RNA–Protein interactions for RNA: ENST00000618771.1

TRAF4-217, Transcript of TNF receptor associated factor 4, humanhuman

TSL 5 BASIC

Gene TRAF4, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-217ENST00000618771 LINC00483Q53H64 154 aa12.58□□□□□ -0.4
TRAF4-217ENST00000618771 COA6Q5JTJ3 125 aaKnown RBP12.58□□□□□ -0.4
TRAF4-217ENST00000618771 GAGE2AQ6NT46 116 aa12.58□□□□□ -0.4
TRAF4-217ENST00000618771 LITAFQ99732 161 aa12.57□□□□□ -0.4
TRAF4-217ENST00000618771 Q9BRP9 147 aa12.57□□□□□ -0.4
TRAF4-217ENST00000618771 ZNF815PA8K554 130 aa12.56□□□□□ -0.4
TRAF4-217ENST00000618771 TIMM17BO60830 172 aa12.56□□□□□ -0.4
TRAF4-217ENST00000618771 Q8NBF4 154 aa12.56□□□□□ -0.4
TRAF4-217ENST00000618771 KRTDAPP60985 99 aa12.55□□□□□ -0.4
TRAF4-217ENST00000618771 C4orf48Q5BLP8 95 aa12.55□□□□□ -0.4
TRAF4-217ENST00000618771 LINC00308Q8TCZ7 52 aa12.55□□□□□ -0.4
TRAF4-217ENST00000618771 SPANXCQ9NY87 97 aa12.54□□□□□ -0.4
TRAF4-217ENST00000618771 IGLV7-46A0A075B6I9 117 aa12.53□□□□□ -0.4
TRAF4-217ENST00000618771 ZNF73O43830 326 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-217ENST00000618771 JOSD1Q15040 202 aaPredicted RBP12.53□□□□□ -0.4
TRAF4-217ENST00000618771 TTTY13Q9BZ97 58 aa12.53□□□□□ -0.4
TRAF4-217ENST00000618771 CBY1Q9Y3M2 126 aa12.52□□□□□ -0.41
TRAF4-217ENST00000618771 TPRXLQ17RH7 258 aa12.5□□□□□ -0.41
TRAF4-217ENST00000618771 IGLV9-49A0A0B4J1Y8 123 aa12.49□□□□□ -0.41
TRAF4-217ENST00000618771 C20orf202A1L168 122 aa12.49□□□□□ -0.41
TRAF4-217ENST00000618771 MOBPQ13875 183 aa12.49□□□□□ -0.41
TRAF4-217ENST00000618771 OR13C6PQ8NH95 151 aa12.49□□□□□ -0.41
TRAF4-217ENST00000618771 FAT4Q6V0I7 4981 aa12.47□□□□□ -0.41
TRAF4-217ENST00000618771 HINT1P49773 126 aaPredicted RBP12.47□□□□□ -0.41
TRAF4-217ENST00000618771 SPINK1P00995 79 aa12.46□□□□□ -0.41
TRAF4-217ENST00000618771 CDIP1Q9H305 208 aa12.46□□□□□ -0.41
TRAF4-217ENST00000618771 SPANXDQ9BXN6 97 aa12.45□□□□□ -0.42
TRAF4-217ENST00000618771 LCE2AQ5TA79 106 aaPredicted RBP12.44□□□□□ -0.42
TRAF4-217ENST00000618771 SCGB1D4Q6XE38 83 aa12.44□□□□□ -0.42
TRAF4-217ENST00000618771 FP248Q71RG6 208 aaPredicted RBP12.44□□□□□ -0.42
TRAF4-217ENST00000618771 SSBP3-AS1Q7Z2R9 100 aa12.44□□□□□ -0.42
TRAF4-217ENST00000618771 ANKRD39Q53RE8 183 aa12.43□□□□□ -0.42
TRAF4-217ENST00000618771 LINC00518Q8N0U6 118 aa12.42□□□□□ -0.42
TRAF4-217ENST00000618771 ATOH7Q8N100 152 aa12.42□□□□□ -0.42
TRAF4-217ENST00000618771 ST20-AS1Q8NBB2 130 aa12.42□□□□□ -0.42
TRAF4-217ENST00000618771 C5orf52A6NGY3 159 aa12.4□□□□□ -0.42
TRAF4-217ENST00000618771 AKR1D1P51857 326 aa12.39□□□□□ -0.43
TRAF4-217ENST00000618771 C9orf153Q5TBE3 101 aa12.39□□□□□ -0.43
TRAF4-217ENST00000618771 RPS29P62273 56 aaKnown RBP12.37□□□□□ -0.43
TRAF4-217ENST00000618771 COPS9Q8WXC6 57 aa12.37□□□□□ -0.43
TRAF4-217ENST00000618771 DHRS4-AS1Q9P1J3 65 aa12.37□□□□□ -0.43
TRAF4-217ENST00000618771 C6orf99Q4VX62 202 aa12.36□□□□□ -0.43
TRAF4-217ENST00000618771 PCP2Q8IVA1 136 aa12.36□□□□□ -0.43
TRAF4-217ENST00000618771 IFITM1P13164 125 aa12.35□□□□□ -0.43
TRAF4-217ENST00000618771 ELOF1P60002 83 aaKnown RBP12.35□□□□□ -0.43
TRAF4-217ENST00000618771 COX7BP24311 80 aa12.34□□□□□ -0.43
TRAF4-217ENST00000618771 Q6ZVH6 145 aa12.34□□□□□ -0.43
TRAF4-217ENST00000618771 KRTAP9-6A0A140TA67 174 aa12.33□□□□□ -0.44
TRAF4-217ENST00000618771 Q8N377 158 aa12.33□□□□□ -0.44
TRAF4-217ENST00000618771 SPRR1BP22528 89 aa12.32□□□□□ -0.44
TRAF4-217ENST00000618771 SNRPEP62304 92 aaKnown RBP12.32□□□□□ -0.44
TRAF4-217ENST00000618771 KRTAP13-3Q3SY46 172 aa12.31□□□□□ -0.44
TRAF4-217ENST00000618771 SLC25A34Q6PIV7 304 aa12.31□□□□□ -0.44
TRAF4-217ENST00000618771 HIST3H2BBQ8N257 126 aa12.31□□□□□ -0.44
TRAF4-217ENST00000618771 SLC25A20O43772 301 aa12.3□□□□□ -0.44
TRAF4-217ENST00000618771 S100A2P29034 98 aa12.3□□□□□ -0.44
TRAF4-217ENST00000618771 MUSTN1Q8IVN3 82 aa12.3□□□□□ -0.44
TRAF4-217ENST00000618771 HIST1H2BLQ99880 126 aa12.3□□□□□ -0.44
TRAF4-217ENST00000618771 MUC17Q685J3 4493 aa12.3□□□□□ -0.44
TRAF4-217ENST00000618771 S100A1P23297 94 aa12.29□□□□□ -0.44
TRAF4-217ENST00000618771 TRBV7-6A0A0J9YX20 115 aa12.28□□□□□ -0.44
TRAF4-217ENST00000618771 A6NDN8 102 aa12.28□□□□□ -0.44
TRAF4-217ENST00000618771 LAMTOR3Q9UHA4 124 aa12.27□□□□□ -0.45
TRAF4-217ENST00000618771 A0A1B0GWB2 263 aa12.24□□□□□ -0.45
TRAF4-217ENST00000618771 HSBP1L1C9JCN9 74 aa12.24□□□□□ -0.45
TRAF4-217ENST00000618771 TAL2Q16559 108 aa12.24□□□□□ -0.45
TRAF4-217ENST00000618771 DEFB105AQ8NG35 78 aa12.23□□□□□ -0.45
TRAF4-217ENST00000618771 TRAV13-2A0A0B4J235 113 aa12.22□□□□□ -0.45
TRAF4-217ENST00000618771 S100A6P06703 90 aa12.22□□□□□ -0.45
TRAF4-217ENST00000618771 Q1RN00 199 aa12.21□□□□□ -0.45
TRAF4-217ENST00000618771 TEX49A0A1B0GTD5 131 aa12.2□□□□□ -0.46
TRAF4-217ENST00000618771 A4D1N5 150 aa12.18□□□□□ -0.46
TRAF4-217ENST00000618771 HRCT1Q6UXD1 115 aa12.18□□□□□ -0.46
TRAF4-217ENST00000618771 SMIM11BQ8TCY0 68 aa12.18□□□□□ -0.46
TRAF4-217ENST00000618771 LIMD2Q9BT23 127 aa12.18□□□□□ -0.46
TRAF4-217ENST00000618771 IGLV5-48A0A075B6I7 105 aa12.15□□□□□ -0.46
TRAF4-217ENST00000618771 ASB16-AS1Q495Z4 193 aa12.15□□□□□ -0.46
TRAF4-217ENST00000618771 LINC01547P58512 204 aaPredicted RBP12.14□□□□□ -0.47
TRAF4-217ENST00000618771 PRO1933Q9H354 126 aa12.14□□□□□ -0.47
TRAF4-217ENST00000618771 NHP2Q9NX24 153 aaKnown RBP12.14□□□□□ -0.47
TRAF4-217ENST00000618771 SMIM29Q86T20 159 aa12.13□□□□□ -0.47
TRAF4-217ENST00000618771 CD164Q04900 197 aa12.12□□□□□ -0.47
TRAF4-217ENST00000618771 SCGB1D1O95968 90 aa12.11□□□□□ -0.47
TRAF4-217ENST00000618771 SEC61BP60468 96 aaKnown RBP12.11□□□□□ -0.47
TRAF4-217ENST00000618771 H7C2G1 150 aa12.08□□□□□ -0.48
TRAF4-217ENST00000618771 VAMP3Q15836 100 aa12.08□□□□□ -0.48
TRAF4-217ENST00000618771 XP32Q5T750 250 aa12.07□□□□□ -0.48
TRAF4-217ENST00000618771 LINC00575Q6W349 94 aa12.04□□□□□ -0.48
TRAF4-217ENST00000618771 A0A0G2JQZ4 141 aa12.03□□□□□ -0.48
TRAF4-217ENST00000618771 COX8AP10176 69 aa12.03□□□□□ -0.48
TRAF4-217ENST00000618771 HIST1H4GQ99525 98 aa12.03□□□□□ -0.48
TRAF4-217ENST00000618771 C12orf57Q99622 126 aa12.02□□□□□ -0.49
TRAF4-217ENST00000618771 Q5XG85 94 aa12.01□□□□□ -0.49
TRAF4-217ENST00000618771 hADV29S1A0JD25 119 aa12□□□□□ -0.49
TRAF4-217ENST00000618771 KRTAP4-1Q9BYQ7 146 aa12□□□□□ -0.49
TRAF4-217ENST00000618771 Q6ZQY7 126 aa11.99□□□□□ -0.49
TRAF4-217ENST00000618771 F8WEM9 126 aa11.98□□□□□ -0.49
TRAF4-217ENST00000618771 DLEU1O43261 78 aa11.98□□□□□ -0.49
TRAF4-217ENST00000618771 C9orf92A6NGG3 77 aa11.97□□□□□ -0.49
TRAF4-217ENST00000618771 BVES-AS1Q5T3Y7 98 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms