97 aa12.51□□□□□ -0.41
LAPTM4B-204ENST00000619747 B9D2Q9BPU9 175 aa12.51□□□□□ -0.41
LAPTM4B-204ENST00000619747 DNHD1Q96M86 4753 aa12.5□□□□□ -0.41
LAPTM4B-204ENST00000619747 PDE6GP18545 87 aa12.5□□□□□ -0.41
LAPTM4B-204ENST00000619747 PLECQ15149 4684 aaKnown RBP12.49□□□□□ -0.41
LAPTM4B-204ENST00000619747 C7orf33Q8WU49 177 aa12.49□□□□□ -0.41
LAPTM4B-204ENST00000619747 PSCAO43653 123 aa12.49□□□□□ -0.41
LAPTM4B-204ENST00000619747 ELOF1P60002 83 aaKnown RBP12.49□□□□□ -0.41
LAPTM4B-204ENST00000619747 Q1T7F1 81 aa12.49□□□□□ -0.41
LAPTM4B-204ENST00000619747 APLNQ9ULZ1 77 aa12.49□□□□□ -0.41
LAPTM4B-204ENST00000619747 C1orf64Q8NEQ6 169 aa12.48□□□□□ -0.41
LAPTM4B-204ENST00000619747 MEGF8Q7Z7M0 2845 aa12.48□□□□□ -0.41
LAPTM4B-204ENST00000619747 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.47□□□□□ -0.41
LAPTM4B-204ENST00000619747 IGKV4-1P06312 121 aa12.47□□□□□ -0.41
LAPTM4B-204ENST00000619747 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.47□□□□□ -0.41
LAPTM4B-204ENST00000619747 TRAV22A0A0B4J277 110 aa12.45□□□□□ -0.42
LAPTM4B-204ENST00000619747 IGKV2-24A0A0C4DH68 120 aa12.44□□□□□ -0.42
LAPTM4B-204ENST00000619747 KRTAP7-1Q8IUC3 87 aa12.44□□□□□ -0.42
LAPTM4B-204ENST00000619747 LINC00528Q8N1L1 170 aa12.43□□□□□ -0.42
LAPTM4B-204ENST00000619747 FAM30AQ9NZY2 134 aa12.43□□□□□ -0.42
LAPTM4B-204ENST00000619747 DEFB105AQ8NG35 78 aa12.42□□□□□ -0.42
LAPTM4B-204ENST00000619747 TLX1NBP0CAT3 122 aa12.41□□□□□ -0.42
LAPTM4B-204ENST00000619747 PRR4Q16378 134 aa12.41□□□□□ -0.42
LAPTM4B-204ENST00000619747 MRPL55Q7Z7F7 128 aaKnown RBP12.4□□□□□ -0.42
LAPTM4B-204ENST00000619747 TGP01266 2768 aa12.4□□□□□ -0.43
LAPTM4B-204ENST00000619747 STARD9Q9P2P6 4700 aa12.4□□□□□ -0.43
LAPTM4B-204ENST00000619747 A8MUN3 132 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms